Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717191
Identifier: 119717191
GI number: 119717191
Start: 3152502
End: 3152903
Strand: Reverse
Name: 119717191
Synonym: Noca_2967
Alternate gene names: NA
Gene position: 3152903-3152502 (Counterclockwise)
Preceding gene: 119717193
Following gene: 119717188
Centisome position: 63.24
GC content: 70.65
Gene sequence:
>402_bases ATGGGGACCGTCGTCGTAGGGTTCGTGCCCAAGCCGGAGGGAGAGGCCGCGCTGCACAAGGCGGTCGCGGAGGCCAAGCT GCGAGACGCCAAGCTCGTCGTCGTCAACTCCCACCGCGGCGGCCAGGAGTTCGACGGCAGTGCCGCGCTCCAGGCCGAGC GTGACCTGGACTCGGTCCGCAAGGTCCTCGACGAGTCCGGCGTCCCCTACGACATCCGCCAGCTGGTGCGCGGCTTCGAG CCCGCCGAGGACCTGATCAGCATCGCCGAGGCCAACGACGCCGAGCTGATCGTCATCGGTCTGCGGCGCCGCTCGCCGGT CGGCAAGCTGATCCTCGGCAGCAACGCCCAGCGGGTGCTGCTCGACGCGCACTGCCCGGTGCTGGCCGTCAAGGCCGACT GA
Upstream 100 bases:
>100_bases GCGTGTCCTTCCTCCACAGGCTGCGGGCGGTGCCGCCGATCGGTTACGGTGCGAGCAGTGGGCAACCGGCCCACATCAGC ACCTGGGACAGGGAGTGTCG
Downstream 100 bases:
>100_bases CCGACGCCAGGCCCGCGACCGGGACCCTAGCCACGGCCGGCGAGCGACTCCAACCGGTCCACGGCGAGCGGGGCGCCGCC GTCCTGCGCCATCGCGGCCG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA-Like Protein; Universal Stress Family Domain-Containing Protein; Universal Stress Protein Family Protein; Uspa Domain-Containing Protein; Uspa Domain Protein; Universal Stress Protein; Stress Protein
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGTVVVGFVPKPEGEAALHKAVAEAKLRDAKLVVVNSHRGGQEFDGSAALQAERDLDSVRKVLDESGVPYDIRQLVRGFE PAEDLISIAEANDAELIVIGLRRRSPVGKLILGSNAQRVLLDAHCPVLAVKAD
Sequences:
>Translated_133_residues MGTVVVGFVPKPEGEAALHKAVAEAKLRDAKLVVVNSHRGGQEFDGSAALQAERDLDSVRKVLDESGVPYDIRQLVRGFE PAEDLISIAEANDAELIVIGLRRRSPVGKLILGSNAQRVLLDAHCPVLAVKAD >Mature_132_residues GTVVVGFVPKPEGEAALHKAVAEAKLRDAKLVVVNSHRGGQEFDGSAALQAERDLDSVRKVLDESGVPYDIRQLVRGFEP AEDLISIAEANDAELIVIGLRRRSPVGKLILGSNAQRVLLDAHCPVLAVKAD
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14215; Mature: 14084
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVVVGFVPKPEGEAALHKAVAEAKLRDAKLVVVNSHRGGQEFDGSAALQAERDLDSVR CCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEHHHCCHHHHH KVLDESGVPYDIRQLVRGFEPAEDLISIAEANDAELIVIGLRRRSPVGKLILGSNAQRVL HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCEEE LDAHCPVLAVKAD EECCCCEEEEECC >Mature Secondary Structure GTVVVGFVPKPEGEAALHKAVAEAKLRDAKLVVVNSHRGGQEFDGSAALQAERDLDSVR CEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEHHHCCHHHHH KVLDESGVPYDIRQLVRGFEPAEDLISIAEANDAELIVIGLRRRSPVGKLILGSNAQRVL HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCEEE LDAHCPVLAVKAD EECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA