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The map label for this gene is 119717188

Identifier: 119717188

GI number: 119717188

Start: 3150053

End: 3150619

Strand: Reverse

Name: 119717188

Synonym: Noca_2964

Alternate gene names: NA

Gene position: 3150619-3150053 (Counterclockwise)

Preceding gene: 119717191

Following gene: 119717187

Centisome position: 63.19

GC content: 71.96

Gene sequence:

>567_bases
ATGGCCTTCCACATCACCGGCGAGCCGGCGAGCGACTCCGTCTTGGACCAGCATCCGTTCGCGATCATCGCCGGGATGAT
GCTCGACCAGCAGTACCCGATGGAGCACGCCTTCCGGGGCCCGGCCAAGGTCCTGGACCGGTTCGGCAGCCTGGAGCCGG
CGCGGATCGCGGCCGCGGACCCCGAGGAGTTCGCAGCCCTGTGTGCGAGCCCGCCGGCGATCCACCGCTTCCCGGGCTCG
ATGGCGGCCCGGCTTCAAGCGCTGGCGGCGCTCGTCGAGGAGCGGTACGACGGTCACGCGGAGCGACTGTGGGAGGAGGC
GACCACCGGCAAGGAGCTGCTCGCCCGGGTGCTGGAGCTGCCCGGCTTCGGCAAGCAGAAGGCGCAGATCTTCGTCGCCC
TGGTCGCCAAGCAGCTCGGCGTCCGCCCCGACGGGTGGGAGGCCGCGGTCGGTGCCTACGCCGAGCCGGGCTACCGCTCC
GTGGCCGACGTCGTCGACGCCGACTCGCTGCAGAAGGTCCGCGACCACAAGAAGCAGCAGAAGGCCGCCGCCCGGACCGC
TGGCTAG

Upstream 100 bases:

>100_bases
GCGCGACGGATCGGGCGCGGGCCGTCTGCACGTACGGCCGTTTCATGTCAGTGACACTAATCTGAAATGTGGCCGGGGTC
CAGGGGTGGATACTGCGGCC

Downstream 100 bases:

>100_bases
ACCACCTCCGTTCGGCTACTCGCGAGTCACCCGGATCTGGACCTACCGTCACGAACGGCGAGCCAGAGATCGAATGAGTT
CCCCTCCCTATGGATCCATC

Product: HhH-GPD family protein

Products: NA

Alternate protein names: HhH-GPD Protein; HhH-GPD; Hhh-Gpd Family DNA Repair Protein; Base Excision DNA Repair Protein HhH-GPD Family Protein; HhH-GPD Family Base Excision DNA Repair Protein; HhH-GPD Superfamily Base Excision DNA Repair Protein

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAFHITGEPASDSVLDQHPFAIIAGMMLDQQYPMEHAFRGPAKVLDRFGSLEPARIAAADPEEFAALCASPPAIHRFPGS
MAARLQALAALVEERYDGHAERLWEEATTGKELLARVLELPGFGKQKAQIFVALVAKQLGVRPDGWEAAVGAYAEPGYRS
VADVVDADSLQKVRDHKKQQKAAARTAG

Sequences:

>Translated_188_residues
MAFHITGEPASDSVLDQHPFAIIAGMMLDQQYPMEHAFRGPAKVLDRFGSLEPARIAAADPEEFAALCASPPAIHRFPGS
MAARLQALAALVEERYDGHAERLWEEATTGKELLARVLELPGFGKQKAQIFVALVAKQLGVRPDGWEAAVGAYAEPGYRS
VADVVDADSLQKVRDHKKQQKAAARTAG
>Mature_187_residues
AFHITGEPASDSVLDQHPFAIIAGMMLDQQYPMEHAFRGPAKVLDRFGSLEPARIAAADPEEFAALCASPPAIHRFPGSM
AARLQALAALVEERYDGHAERLWEEATTGKELLARVLELPGFGKQKAQIFVALVAKQLGVRPDGWEAAVGAYAEPGYRSV
ADVVDADSLQKVRDHKKQQKAAARTAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20330; Mature: 20199

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFHITGEPASDSVLDQHPFAIIAGMMLDQQYPMEHAFRGPAKVLDRFGSLEPARIAAAD
CEEEECCCCCCCCHHHHCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCCHHCCCC
PEEFAALCASPPAIHRFPGSMAARLQALAALVEERYDGHAERLWEEATTGKELLARVLEL
HHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHC
PGFGKQKAQIFVALVAKQLGVRPDGWEAAVGAYAEPGYRSVADVVDADSLQKVRDHKKQQ
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
KAAARTAG
HHHHHCCC
>Mature Secondary Structure 
AFHITGEPASDSVLDQHPFAIIAGMMLDQQYPMEHAFRGPAKVLDRFGSLEPARIAAAD
EEEECCCCCCCCHHHHCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCCHHCCCC
PEEFAALCASPPAIHRFPGSMAARLQALAALVEERYDGHAERLWEEATTGKELLARVLEL
HHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHC
PGFGKQKAQIFVALVAKQLGVRPDGWEAAVGAYAEPGYRSVADVVDADSLQKVRDHKKQQ
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
KAAARTAG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA