Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717106
Identifier: 119717106
GI number: 119717106
Start: 3064581
End: 3065462
Strand: Reverse
Name: 119717106
Synonym: Noca_2882
Alternate gene names: NA
Gene position: 3065462-3064581 (Counterclockwise)
Preceding gene: 119717107
Following gene: 119717101
Centisome position: 61.48
GC content: 72.11
Gene sequence:
>882_bases ATGATCTCGCCCCCAGTAGGCCTGCACCCCGTGGCCTCTGTGGCGGCGCCGAACGGACCCCCCATGACCGCACGCGCACT TCTCATCCGTGGGCTGATCGCCGGCCTCGTGGCCGGCATCGCCACCTTCCTCGTCGCCTACACCGCCGGCGAGCCCCAGG TCAGGACGGCCATCGCCCTCGAGCAGCCCCGTGCTGGCGTCGAGGCTCCGGGCGACGCCCCGCCCGCCGAGGACGGTCAC GCCCACACGCACCGCCACGGCGACGAAGCCACCGCCGAGGAAGGCGCCAGGACCGAGGTGTCGCGCGACAACCAGGAGAC CTGGGGCCTGCTCACCGGCACCCTGACCGTGGGCCTCGCTCTCGGCGGCATCGTCGCCCTCGTCGCCGCCGCCACCATCG GCCACATCGGCCGCCTGCTGCCCGGCCAGTCGACCGCTCTCGTCACGCTGCTCGGGTTCGTCTCGTTCGCACTGGTGCCG TTCCTGAAGTACCCCGCCACGCCACCGGCGGTCGGCGACAGCGAGACGATCGGCGACCGGACCGCGCTCTACTTCGGGTT CGTCCTCGTCTCCCTGGTCGCGGCAGTCGCGGCGAGCTACGGCGCCTTGAGGCTGCGTGAGCGCATCGGCACCTACGGCG GTGTGGTCGCAGGCGTCGCGGCGTACCTGCTCGTCGTGGTGGTCGCCGGCCAGGCCTTCGGCACGGTCAACGAGGTGGGC GACTTCCCGGCCGACACGCTGTGGTTCTTCCGACGCGCATCGCTGATCACCCTCGCCACGACCTGGGGTGTCACCGGCGT CGTGCTCACCGGCCTCGTGACGCGGCTCTACGCCGCCGAGACGGCGGACGCCGAGCGACGTCAGCTGGCTGACAGTCTCT GA
Upstream 100 bases:
>100_bases GTCACCTGCTGGGCTACCCCTGCCACTGACGCCGCGCCCGGAATGACTTCCGGGCGGCCTCTTCCGACCCGTCCCTGACG GGCGCGACGCATCCCGTCAC
Downstream 100 bases:
>100_bases CGCGCTATCGAGCTGCCTGCCGCAGCACCCACGCGAGGGCGTCGTCGACGGCATCGACCGTCGGCACTCCGTCCCCGGCA TTCGGGCGCCGCACGACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MISPPVGLHPVASVAAPNGPPMTARALLIRGLIAGLVAGIATFLVAYTAGEPQVRTAIALEQPRAGVEAPGDAPPAEDGH AHTHRHGDEATAEEGARTEVSRDNQETWGLLTGTLTVGLALGGIVALVAAATIGHIGRLLPGQSTALVTLLGFVSFALVP FLKYPATPPAVGDSETIGDRTALYFGFVLVSLVAAVAASYGALRLRERIGTYGGVVAGVAAYLLVVVVAGQAFGTVNEVG DFPADTLWFFRRASLITLATTWGVTGVVLTGLVTRLYAAETADAERRQLADSL
Sequences:
>Translated_293_residues MISPPVGLHPVASVAAPNGPPMTARALLIRGLIAGLVAGIATFLVAYTAGEPQVRTAIALEQPRAGVEAPGDAPPAEDGH AHTHRHGDEATAEEGARTEVSRDNQETWGLLTGTLTVGLALGGIVALVAAATIGHIGRLLPGQSTALVTLLGFVSFALVP FLKYPATPPAVGDSETIGDRTALYFGFVLVSLVAAVAASYGALRLRERIGTYGGVVAGVAAYLLVVVVAGQAFGTVNEVG DFPADTLWFFRRASLITLATTWGVTGVVLTGLVTRLYAAETADAERRQLADSL >Mature_293_residues MISPPVGLHPVASVAAPNGPPMTARALLIRGLIAGLVAGIATFLVAYTAGEPQVRTAIALEQPRAGVEAPGDAPPAEDGH AHTHRHGDEATAEEGARTEVSRDNQETWGLLTGTLTVGLALGGIVALVAAATIGHIGRLLPGQSTALVTLLGFVSFALVP FLKYPATPPAVGDSETIGDRTALYFGFVLVSLVAAVAASYGALRLRERIGTYGGVVAGVAAYLLVVVVAGQAFGTVNEVG DFPADTLWFFRRASLITLATTWGVTGVVLTGLVTRLYAAETADAERRQLADSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30110; Mature: 30110
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPPVGLHPVASVAAPNGPPMTARALLIRGLIAGLVAGIATFLVAYTAGEPQVRTAIAL CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EQPRAGVEAPGDAPPAEDGHAHTHRHGDEATAEEGARTEVSRDNQETWGLLTGTLTVGLA HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHH LGGIVALVAAATIGHIGRLLPGQSTALVTLLGFVSFALVPFLKYPATPPAVGDSETIGDR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH TALYFGFVLVSLVAAVAASYGALRLRERIGTYGGVVAGVAAYLLVVVVAGQAFGTVNEVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC DFPADTLWFFRRASLITLATTWGVTGVVLTGLVTRLYAAETADAERRQLADSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MISPPVGLHPVASVAAPNGPPMTARALLIRGLIAGLVAGIATFLVAYTAGEPQVRTAIAL CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EQPRAGVEAPGDAPPAEDGHAHTHRHGDEATAEEGARTEVSRDNQETWGLLTGTLTVGLA HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHH LGGIVALVAAATIGHIGRLLPGQSTALVTLLGFVSFALVPFLKYPATPPAVGDSETIGDR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH TALYFGFVLVSLVAAVAASYGALRLRERIGTYGGVVAGVAAYLLVVVVAGQAFGTVNEVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC DFPADTLWFFRRASLITLATTWGVTGVVLTGLVTRLYAAETADAERRQLADSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA