| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716925
Identifier: 119716925
GI number: 119716925
Start: 2870336
End: 2870845
Strand: Reverse
Name: 119716925
Synonym: Noca_2700
Alternate gene names: NA
Gene position: 2870845-2870336 (Counterclockwise)
Preceding gene: 119716930
Following gene: 119716924
Centisome position: 57.58
GC content: 74.51
Gene sequence:
>510_bases ATGACGGTGGAGGATGCGTCGTTCGGCGAGGGGGCCGAGCGGCCGCGGCCCGGGGAACCGCCGACCATCGGGACGTTCGC CTCTGACCGCCGCGCCGGGCGGTCGACGACCCTGGGCATCGTCGACCCGGACCAACCCGGAGTCGGTGTGTGGGAGGGAG TGCGGGTGACGAGCCAGATCGTGTGCGTGCCGGTCACGCCGACCGGCGCGGTCGATCGGCGCTGGGGCAAGGCCGCGCAG GTCGCCTTGGCGCGGCTGGAGGACGGTGCCGTCGTGGACTGGCGGGTCGTGGACGTCGGCTGGGACCGGCTGCACGACGT GGGCGGAGAGGGCCAGCACCACGCGCGGATCGTCCGGTTCTTGCGCGACCACGGCGTGACCGTCGTGGTGGCCGACGGGA TGGGTCCGCCCATGCAGAACACGCTGGCCAGGCTCGGCGTGCGACTCGTGCTCGGCGTGACCGGCGATGCCCGTGCCGCG GCTGCGAGCGGAGGTCCGGGCGCGCCGTGA
Upstream 100 bases:
>100_bases GTGTGGAGGATGCGCACACCGCCACGCTAGGAGCGGGCGCCGACATCGCCGCGGGGGCGCGCCGAGGAGGGCGGGCCAGA ACGGTCGTGAGCAGGTGAAC
Downstream 100 bases:
>100_bases GCCTTCCGGGGTGACGCACGTTCGGACCTGACCTGCTCGCGGGTATCCGCGCGCGAGCAGACGACACGAACGAGTCATGG ACGCGATCTGACGGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTVEDASFGEGAERPRPGEPPTIGTFASDRRAGRSTTLGIVDPDQPGVGVWEGVRVTSQIVCVPVTPTGAVDRRWGKAAQ VALARLEDGAVVDWRVVDVGWDRLHDVGGEGQHHARIVRFLRDHGVTVVVADGMGPPMQNTLARLGVRLVLGVTGDARAA AASGGPGAP
Sequences:
>Translated_169_residues MTVEDASFGEGAERPRPGEPPTIGTFASDRRAGRSTTLGIVDPDQPGVGVWEGVRVTSQIVCVPVTPTGAVDRRWGKAAQ VALARLEDGAVVDWRVVDVGWDRLHDVGGEGQHHARIVRFLRDHGVTVVVADGMGPPMQNTLARLGVRLVLGVTGDARAA AASGGPGAP >Mature_168_residues TVEDASFGEGAERPRPGEPPTIGTFASDRRAGRSTTLGIVDPDQPGVGVWEGVRVTSQIVCVPVTPTGAVDRRWGKAAQV ALARLEDGAVVDWRVVDVGWDRLHDVGGEGQHHARIVRFLRDHGVTVVVADGMGPPMQNTLARLGVRLVLGVTGDARAAA ASGGPGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17627; Mature: 17496
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEDASFGEGAERPRPGEPPTIGTFASDRRAGRSTTLGIVDPDQPGVGVWEGVRVTSQI CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE VCVPVTPTGAVDRRWGKAAQVALARLEDGAVVDWRVVDVGWDRLHDVGGEGQHHARIVRF EEEECCCCCCCHHHCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHCCCCCHHHHHHHHH LRDHGVTVVVADGMGPPMQNTLARLGVRLVLGVTGDARAAAASGGPGAP HHHCCCEEEEECCCCCCHHHHHHHHCEEEEEECCCCCCEECCCCCCCCC >Mature Secondary Structure TVEDASFGEGAERPRPGEPPTIGTFASDRRAGRSTTLGIVDPDQPGVGVWEGVRVTSQI CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE VCVPVTPTGAVDRRWGKAAQVALARLEDGAVVDWRVVDVGWDRLHDVGGEGQHHARIVRF EEEECCCCCCCHHHCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHCCCCCHHHHHHHHH LRDHGVTVVVADGMGPPMQNTLARLGVRLVLGVTGDARAAAASGGPGAP HHHCCCEEEEECCCCCCHHHHHHHHCEEEEEECCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA