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The map label for this gene is cobT [H]

Identifier: 119716738

GI number: 119716738

Start: 2679082

End: 2680101

Strand: Reverse

Name: cobT [H]

Synonym: Noca_2512

Alternate gene names: 119716738

Gene position: 2680101-2679082 (Counterclockwise)

Preceding gene: 119716739

Following gene: 119716737

Centisome position: 53.75

GC content: 77.06

Gene sequence:

>1020_bases
ATGCGCGCACCCTCCGCCGACGTCGCGGCCCGCGCCGCGGCCCGCCTCGCCGACCTGGCCACCCCTCCCGGAGCGCTCGG
CCGCCTCGGCGACCTCGGCGTCTGGCTCTCGGCCTGCCAGGGCGAGGTGCCGCCGCGCGAGCTCGCGCACGTCCGCCTGG
TGATCTTCGCGGGCGACCACGGCATCGCGCGCCACGGCGTGTCGGCGTACCCGCCCGCGATCACCGCCGCCATGGTGCGG
ACCTTCGTCGCCGGCCGCGCGGGCGTCAACGCGCTCGCGGGTGCGCACGGGGTCGCCGTCCGGGTCCTCGACCTGGGCGT
CGACGACGACCTGGCCGACGTGCCGGACGACGTACGCCGGTTCAAGGTGCGGCGCTCCTCGGGCGCGATCCACCTGGAGG
ACGCGCTCACCGCCGAGGAGACCCGGACCGCGCTCGACGCCGGCGCCACGGTCGCCCGCGAGGAGATCGCCGCCGGGGCG
CAGCTGCTGCTCAGCGGCGACATGGGGATCGGCAACACCACGCCGGCGGCGGCCCTGGTGGCGGCCGGTCTCGGGCTCCC
GGCCAGTGAGGTCACCGGGCGCGGCACCGGCATCGACGTGCCCACCCTCGCGCACAAGCAGGCCCTCATCGACCGGGCCC
TGCGCCGCGCCGGAACCCGCGTCGACGACCCGGTCGAGGCGCTCGCGGCGCTCGGCAGCGCCGACCTCGCCGCCAGCACC
GGCTACCTGCTCGAGGCCGCGCGTCAGGGCGTTCCAGCTGTCCTCGACGGGCTGATGGCGGTCGCGTGCGCGCTCACGGC
CGACCGGATCGATCCGGGTGCGTCGACCTGGTACGCCGCCGGCCACCGCTCCACGGAACCGGCCCAGTCCCTTGCCCTGG
CCAAGCTCGGTCTCGAGCCGGCCCTCGACCTCGGGCTGCGGCTCGGCGAGGGCAGCGGTGCGGTCGCGGCAGTGCCGGTG
CTGCGCAGTGCGGTCGCCCTGCTGCGCGACGTGGGCCTGCTCAGCGAGCTCGATGCGTGA

Upstream 100 bases:

>100_bases
TCGCCGCCGCCCGGCCGGACCTGCCGATCGTGCACCTGCGCAGCCGGCCCGAGGGCGACCGCTGGGTCCGAGAGGTGCTC
GCGCCGTTAGCCTGACGGCC

Downstream 100 bases:

>100_bases
CGCCTGGCGGTTCGCGGTCGGGACCCTGACCGCCCTGCCGGTGCGCCCACCGACGCGGGTGGACCGGGACACGGCTCGTC
GCGCGATGCTGCTGGCCCCC

Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Products: NA

Alternate protein names: NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MRAPSADVAARAAARLADLATPPGALGRLGDLGVWLSACQGEVPPRELAHVRLVIFAGDHGIARHGVSAYPPAITAAMVR
TFVAGRAGVNALAGAHGVAVRVLDLGVDDDLADVPDDVRRFKVRRSSGAIHLEDALTAEETRTALDAGATVAREEIAAGA
QLLLSGDMGIGNTTPAAALVAAGLGLPASEVTGRGTGIDVPTLAHKQALIDRALRRAGTRVDDPVEALAALGSADLAAST
GYLLEAARQGVPAVLDGLMAVACALTADRIDPGASTWYAAGHRSTEPAQSLALAKLGLEPALDLGLRLGEGSGAVAAVPV
LRSAVALLRDVGLLSELDA

Sequences:

>Translated_339_residues
MRAPSADVAARAAARLADLATPPGALGRLGDLGVWLSACQGEVPPRELAHVRLVIFAGDHGIARHGVSAYPPAITAAMVR
TFVAGRAGVNALAGAHGVAVRVLDLGVDDDLADVPDDVRRFKVRRSSGAIHLEDALTAEETRTALDAGATVAREEIAAGA
QLLLSGDMGIGNTTPAAALVAAGLGLPASEVTGRGTGIDVPTLAHKQALIDRALRRAGTRVDDPVEALAALGSADLAAST
GYLLEAARQGVPAVLDGLMAVACALTADRIDPGASTWYAAGHRSTEPAQSLALAKLGLEPALDLGLRLGEGSGAVAAVPV
LRSAVALLRDVGLLSELDA
>Mature_339_residues
MRAPSADVAARAAARLADLATPPGALGRLGDLGVWLSACQGEVPPRELAHVRLVIFAGDHGIARHGVSAYPPAITAAMVR
TFVAGRAGVNALAGAHGVAVRVLDLGVDDDLADVPDDVRRFKVRRSSGAIHLEDALTAEETRTALDAGATVAREEIAAGA
QLLLSGDMGIGNTTPAAALVAAGLGLPASEVTGRGTGIDVPTLAHKQALIDRALRRAGTRVDDPVEALAALGSADLAAST
GYLLEAARQGVPAVLDGLMAVACALTADRIDPGASTWYAAGHRSTEPAQSLALAKLGLEPALDLGLRLGEGSGAVAAVPV
LRSAVALLRDVGLLSELDA

Specific function: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) [H]

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobT family [H]

Homologues:

Organism=Escherichia coli, GI1788300, Length=326, Percent_Identity=32.8220858895706, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003200
- InterPro:   IPR023195
- InterPro:   IPR017846 [H]

Pfam domain/function: PF02277 DBI_PRT [H]

EC number: =2.4.2.21 [H]

Molecular weight: Translated: 34199; Mature: 34199

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPSADVAARAAARLADLATPPGALGRLGDLGVWLSACQGEVPPRELAHVRLVIFAGDH
CCCCCHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCCCCHHHHCEEEEEEEECCC
GIARHGVSAYPPAITAAMVRTFVAGRAGVNALAGAHGVAVRVLDLGVDDDLADVPDDVRR
CHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCCHHCCHHHHHH
FKVRRSSGAIHLEDALTAEETRTALDAGATVAREEIAAGAQLLLSGDMGIGNTTPAAALV
HHHHHCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHH
AAGLGLPASEVTGRGTGIDVPTLAHKQALIDRALRRAGTRVDDPVEALAALGSADLAAST
HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
GYLLEAARQGVPAVLDGLMAVACALTADRIDPGASTWYAAGHRSTEPAQSLALAKLGLEP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCH
ALDLGLRLGEGSGAVAAVPVLRSAVALLRDVGLLSELDA
HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAPSADVAARAAARLADLATPPGALGRLGDLGVWLSACQGEVPPRELAHVRLVIFAGDH
CCCCCHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCCCCHHHHCEEEEEEEECCC
GIARHGVSAYPPAITAAMVRTFVAGRAGVNALAGAHGVAVRVLDLGVDDDLADVPDDVRR
CHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCCHHCCHHHHHH
FKVRRSSGAIHLEDALTAEETRTALDAGATVAREEIAAGAQLLLSGDMGIGNTTPAAALV
HHHHHCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHH
AAGLGLPASEVTGRGTGIDVPTLAHKQALIDRALRRAGTRVDDPVEALAALGSADLAAST
HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
GYLLEAARQGVPAVLDGLMAVACALTADRIDPGASTWYAAGHRSTEPAQSLALAKLGLEP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCH
ALDLGLRLGEGSGAVAAVPVLRSAVALLRDVGLLSELDA
HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA