| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716560
Identifier: 119716560
GI number: 119716560
Start: 2489563
End: 2490825
Strand: Reverse
Name: 119716560
Synonym: Noca_2333
Alternate gene names: NA
Gene position: 2490825-2489563 (Counterclockwise)
Preceding gene: 119716562
Following gene: 119716557
Centisome position: 49.96
GC content: 75.85
Gene sequence:
>1263_bases ATGAGCCCCGACCCGATCAAGGTGGATCGCGCCACCGACGCCGAGCGGTACCTCGCCACCGACCACACGGTCTGGTTCGC CGAGGTGCCGAGCGCGCCGACGGAGGTGCAGCTGACCGGGCTCGCGCCCGAGCAGCGCTTCGCCGTCGACCTGGACGGCG CGGACCCGGCGACGTATCCCGGGATCTACGGCGTCTTCCCTCTCACCCTGTCGATCCCCGGCCCCGATGCCGGGGCCCGG CAGGTGCCGTGCGCGGGCCTGACCTGGGTGGGCGTGCACCCCGACCACCGGCGTCGCGGCGTCCTCACGGCGATGCTGCG CCACCACTTCGAGCAGGTGCGGGCCGAGGGCCTGCACCTCTCGGCCCTGCACGCGAGCGAGCCGGCGATCTACGGGCGGC ACGGCTACGGCCTGGCGTCGCTGGAGCTGGAGGTGCGGCTCGGGCGGGGTACGGCGCTGTCCGCGCCCGGCCTCGAGGCG CCCGCGGCCGCGCTCACCACCCGGATGGTCCCGGCCTCGGAGCCCGACGTACCGGCGCGGCTGCGAGCCTGCCACCTCGC CCACGCCGAGCTGGGCACGGTCGTCGGCGAGCCCGGCTACTACCACCAGGTGTGCCTGCAGCTGCCCGAGCACCTGCGCG GCAAGGAGCCGTGGCGGGTGCTGTTCGCGCTGCGCGACGGCGTGGACGTCGGGTTCGCGGCGTTCCGGCGCACCGAGAAG TGGGAGAAGGCGCGGCCGGCCGGGGAGGTGGAGGTGTGGACGGTCGTCGGCGAGCCGGCAGCACGCCTGGCGCTGCTGAG GCGGCTGGTCGACCTGGACCTGATCGCGACCGTGAAGGTCGGCAGCGTCGGCGTCGAGGACCCGCTGCTCTCGTGGCTGG GTGGACCCCGGTCGGCCGCGGACGTGGGGACGTACGACGGCCTGTGGGTGCGCCTCGTCGACCTGCCGGCCGCGCTGCAG GCCCGCGGGTGGAGCGCGGCGTGCGACGTCGTGGTCGAGGTCACCGACACCGCGGCGCCCTGGAACGAGGGCAGGTGGCG GATCCGCGCGGATGCCTCGGGCGAGGCCGTCGTGGAGCGCGCGTCCGGGGACCCGGACCTACGGCTGGATGTCGCGGCGC TGGGCTCGGCGTACCTCGGCGGTGGGAACCTGCTCGCCCGGCACCGGGCGGGCCTGGTGCAGGAGCAGCGGCCCGGCGCG GTGCGCGAGCTGTGGCGGGCCATGCGCACCGATCTCGCGCCGACCGCGGCGGTGGGGTTCTGA
Upstream 100 bases:
>100_bases GCCGCGCGTCCGCCTGCGAGAGCTGGTGCGGCCCGGTCACGGGACACGAGGGTAGTCAAACCGGTTGTTCCTGCCACCGT GCCGAGGGTTTGCTGGGGAC
Downstream 100 bases:
>100_bases GCGGGCGATGACCGTGCCGATGCGCGGGGACTCGGCCACTCGGTGGATGCGTCCGAACTTCGCAGTCGCGCTGCGGGGAG ATACCGGATGCGCGACCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSPDPIKVDRATDAERYLATDHTVWFAEVPSAPTEVQLTGLAPEQRFAVDLDGADPATYPGIYGVFPLTLSIPGPDAGAR QVPCAGLTWVGVHPDHRRRGVLTAMLRHHFEQVRAEGLHLSALHASEPAIYGRHGYGLASLELEVRLGRGTALSAPGLEA PAAALTTRMVPASEPDVPARLRACHLAHAELGTVVGEPGYYHQVCLQLPEHLRGKEPWRVLFALRDGVDVGFAAFRRTEK WEKARPAGEVEVWTVVGEPAARLALLRRLVDLDLIATVKVGSVGVEDPLLSWLGGPRSAADVGTYDGLWVRLVDLPAALQ ARGWSAACDVVVEVTDTAAPWNEGRWRIRADASGEAVVERASGDPDLRLDVAALGSAYLGGGNLLARHRAGLVQEQRPGA VRELWRAMRTDLAPTAAVGF
Sequences:
>Translated_420_residues MSPDPIKVDRATDAERYLATDHTVWFAEVPSAPTEVQLTGLAPEQRFAVDLDGADPATYPGIYGVFPLTLSIPGPDAGAR QVPCAGLTWVGVHPDHRRRGVLTAMLRHHFEQVRAEGLHLSALHASEPAIYGRHGYGLASLELEVRLGRGTALSAPGLEA PAAALTTRMVPASEPDVPARLRACHLAHAELGTVVGEPGYYHQVCLQLPEHLRGKEPWRVLFALRDGVDVGFAAFRRTEK WEKARPAGEVEVWTVVGEPAARLALLRRLVDLDLIATVKVGSVGVEDPLLSWLGGPRSAADVGTYDGLWVRLVDLPAALQ ARGWSAACDVVVEVTDTAAPWNEGRWRIRADASGEAVVERASGDPDLRLDVAALGSAYLGGGNLLARHRAGLVQEQRPGA VRELWRAMRTDLAPTAAVGF >Mature_419_residues SPDPIKVDRATDAERYLATDHTVWFAEVPSAPTEVQLTGLAPEQRFAVDLDGADPATYPGIYGVFPLTLSIPGPDAGARQ VPCAGLTWVGVHPDHRRRGVLTAMLRHHFEQVRAEGLHLSALHASEPAIYGRHGYGLASLELEVRLGRGTALSAPGLEAP AAALTTRMVPASEPDVPARLRACHLAHAELGTVVGEPGYYHQVCLQLPEHLRGKEPWRVLFALRDGVDVGFAAFRRTEKW EKARPAGEVEVWTVVGEPAARLALLRRLVDLDLIATVKVGSVGVEDPLLSWLGGPRSAADVGTYDGLWVRLVDLPAALQA RGWSAACDVVVEVTDTAAPWNEGRWRIRADASGEAVVERASGDPDLRLDVAALGSAYLGGGNLLARHRAGLVQEQRPGAV RELWRAMRTDLAPTAAVGF
Specific function: Unknown
COG id: COG4552
COG function: function code R; Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR022902 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45159; Mature: 45028
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDPIKVDRATDAERYLATDHTVWFAEVPSAPTEVQLTGLAPEQRFAVDLDGADPATYP CCCCCEEEECCCCCHHHEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCC GIYGVFPLTLSIPGPDAGARQVPCAGLTWVGVHPDHRRRGVLTAMLRHHFEQVRAEGLHL CCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEE SALHASEPAIYGRHGYGLASLELEVRLGRGTALSAPGLEAPAAALTTRMVPASEPDVPAR EEEECCCCCEECCCCCCEEEEEEEEEECCCCEECCCCCCCCHHHHHHCCCCCCCCCCCHH LRACHLAHAELGTVVGEPGYYHQVCLQLPEHLRGKEPWRVLFALRDGVDVGFAAFRRTEK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH WEKARPAGEVEVWTVVGEPAARLALLRRLVDLDLIATVKVGSVGVEDPLLSWLGGPRSAA HHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCC DVGTYDGLWVRLVDLPAALQARGWSAACDVVVEVTDTAAPWNEGRWRIRADASGEAVVER CCCCCCCEEEEEEECCHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEE ASGDPDLRLDVAALGSAYLGGGNLLARHRAGLVQEQRPGAVRELWRAMRTDLAPTAAVGF CCCCCCCEEEHHHHCCHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure SPDPIKVDRATDAERYLATDHTVWFAEVPSAPTEVQLTGLAPEQRFAVDLDGADPATYP CCCCEEEECCCCCHHHEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCC GIYGVFPLTLSIPGPDAGARQVPCAGLTWVGVHPDHRRRGVLTAMLRHHFEQVRAEGLHL CCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEE SALHASEPAIYGRHGYGLASLELEVRLGRGTALSAPGLEAPAAALTTRMVPASEPDVPAR EEEECCCCCEECCCCCCEEEEEEEEEECCCCEECCCCCCCCHHHHHHCCCCCCCCCCCHH LRACHLAHAELGTVVGEPGYYHQVCLQLPEHLRGKEPWRVLFALRDGVDVGFAAFRRTEK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH WEKARPAGEVEVWTVVGEPAARLALLRRLVDLDLIATVKVGSVGVEDPLLSWLGGPRSAA HHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCC DVGTYDGLWVRLVDLPAALQARGWSAACDVVVEVTDTAAPWNEGRWRIRADASGEAVVER CCCCCCCEEEEEEECCHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEE ASGDPDLRLDVAALGSAYLGGGNLLARHRAGLVQEQRPGAVRELWRAMRTDLAPTAAVGF CCCCCCCEEEHHHHCCHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]