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The map label for this gene is yjgF [C]

Identifier: 119716562

GI number: 119716562

Start: 2491989

End: 2492372

Strand: Reverse

Name: yjgF [C]

Synonym: Noca_2335

Alternate gene names: 119716562

Gene position: 2492372-2491989 (Counterclockwise)

Preceding gene: 119716563

Following gene: 119716560

Centisome position: 49.99

GC content: 73.96

Gene sequence:

>384_bases
ATGACCCGCACCTCGGCCCGCTCCGGATCGCCCTTCGAGTCCTCCATCGGCTTCAGCCGCGCGGTCCGCGTCGGCTCGGT
CGTTGCGGTCAGCGGCACCGCGCCGGTGTGGCCGGACGGCTCGGTCGACCCCGACCCCGCCGTCCAGGCCCGCCGCTGCT
GGGAGATCTGCCTGGCTGCGTTGACCGAGCTCGGCGGGTCGGTCGGCGACGTGGTGCGCACCCGGCAGTACGTCGTCTCC
GCCGCGGACGGGGACGCGATCGGCGCCGTGCACGGGGAGGTGTTCGGCGACGTGCAGCCCGCCTCGACCATGGTCGTCGT
GGCCGGCCTGCTCGACCCGCGCTGGAAGGTCGAGGTCGAGCTGGACGCGGTGCTCGACTCCTAA

Upstream 100 bases:

>100_bases
GCTCCCGGGCCACCGGCCTCCTCGACCCGGCCGCCGGGTCCGCGGACCCGGCGGGCCAGTGCCGGGACGACTGACCTCGC
GCCCGTCCTAGGCTGCGGCC

Downstream 100 bases:

>100_bases
CCGCGCTCGATCTCGAGGTCGAGCCAGCGCGCGAGATCGTCGATCTCGGCCTCGACCGCGGCGCGGATCTCGGGCGCGAA
CGGCTGGTCCTCGTGGAGCG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTRTSARSGSPFESSIGFSRAVRVGSVVAVSGTAPVWPDGSVDPDPAVQARRCWEICLAALTELGGSVGDVVRTRQYVVS
AADGDAIGAVHGEVFGDVQPASTMVVVAGLLDPRWKVEVELDAVLDS

Sequences:

>Translated_127_residues
MTRTSARSGSPFESSIGFSRAVRVGSVVAVSGTAPVWPDGSVDPDPAVQARRCWEICLAALTELGGSVGDVVRTRQYVVS
AADGDAIGAVHGEVFGDVQPASTMVVVAGLLDPRWKVEVELDAVLDS
>Mature_126_residues
TRTSARSGSPFESSIGFSRAVRVGSVVAVSGTAPVWPDGSVDPDPAVQARRCWEICLAALTELGGSVGDVVRTRQYVVSA
ADGDAIGAVHGEVFGDVQPASTMVVVAGLLDPRWKVEVELDAVLDS

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13170; Mature: 13039

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTSARSGSPFESSIGFSRAVRVGSVVAVSGTAPVWPDGSVDPDPAVQARRCWEICLAA
CCCCCCCCCCCCHHHCCHHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LTELGGSVGDVVRTRQYVVSAADGDAIGAVHGEVFGDVQPASTMVVVAGLLDPRWKVEVE
HHHCCCCHHHHHHHHHHEEECCCCCEEEEECCHHHCCCCCCCCEEEEEECCCCCEEEEEE
LDAVLDS
EEEEECC
>Mature Secondary Structure 
TRTSARSGSPFESSIGFSRAVRVGSVVAVSGTAPVWPDGSVDPDPAVQARRCWEICLAA
CCCCCCCCCCCHHHCCHHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LTELGGSVGDVVRTRQYVVSAADGDAIGAVHGEVFGDVQPASTMVVVAGLLDPRWKVEVE
HHHCCCCHHHHHHHHHHEEECCCCCEEEEECCHHHCCCCCCCCEEEEEECCCCCEEEEEE
LDAVLDS
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953; 2199329 [H]