| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716512
Identifier: 119716512
GI number: 119716512
Start: 2435055
End: 2435384
Strand: Reverse
Name: 119716512
Synonym: Noca_2285
Alternate gene names: NA
Gene position: 2435384-2435055 (Counterclockwise)
Preceding gene: 119716513
Following gene: 119716511
Centisome position: 48.85
GC content: 63.03
Gene sequence:
>330_bases ATGAAGGTCTACATAGACAGCGCTCCGGAGAACATGGTCGACGATTTGGCCCTGGACGCTGAGGGTGTCTTGGAAGAGCG CTGGAACGGGTGGGTGCGCCCCATCGCGACCGCAGAGGCGCTCGGCGAGTTCCTCCACGCCTGGCGGGCCAACGACCCCA ACGGCATTTGGGGCTACGTCACCGAGGTTGGCGACACGCTCGTCTGCACCCGGTCCGACGCCGACGACTACGTCGACGAG TTTCCAAAGATTGGTACCACCGCTGACGGCCGAGCGGTTTACGACCTCTCAGGTTGGGTCTGGGTGCTCCCCCAAGACAA TGACGAGTGA
Upstream 100 bases:
>100_bases AGCACGGAAGGCAAGATCATGACGACAGAGCCCACGCCGTCGGGCGCATGACGGAACGTGTGTTATCGGCGCTCGACGAC CCCGAAGACGGAGGAAGGCG
Downstream 100 bases:
>100_bases TACGACCGGTCAACCTCGTTCAACCAGCTAGGTGCTGTCCGGGTCGCACGATGCCCTCTTAAAGACGCGTGTTCACGCCC TTCGTGTCGGAGGTCCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKVYIDSAPENMVDDLALDAEGVLEERWNGWVRPIATAEALGEFLHAWRANDPNGIWGYVTEVGDTLVCTRSDADDYVDE FPKIGTTADGRAVYDLSGWVWVLPQDNDE
Sequences:
>Translated_109_residues MKVYIDSAPENMVDDLALDAEGVLEERWNGWVRPIATAEALGEFLHAWRANDPNGIWGYVTEVGDTLVCTRSDADDYVDE FPKIGTTADGRAVYDLSGWVWVLPQDNDE >Mature_109_residues MKVYIDSAPENMVDDLALDAEGVLEERWNGWVRPIATAEALGEFLHAWRANDPNGIWGYVTEVGDTLVCTRSDADDYVDE FPKIGTTADGRAVYDLSGWVWVLPQDNDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12191; Mature: 12191
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYIDSAPENMVDDLALDAEGVLEERWNGWVRPIATAEALGEFLHAWRANDPNGIWGYV CEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE TEVGDTLVCTRSDADDYVDEFPKIGTTADGRAVYDLSGWVWVLPQDNDE ECCCCEEEEECCCCHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCC >Mature Secondary Structure MKVYIDSAPENMVDDLALDAEGVLEERWNGWVRPIATAEALGEFLHAWRANDPNGIWGYV CEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE TEVGDTLVCTRSDADDYVDEFPKIGTTADGRAVYDLSGWVWVLPQDNDE ECCCCEEEEECCCCHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA