| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716513
Identifier: 119716513
GI number: 119716513
Start: 2435571
End: 2437094
Strand: Reverse
Name: 119716513
Synonym: Noca_2286
Alternate gene names: NA
Gene position: 2437094-2435571 (Counterclockwise)
Preceding gene: 119716514
Following gene: 119716512
Centisome position: 48.88
GC content: 71.13
Gene sequence:
>1524_bases TTGGCTACTGACCTGCGGCTGGCGTACGCCGAGATCGACGAGGAGCTCTTCGACGTCGACCAGATCCCGATGACCTCCCG CGACATGCGCAGCGTCGGTGAGATGCTCGTCGACGTCGACTACCTGGCGCGCCAGCTCCTCATGGACATTGACGGAGACG CCGCCGGAACGCTGCTGCGCAGCTGGCCGACGATGGTCGCGGCCGCCGAGGACCTGTGGGCATCCCTGCCCGGTCGACGA CCTGGCGTCGACGAGCGCGACGGGCCCATCACCAGCCTCTCCGCCCAGGCCGCCACCATCGAGACCAGCCTCTCCGGCCG TACTGCCTGGCCAGGGCAAGGCCCGACCAGCCCTCGCATCGACCAGATGACCCAGACATTCCTCAACGCCGCCTCGCTGG TCCGCCGCTACGGCGCCGAGATCCGCCACGAGCAGCCTGACGCTCACCGCGACCTAGAGGCAGCACGCACCCGGATCATG CACGGGCTCTACCTGACCGCCCACGCCGTCAACGTCGCGCTCCACGAGCACGGCCGCGACCGCGTCAACGACGCTCGAAG CGCCGGCCGACGGATCCACCTGGCACAGCACCGCTCCCCTTACGCGATCACCCCCACCGGTGTCTGGATCGACCGGATCT CCGCCTGCGAGAACACCGCCCGCAGCTACCTGACCGACCGGTTCCCGCAAGCCCTCGCCGGCGAAGCGATGCGCCCCATC GACGACCCCGACCGGCTAGCGCAAGCACTGGCCAACTGGGACATCCAAACCCACCGCGCGCTGGCCCGGGACCTCCAACC GTCCAACATCCTGCTGATCACCCGCACCCAAGGGCTCATCGCCGGCGCGAGCATGGTCCTCGTCGACGCGGCCGAGACCG CCGGCCTGCTCGAGCGCTACGATCGCCTCGTCCCCGCCATCGCCGACGCAGGGCGGTCCTGGAGCAACCTGGCCAGCCGC TGGGGCGACCTCGCTCCCCCCGGGGCCCGCCTCGAGGAGCCACTGGCCCGCGCGGCCGCGGACGTCCGCGCCGCGTACCG CGAGATCACCCACGGCAAGACCACCCTGGCCAGCCCCGGGGTCATCGCCGACCGCCCAGGGCTACCCCAAGCCGTGCGCG CAACGCTTCGTGCGATCGAGGCCGGATCCGAGCTCGCCGTGGTCGTCGCTGAGAAGGCCGACGCTCCCGACCTCACCGGG CCGGCGCGAGCCCTGTCCCGCCGGGCGCACAACGACGTCGAGGCCGGCCTGGCAACGGCGCCGGCCTTCGGCCGCGACGT CGTCTGGGTCTCCCCCGCCGATATCCTCGCCAAACGAATGGTCCCTGTCCCGGCGCCAGTCTCGGAGACGATGCGCGCAG CCAGCAGTGCCACGAGTGCTGCCGCGATCGCCGCTTCCGCGGTCGCGGCGCTGCACGGTCTGGGGCGAGGAACGTCGCCT GTCGGTTCGGATAGGCGCATGGGTCATGAGGTCCGAGAGCCCCACACATTGTCGGGCACGCGACCATCCGGTCCCTCTCG ATAG
Upstream 100 bases:
>100_bases GAGGAGCTAACCCGTCCCCTGGCGCTGCACCGGTCCGACCTGGTGCACGGTTCCCAACTGGTCGTCGACCTGTGCGACCT CATCCGGGAAGCCCGCGGCC
Downstream 100 bases:
>100_bases GGTCAGATTGGCATGTTTCGGCTGGCTCCCGGGCAACGTACTGAACCTCGAGCGCCTCGACGGGTCGAGCCCTGCAGAGC GGACCTAGCACGGAAGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MATDLRLAYAEIDEELFDVDQIPMTSRDMRSVGEMLVDVDYLARQLLMDIDGDAAGTLLRSWPTMVAAAEDLWASLPGRR PGVDERDGPITSLSAQAATIETSLSGRTAWPGQGPTSPRIDQMTQTFLNAASLVRRYGAEIRHEQPDAHRDLEAARTRIM HGLYLTAHAVNVALHEHGRDRVNDARSAGRRIHLAQHRSPYAITPTGVWIDRISACENTARSYLTDRFPQALAGEAMRPI DDPDRLAQALANWDIQTHRALARDLQPSNILLITRTQGLIAGASMVLVDAAETAGLLERYDRLVPAIADAGRSWSNLASR WGDLAPPGARLEEPLARAAADVRAAYREITHGKTTLASPGVIADRPGLPQAVRATLRAIEAGSELAVVVAEKADAPDLTG PARALSRRAHNDVEAGLATAPAFGRDVVWVSPADILAKRMVPVPAPVSETMRAASSATSAAAIAASAVAALHGLGRGTSP VGSDRRMGHEVREPHTLSGTRPSGPSR
Sequences:
>Translated_507_residues MATDLRLAYAEIDEELFDVDQIPMTSRDMRSVGEMLVDVDYLARQLLMDIDGDAAGTLLRSWPTMVAAAEDLWASLPGRR PGVDERDGPITSLSAQAATIETSLSGRTAWPGQGPTSPRIDQMTQTFLNAASLVRRYGAEIRHEQPDAHRDLEAARTRIM HGLYLTAHAVNVALHEHGRDRVNDARSAGRRIHLAQHRSPYAITPTGVWIDRISACENTARSYLTDRFPQALAGEAMRPI DDPDRLAQALANWDIQTHRALARDLQPSNILLITRTQGLIAGASMVLVDAAETAGLLERYDRLVPAIADAGRSWSNLASR WGDLAPPGARLEEPLARAAADVRAAYREITHGKTTLASPGVIADRPGLPQAVRATLRAIEAGSELAVVVAEKADAPDLTG PARALSRRAHNDVEAGLATAPAFGRDVVWVSPADILAKRMVPVPAPVSETMRAASSATSAAAIAASAVAALHGLGRGTSP VGSDRRMGHEVREPHTLSGTRPSGPSR >Mature_506_residues ATDLRLAYAEIDEELFDVDQIPMTSRDMRSVGEMLVDVDYLARQLLMDIDGDAAGTLLRSWPTMVAAAEDLWASLPGRRP GVDERDGPITSLSAQAATIETSLSGRTAWPGQGPTSPRIDQMTQTFLNAASLVRRYGAEIRHEQPDAHRDLEAARTRIMH GLYLTAHAVNVALHEHGRDRVNDARSAGRRIHLAQHRSPYAITPTGVWIDRISACENTARSYLTDRFPQALAGEAMRPID DPDRLAQALANWDIQTHRALARDLQPSNILLITRTQGLIAGASMVLVDAAETAGLLERYDRLVPAIADAGRSWSNLASRW GDLAPPGARLEEPLARAAADVRAAYREITHGKTTLASPGVIADRPGLPQAVRATLRAIEAGSELAVVVAEKADAPDLTGP ARALSRRAHNDVEAGLATAPAFGRDVVWVSPADILAKRMVPVPAPVSETMRAASSATSAAAIAASAVAALHGLGRGTSPV GSDRRMGHEVREPHTLSGTRPSGPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54347; Mature: 54216
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDLRLAYAEIDEELFDVDQIPMTSRDMRSVGEMLVDVDYLARQLLMDIDGDAAGTLLR CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SWPTMVAAAEDLWASLPGRRPGVDERDGPITSLSAQAATIETSLSGRTAWPGQGPTSPRI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCHH DQMTQTFLNAASLVRRYGAEIRHEQPDAHRDLEAARTRIMHGLYLTAHAVNVALHEHGRD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RVNDARSAGRRIHLAQHRSPYAITPTGVWIDRISACENTARSYLTDRFPQALAGEAMRPI HHHHHHHCCCEEEEHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DDPDRLAQALANWDIQTHRALARDLQPSNILLITRTQGLIAGASMVLVDAAETAGLLERY CCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCHHHCCCEEEEECHHHHHHHHHH DRLVPAIADAGRSWSNLASRWGDLAPPGARLEEPLARAAADVRAAYREITHGKTTLASPG HHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VIADRPGLPQAVRATLRAIEAGSELAVVVAEKADAPDLTGPARALSRRAHNDVEAGLATA CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCC PAFGRDVVWVSPADILAKRMVPVPAPVSETMRAASSATSAAAIAASAVAALHGLGRGTSP CCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VGSDRRMGHEVREPHTLSGTRPSGPSR CCCHHHHCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ATDLRLAYAEIDEELFDVDQIPMTSRDMRSVGEMLVDVDYLARQLLMDIDGDAAGTLLR CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SWPTMVAAAEDLWASLPGRRPGVDERDGPITSLSAQAATIETSLSGRTAWPGQGPTSPRI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCHH DQMTQTFLNAASLVRRYGAEIRHEQPDAHRDLEAARTRIMHGLYLTAHAVNVALHEHGRD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RVNDARSAGRRIHLAQHRSPYAITPTGVWIDRISACENTARSYLTDRFPQALAGEAMRPI HHHHHHHCCCEEEEHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DDPDRLAQALANWDIQTHRALARDLQPSNILLITRTQGLIAGASMVLVDAAETAGLLERY CCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCHHHCCCEEEEECHHHHHHHHHH DRLVPAIADAGRSWSNLASRWGDLAPPGARLEEPLARAAADVRAAYREITHGKTTLASPG HHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VIADRPGLPQAVRATLRAIEAGSELAVVVAEKADAPDLTGPARALSRRAHNDVEAGLATA CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCC PAFGRDVVWVSPADILAKRMVPVPAPVSETMRAASSATSAAAIAASAVAALHGLGRGTSP CCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VGSDRRMGHEVREPHTLSGTRPSGPSR CCCHHHHCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA