| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716506
Identifier: 119716506
GI number: 119716506
Start: 2428320
End: 2428898
Strand: Reverse
Name: 119716506
Synonym: Noca_2279
Alternate gene names: NA
Gene position: 2428898-2428320 (Counterclockwise)
Preceding gene: 119716507
Following gene: 119716505
Centisome position: 48.72
GC content: 64.08
Gene sequence:
>579_bases ATGATGCGCATTCCTCGTGAAGTAGAGACGAAGGTGGTCACGCGCCTATACGCCGACGCAAAGCAGCTCGACTGGGCGAG CCTGACGCCGCAGGAGCACTCGGCCCAGTACGCCAAGTGGGTGGATGATCCTGAGGTCGGCGGCCGCCTTCGGGAGTACC TCTCCGACGGCGACGCGCGCGTGTGGATCAAGGACGGACCCATGAAGGAGTGGAGTCGGTCCCTCAGTGGTGTCGGCAAG TACGCGGGGCTGGTCGACGGTGCCGAGGACGTGCCCGTAGCCCTGGTACGTAAGGTGCTGGGCTCAGATTGGGAACTGGA CCCCGACACCATCCGCTCCAAGCCACTCCGCCTAACCGCCCGGAAGGGGGAGGAGGAAACCGTCCTGACCTGGGCTCAGG CCCGCGACCTCAAGCACCTGTGCTGGGCTGCCCTGACAGCGAGTGCTGAGGGCGATCATCGACCGTGGGTGATCTGTGTG ATCGAGACCTTCACCAGGCCTATTCCAGCCAACGAGAAGAAGGCGCACCTACGGCTCGCAGGGCGATGCGACCTCCGGCT CGTTCACGTTTCACTATGA
Upstream 100 bases:
>100_bases CCGCCGGCACGCTCCTCGACTACTGGATCCGCGACGCCGCCGACCTTGAGACAGCGGCCGATGAGGTACGCCTCCAGTTC CCAACAGCGATCGGTCTCGA
Downstream 100 bases:
>100_bases GCGACGACCATCCCGCCGAACCCGACTGGGTCGCCGTGTTCTCGCCTCGATCGGCGGATGACTCGGCCCAGGATGAGCGC AGCCGCGCGGGCGCGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MMRIPREVETKVVTRLYADAKQLDWASLTPQEHSAQYAKWVDDPEVGGRLREYLSDGDARVWIKDGPMKEWSRSLSGVGK YAGLVDGAEDVPVALVRKVLGSDWELDPDTIRSKPLRLTARKGEEETVLTWAQARDLKHLCWAALTASAEGDHRPWVICV IETFTRPIPANEKKAHLRLAGRCDLRLVHVSL
Sequences:
>Translated_192_residues MMRIPREVETKVVTRLYADAKQLDWASLTPQEHSAQYAKWVDDPEVGGRLREYLSDGDARVWIKDGPMKEWSRSLSGVGK YAGLVDGAEDVPVALVRKVLGSDWELDPDTIRSKPLRLTARKGEEETVLTWAQARDLKHLCWAALTASAEGDHRPWVICV IETFTRPIPANEKKAHLRLAGRCDLRLVHVSL >Mature_192_residues MMRIPREVETKVVTRLYADAKQLDWASLTPQEHSAQYAKWVDDPEVGGRLREYLSDGDARVWIKDGPMKEWSRSLSGVGK YAGLVDGAEDVPVALVRKVLGSDWELDPDTIRSKPLRLTARKGEEETVLTWAQARDLKHLCWAALTASAEGDHRPWVICV IETFTRPIPANEKKAHLRLAGRCDLRLVHVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21679; Mature: 21679
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRIPREVETKVVTRLYADAKQLDWASLTPQEHSAQYAKWVDDPEVGGRLREYLSDGDAR CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEE VWIKDGPMKEWSRSLSGVGKYAGLVDGAEDVPVALVRKVLGSDWELDPDTIRSKPLRLTA EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEEEE RKGEEETVLTWAQARDLKHLCWAALTASAEGDHRPWVICVIETFTRPIPANEKKAHLRLA CCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEEE GRCDLRLVHVSL CCCCEEEEEEEC >Mature Secondary Structure MMRIPREVETKVVTRLYADAKQLDWASLTPQEHSAQYAKWVDDPEVGGRLREYLSDGDAR CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEE VWIKDGPMKEWSRSLSGVGKYAGLVDGAEDVPVALVRKVLGSDWELDPDTIRSKPLRLTA EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEEEE RKGEEETVLTWAQARDLKHLCWAALTASAEGDHRPWVICVIETFTRPIPANEKKAHLRLA CCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEEE GRCDLRLVHVSL CCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA