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The map label for this gene is yejH [H]

Identifier: 119716507

GI number: 119716507

Start: 2428895

End: 2430571

Strand: Reverse

Name: yejH [H]

Synonym: Noca_2280

Alternate gene names: 119716507

Gene position: 2430571-2428895 (Counterclockwise)

Preceding gene: 119716508

Following gene: 119716506

Centisome position: 48.75

GC content: 64.7

Gene sequence:

>1677_bases
GTGAGCGGGTTCCTTGCCCCTCGCGCCCTCCTCGCGGGCGGTCCACGAGGCCTTACCCTCGCAACCGAGCGGGCGCTTTG
GCACCTAGGTTTCACCGACGTCCGAATCATCGACGGCGCAGGCGACGAGGGAGCGGACATCCTGGCAGTCCGGGACCGCG
AGCAGTGGGTGCTGCAGTGCAAGTTCTCGAGCAGAGGCGCCGTGGACCGCACGGGCGTCGACGACGCCGAGCGGGCCCGG
TCCCGCTACGGGGCGGACCATGCCGTCGTCGTCACCAATACGAGCCTCAACGCCACCGCCGAGGCACGACGCAAGGCCCT
CGGCGGGATCGGCATAAAGGTCGACGCGTGGGCTGGCCCGACCCTTGAGGCCATCTACGCGAAGATGCCCGCACGTGTCC
CGTCTAAGTACGAGCTGCGCCCGTACCAGCTTGAAGCGGCCGAGCGGATTCAGCAGGACCTCGAGGACACGAACCGAGCC
CTGCTCGTACTGGCGACCGGGCTCGGTAAGACGGTGGTCGGTGGCGAGGTGATACGGCGTCATCTGGAGAGCCACCCAGA
CGCCAGGATCCTGGTCGTCGCCCACATGAAGGAACTCGTCGAGCAGCTCGAGAAGGCCCTGTGGCGTCACCTGGACAAGT
CAGTGCCAACCCAGGTCCTGACAGGCGACACCAGACCCACTTCTTTCGAAGGCGTCACCGTGGCGACGATCGATTCAGTG
CTTGGCCTTGTCAGAACGGACTGGCGTCCATCGCTGATCATGATCGACGAGACCCACCACGTCGGAGAGACGGGCATGTT
TGCCCAGCTCCTCGACGAGTGTCAGGACGCCCGCCAGTTCGGGGTCACGGCTACGCCCTGGCGAGGTGACAAGTTCGACA
TCACGTCCCGGTTCGGGCAACCTTCGTACAGCCTCGGCATTGCCGAGGGCATGGCGGACGGGTATCTCGCCCAAGTGGAC
TACCGCATGTACGTCGACAACCTCGACTGGGACTTCGTCCGCCACGCCAGCGAGCACGGCTACTCCATCAAGGAACTCAA
CAAGGCTCTTTTCCTTCCGCAGCGCGATGAGGAGATCGTCGACGAGTTCAGGCAGGCCTGGCGGGAGATCCGCGACCCGC
GGGCCATCGTCTTCTGCCAGACGATCGAGCACGCGGAGCGTATGGCCACTCTGCTCGCTGGCGCCGATCAGAGCTGGCGC
AGAGCCTCGTATCTGCACAGCGGGCTCAGCAGACAACAACGTCAGATTCTGCTCAATGCGTTCCGGCTCGGCCGGGTTCC
CATCATCACGTGCGTCGATGTGTTCAACGAAGGCGTCGACGTACCCGACGTCAACCTCATCGCGTTCCTCCGTGTGACAC
ACAGCCGACGAATCTTCGTCCAGCAGCTCGGCCGCGGCCTACGTCTACGCGAGGGCAAGGAGAGTCTCAAGGTGCTTGAC
TTCGTCACCGACGTGCGGCGCGTCGCCGCCGGCCTGGACCTCAAGCGAACCCTTGCGGCGATCCGGGGCGGAGACATCGA
GGAACTCTCACTCCCGCTCCCCGGTGGTTCACAGATCACGTTCAACGACGAGACCGCCGGCACGCTCCTCGACTACTGGA
TCCGCGACGCCGCCGACCTTGAGACAGCGGCCGATGAGGTACGCCTCCAGTTCCCAACAGCGATCGGTCTCGAATGA

Upstream 100 bases:

>100_bases
CTACACTCCTCACCTTCCAGGCGTCACCGAGCGTCAGCCAGCTTCGCCGGACGCGGTTGAGCCTCCAACTCCTCCAGCAA
GAACTCGCCCCGGAGGAGCA

Downstream 100 bases:

>100_bases
TGCGCATTCCTCGTGAAGTAGAGACGAAGGTGGTCACGCGCCTATACGCCGACGCAAAGCAGCTCGACTGGGCGAGCCTG
ACGCCGCAGGAGCACTCGGC

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MSGFLAPRALLAGGPRGLTLATERALWHLGFTDVRIIDGAGDEGADILAVRDREQWVLQCKFSSRGAVDRTGVDDAERAR
SRYGADHAVVVTNTSLNATAEARRKALGGIGIKVDAWAGPTLEAIYAKMPARVPSKYELRPYQLEAAERIQQDLEDTNRA
LLVLATGLGKTVVGGEVIRRHLESHPDARILVVAHMKELVEQLEKALWRHLDKSVPTQVLTGDTRPTSFEGVTVATIDSV
LGLVRTDWRPSLIMIDETHHVGETGMFAQLLDECQDARQFGVTATPWRGDKFDITSRFGQPSYSLGIAEGMADGYLAQVD
YRMYVDNLDWDFVRHASEHGYSIKELNKALFLPQRDEEIVDEFRQAWREIRDPRAIVFCQTIEHAERMATLLAGADQSWR
RASYLHSGLSRQQRQILLNAFRLGRVPIITCVDVFNEGVDVPDVNLIAFLRVTHSRRIFVQQLGRGLRLREGKESLKVLD
FVTDVRRVAAGLDLKRTLAAIRGGDIEELSLPLPGGSQITFNDETAGTLLDYWIRDAADLETAADEVRLQFPTAIGLE

Sequences:

>Translated_558_residues
MSGFLAPRALLAGGPRGLTLATERALWHLGFTDVRIIDGAGDEGADILAVRDREQWVLQCKFSSRGAVDRTGVDDAERAR
SRYGADHAVVVTNTSLNATAEARRKALGGIGIKVDAWAGPTLEAIYAKMPARVPSKYELRPYQLEAAERIQQDLEDTNRA
LLVLATGLGKTVVGGEVIRRHLESHPDARILVVAHMKELVEQLEKALWRHLDKSVPTQVLTGDTRPTSFEGVTVATIDSV
LGLVRTDWRPSLIMIDETHHVGETGMFAQLLDECQDARQFGVTATPWRGDKFDITSRFGQPSYSLGIAEGMADGYLAQVD
YRMYVDNLDWDFVRHASEHGYSIKELNKALFLPQRDEEIVDEFRQAWREIRDPRAIVFCQTIEHAERMATLLAGADQSWR
RASYLHSGLSRQQRQILLNAFRLGRVPIITCVDVFNEGVDVPDVNLIAFLRVTHSRRIFVQQLGRGLRLREGKESLKVLD
FVTDVRRVAAGLDLKRTLAAIRGGDIEELSLPLPGGSQITFNDETAGTLLDYWIRDAADLETAADEVRLQFPTAIGLE
>Mature_557_residues
SGFLAPRALLAGGPRGLTLATERALWHLGFTDVRIIDGAGDEGADILAVRDREQWVLQCKFSSRGAVDRTGVDDAERARS
RYGADHAVVVTNTSLNATAEARRKALGGIGIKVDAWAGPTLEAIYAKMPARVPSKYELRPYQLEAAERIQQDLEDTNRAL
LVLATGLGKTVVGGEVIRRHLESHPDARILVVAHMKELVEQLEKALWRHLDKSVPTQVLTGDTRPTSFEGVTVATIDSVL
GLVRTDWRPSLIMIDETHHVGETGMFAQLLDECQDARQFGVTATPWRGDKFDITSRFGQPSYSLGIAEGMADGYLAQVDY
RMYVDNLDWDFVRHASEHGYSIKELNKALFLPQRDEEIVDEFRQAWREIRDPRAIVFCQTIEHAERMATLLAGADQSWRR
ASYLHSGLSRQQRQILLNAFRLGRVPIITCVDVFNEGVDVPDVNLIAFLRVTHSRRIFVQQLGRGLRLREGKESLKVLDF
VTDVRRVAAGLDLKRTLAAIRGGDIEELSLPLPGGSQITFNDETAGTLLDYWIRDAADLETAADEVRLQFPTAIGLE

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=370, Percent_Identity=29.7297297297297, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI226510991, Length=434, Percent_Identity=23.5023041474654, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320539, Length=397, Percent_Identity=24.9370277078086, Blast_Score=95, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 62169; Mature: 62038

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFLAPRALLAGGPRGLTLATERALWHLGFTDVRIIDGAGDEGADILAVRDREQWVLQC
CCCCCCCHHHHCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEE
KFSSRGAVDRTGVDDAERARSRYGADHAVVVTNTSLNATAEARRKALGGIGIKVDAWAGP
ECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCC
TLEAIYAKMPARVPSKYELRPYQLEAAERIQQDLEDTNRALLVLATGLGKTVVGGEVIRR
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCHHHHHH
HLESHPDARILVVAHMKELVEQLEKALWRHLDKSVPTQVLTGDTRPTSFEGVTVATIDSV
HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEHHHHHHH
LGLVRTDWRPSLIMIDETHHVGETGMFAQLLDECQDARQFGVTATPWRGDKFDITSRFGQ
HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
PSYSLGIAEGMADGYLAQVDYRMYVDNLDWDFVRHASEHGYSIKELNKALFLPQRDEEIV
CCCCHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
DEFRQAWREIRDPRAIVFCQTIEHAERMATLLAGADQSWRRASYLHSGLSRQQRQILLNA
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRLGRVPIITCVDVFNEGVDVPDVNLIAFLRVTHSRRIFVQQLGRGLRLREGKESLKVLD
HHCCCCHHHHHHHHHHCCCCCCCCHHEEEEEHHCCHHHHHHHHCCCCCCCCCHHHHHHHH
FVTDVRRVAAGLDLKRTLAAIRGGDIEELSLPLPGGSQITFNDETAGTLLDYWIRDAADL
HHHHHHHHHHCCCHHHHHHHHCCCCHHHEEECCCCCCEEEECCCCHHHHHHHHHHHHHHH
ETAADEVRLQFPTAIGLE
HHHHHHEEEECCCCCCCC
>Mature Secondary Structure 
SGFLAPRALLAGGPRGLTLATERALWHLGFTDVRIIDGAGDEGADILAVRDREQWVLQC
CCCCCCHHHHCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEE
KFSSRGAVDRTGVDDAERARSRYGADHAVVVTNTSLNATAEARRKALGGIGIKVDAWAGP
ECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCC
TLEAIYAKMPARVPSKYELRPYQLEAAERIQQDLEDTNRALLVLATGLGKTVVGGEVIRR
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCHHHHHH
HLESHPDARILVVAHMKELVEQLEKALWRHLDKSVPTQVLTGDTRPTSFEGVTVATIDSV
HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEHHHHHHH
LGLVRTDWRPSLIMIDETHHVGETGMFAQLLDECQDARQFGVTATPWRGDKFDITSRFGQ
HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
PSYSLGIAEGMADGYLAQVDYRMYVDNLDWDFVRHASEHGYSIKELNKALFLPQRDEEIV
CCCCHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
DEFRQAWREIRDPRAIVFCQTIEHAERMATLLAGADQSWRRASYLHSGLSRQQRQILLNA
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRLGRVPIITCVDVFNEGVDVPDVNLIAFLRVTHSRRIFVQQLGRGLRLREGKESLKVLD
HHCCCCHHHHHHHHHHCCCCCCCCHHEEEEEHHCCHHHHHHHHCCCCCCCCCHHHHHHHH
FVTDVRRVAAGLDLKRTLAAIRGGDIEELSLPLPGGSQITFNDETAGTLLDYWIRDAADL
HHHHHHHHHHCCCHHHHHHHHCCCCHHHEEECCCCCCEEEECCCCHHHHHHHHHHHHHHH
ETAADEVRLQFPTAIGLE
HHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]