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The map label for this gene is 119716505

Identifier: 119716505

GI number: 119716505

Start: 2426863

End: 2428284

Strand: Reverse

Name: 119716505

Synonym: Noca_2278

Alternate gene names: NA

Gene position: 2428284-2426863 (Counterclockwise)

Preceding gene: 119716506

Following gene: 119716504

Centisome position: 48.7

GC content: 65.54

Gene sequence:

>1422_bases
GTGTTCTCGCCTCGATCGGCGGATGACTCGGCCCAGGATGAGCGCAGCCGCGCGGGCGCGCCCAGCGCTGGCGGCTGTGC
CGAGACGGTCGATGACCTGGGCGACGGGGACCTCGGCGCTCGCGGGTGGCTCGATGACGCTTGGGTGGCTCTCCCTGAAC
GCAGCCGAGACATCCTCCGTCGGCGCCTCGCTGGGGAGACACTGGATGAGATTGGACTGGCTCTGAACCTCACCCGCGAA
CGCGTCCGGCAGGTACAGAAGGCGTCTGAAGGCGCGCTCGTGCGCGCGATGGAAAATCGGGCCCCGCAGTTTCTCTCCGC
CTTGCACACGGAACTCGGCGACTCCCCGGCGGTGGCGCATCGTCACCTCGCGAAGCTTGTGGACGCTCACTCCACGACCG
CGCTGGGGTGTTTGCTCAAGACCTTGGGTGCCAGCCATCCCCGCACCTGGGCTGGGGCGCTCTCCGAGTTCTGGACCTTT
CGGCCGAACGAGCTGCGACAACAATTGGGCCGAATGGTCGAGCTCGCACCCCTGACCCACGAGGAAGCTGACCAAGCCGC
CGCCGGGCTTGGCCTTCCCGAGGACCTCGATTGGCGAAGCGTTCTCGCGCACAGAAACAGCAAACTGGCCGCCCACGATC
TGGGTTGGATTCGACCCGCGCGACTCACCCGAGACGTGGCGTATCTCTGGCTCAAGCTCGAGGGCGAACCACGAGCTGCG
GACGAGATCGCGGTACAGGCAGGATGCAGTGAACATGCCGCGCGGGAGAACATGCGACGAGACCCAGCCTTCTCACAAGT
TCGACCAGAGGGCACTTGGGCGCTCTCCGATTGGCGTGTCCCCGGCTCAGAGAACCGCTATGGCTCCGCCGTTGACGCCC
TGGTTGAGGTTCTCCGAGATCTCGGGCCGCTGCCTGTTGACCAACTCCGCGTTGAGACACAGCGCCGTTACCCCGTCAGT
GATTGGCGGGTGAACCAGTGCCTGTCGAGCAACCTCATCGGGCTTAACCCCGCTGGCCTGTATGACCTGGCCGAACGGGG
GGCTGTCCCCGTCGAGGACACGGAACCCAAGCAGCCTCCGAACATCAAGACCAGTGGAGACGTGGTGGGCATCGAACTCG
TAGTCGACCGCGAGATCCTTCGCGGCAGCGGTATACCCGTGAATCGCTGGCTCACTTGGCAGCTGGGCCTCAGAACCGCT
CCGTCGACAAGATACTTTGCCCTCCCGGAGGGACACGGCGAGGTGCGCGTCACGCGGATGACCAGCAATGCTCAAGTCTC
GAGTTTGCGTGCGGTGGCCGCCGAGTTCGGCCTCGTTGAGGGCTGCAAGTTTGCGCTCCTGCTCAACACGAGCACGGACA
CCGCCAGCGTCCGCCACATCTGCCCGCAGGACGCGTGTGGCGCGCGTAGCGCGACGCACTGA

Upstream 100 bases:

>100_bases
AGAAGAAGGCGCACCTACGGCTCGCAGGGCGATGCGACCTCCGGCTCGTTCACGTTTCACTATGAGCGACGACCATCCCG
CCGAACCCGACTGGGTCGCC

Downstream 100 bases:

>100_bases
TCTTCAGTACCCCGAAGAGCTGGCCGCATCCTGCATCCCGCCAGCAGCTCGACCACGCGGCCCCTGAGCGTCGGCTTCGC
TAGACGGATGGCTGGTCTGC

Product: sigma-70 region 4 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MFSPRSADDSAQDERSRAGAPSAGGCAETVDDLGDGDLGARGWLDDAWVALPERSRDILRRRLAGETLDEIGLALNLTRE
RVRQVQKASEGALVRAMENRAPQFLSALHTELGDSPAVAHRHLAKLVDAHSTTALGCLLKTLGASHPRTWAGALSEFWTF
RPNELRQQLGRMVELAPLTHEEADQAAAGLGLPEDLDWRSVLAHRNSKLAAHDLGWIRPARLTRDVAYLWLKLEGEPRAA
DEIAVQAGCSEHAARENMRRDPAFSQVRPEGTWALSDWRVPGSENRYGSAVDALVEVLRDLGPLPVDQLRVETQRRYPVS
DWRVNQCLSSNLIGLNPAGLYDLAERGAVPVEDTEPKQPPNIKTSGDVVGIELVVDREILRGSGIPVNRWLTWQLGLRTA
PSTRYFALPEGHGEVRVTRMTSNAQVSSLRAVAAEFGLVEGCKFALLLNTSTDTASVRHICPQDACGARSATH

Sequences:

>Translated_473_residues
MFSPRSADDSAQDERSRAGAPSAGGCAETVDDLGDGDLGARGWLDDAWVALPERSRDILRRRLAGETLDEIGLALNLTRE
RVRQVQKASEGALVRAMENRAPQFLSALHTELGDSPAVAHRHLAKLVDAHSTTALGCLLKTLGASHPRTWAGALSEFWTF
RPNELRQQLGRMVELAPLTHEEADQAAAGLGLPEDLDWRSVLAHRNSKLAAHDLGWIRPARLTRDVAYLWLKLEGEPRAA
DEIAVQAGCSEHAARENMRRDPAFSQVRPEGTWALSDWRVPGSENRYGSAVDALVEVLRDLGPLPVDQLRVETQRRYPVS
DWRVNQCLSSNLIGLNPAGLYDLAERGAVPVEDTEPKQPPNIKTSGDVVGIELVVDREILRGSGIPVNRWLTWQLGLRTA
PSTRYFALPEGHGEVRVTRMTSNAQVSSLRAVAAEFGLVEGCKFALLLNTSTDTASVRHICPQDACGARSATH
>Mature_473_residues
MFSPRSADDSAQDERSRAGAPSAGGCAETVDDLGDGDLGARGWLDDAWVALPERSRDILRRRLAGETLDEIGLALNLTRE
RVRQVQKASEGALVRAMENRAPQFLSALHTELGDSPAVAHRHLAKLVDAHSTTALGCLLKTLGASHPRTWAGALSEFWTF
RPNELRQQLGRMVELAPLTHEEADQAAAGLGLPEDLDWRSVLAHRNSKLAAHDLGWIRPARLTRDVAYLWLKLEGEPRAA
DEIAVQAGCSEHAARENMRRDPAFSQVRPEGTWALSDWRVPGSENRYGSAVDALVEVLRDLGPLPVDQLRVETQRRYPVS
DWRVNQCLSSNLIGLNPAGLYDLAERGAVPVEDTEPKQPPNIKTSGDVVGIELVVDREILRGSGIPVNRWLTWQLGLRTA
PSTRYFALPEGHGEVRVTRMTSNAQVSSLRAVAAEFGLVEGCKFALLLNTSTDTASVRHICPQDACGARSATH

Specific function: Unknown

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51736; Mature: 51736

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSPRSADDSAQDERSRAGAPSAGGCAETVDDLGDGDLGARGWLDDAWVALPERSRDILR
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHEECCHHHHHHHH
RRLAGETLDEIGLALNLTRERVRQVQKASEGALVRAMENRAPQFLSALHTELGDSPAVAH
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHH
RHLAKLVDAHSTTALGCLLKTLGASHPRTWAGALSEFWTFRPNELRQQLGRMVELAPLTH
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
EEADQAAAGLGLPEDLDWRSVLAHRNSKLAAHDLGWIRPARLTRDVAYLWLKLEGEPRAA
HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHCEEEEEEEECCCCCCH
DEIAVQAGCSEHAARENMRRDPAFSQVRPEGTWALSDWRVPGSENRYGSAVDALVEVLRD
HHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
LGPLPVDQLRVETQRRYPVSDWRVNQCLSSNLIGLNPAGLYDLAERGAVPVEDTEPKQPP
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
NIKTSGDVVGIELVVDREILRGSGIPVNRWLTWQLGLRTAPSTRYFALPEGHGEVRVTRM
CCCCCCCEEEEEEEEEHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEEE
TSNAQVSSLRAVAAEFGLVEGCKFALLLNTSTDTASVRHICPQDACGARSATH
CCCCHHHHHHHHHHHHCHHCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSPRSADDSAQDERSRAGAPSAGGCAETVDDLGDGDLGARGWLDDAWVALPERSRDILR
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHEECCHHHHHHHH
RRLAGETLDEIGLALNLTRERVRQVQKASEGALVRAMENRAPQFLSALHTELGDSPAVAH
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHH
RHLAKLVDAHSTTALGCLLKTLGASHPRTWAGALSEFWTFRPNELRQQLGRMVELAPLTH
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
EEADQAAAGLGLPEDLDWRSVLAHRNSKLAAHDLGWIRPARLTRDVAYLWLKLEGEPRAA
HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHCEEEEEEEECCCCCCH
DEIAVQAGCSEHAARENMRRDPAFSQVRPEGTWALSDWRVPGSENRYGSAVDALVEVLRD
HHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
LGPLPVDQLRVETQRRYPVSDWRVNQCLSSNLIGLNPAGLYDLAERGAVPVEDTEPKQPP
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
NIKTSGDVVGIELVVDREILRGSGIPVNRWLTWQLGLRTAPSTRYFALPEGHGEVRVTRM
CCCCCCCEEEEEEEEEHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEEE
TSNAQVSSLRAVAAEFGLVEGCKFALLLNTSTDTASVRHICPQDACGARSATH
CCCCHHHHHHHHHHHHCHHCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA