| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716504
Identifier: 119716504
GI number: 119716504
Start: 2426480
End: 2426695
Strand: Reverse
Name: 119716504
Synonym: Noca_2277
Alternate gene names: NA
Gene position: 2426695-2426480 (Counterclockwise)
Preceding gene: 119716505
Following gene: 119716499
Centisome position: 48.67
GC content: 63.89
Gene sequence:
>216_bases ATGTCGGCCTACTCCTCGTGCGCCAAGACCCACTGGCCGAGCAGCCACCACTGGTTGAAGAGGTTCAACGGCTCCTCGTC GACCGGCCTCCACGGCCTCCCGATGAAGGCCGTCCAACTCGGCGGCGAGCACAGCCAGTGCCCGGTCGACGCCTCGAGCG TCGCCAAGGCACGACAGAGCATCGTGATCAACATGAGTGATCCCTTCTCGATGTGA
Upstream 100 bases:
>100_bases GCGTCGGCTTCGCTAGACGGATGGCTGGTCTGCGTCCCCAGCCGTTCACGCCCTGCCGAGGGCCCGGTGCCACCGGCAGG CCAGGGGGCGGGCCTTCCCG
Downstream 100 bases:
>100_bases GTCGACAGCCCCTCTGCAGGGCTGTCATTGGTGCCGAGGGATCACGCTCGAAGACTAGCTCAGCGGAGACGTGCGCACGC AGTCCGAATGCCGTCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSAYSSCAKTHWPSSHHWLKRFNGSSSTGLHGLPMKAVQLGGEHSQCPVDASSVAKARQSIVINMSDPFSM
Sequences:
>Translated_71_residues MSAYSSCAKTHWPSSHHWLKRFNGSSSTGLHGLPMKAVQLGGEHSQCPVDASSVAKARQSIVINMSDPFSM >Mature_70_residues SAYSSCAKTHWPSSHHWLKRFNGSSSTGLHGLPMKAVQLGGEHSQCPVDASSVAKARQSIVINMSDPFSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7659; Mature: 7528
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYSSCAKTHWPSSHHWLKRFNGSSSTGLHGLPMKAVQLGGEHSQCPVDASSVAKARQS CCCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHC IVINMSDPFSM EEEECCCCCCC >Mature Secondary Structure SAYSSCAKTHWPSSHHWLKRFNGSSSTGLHGLPMKAVQLGGEHSQCPVDASSVAKARQS CCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHC IVINMSDPFSM EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA