| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716438
Identifier: 119716438
GI number: 119716438
Start: 2358320
End: 2358712
Strand: Reverse
Name: 119716438
Synonym: Noca_2209
Alternate gene names: NA
Gene position: 2358712-2358320 (Counterclockwise)
Preceding gene: 119716443
Following gene: 119716437
Centisome position: 47.31
GC content: 70.48
Gene sequence:
>393_bases ATGGCGATGATGCAAGAGGAGCGGGAGACGCTGGCCCCGGCGACCGCGCTGTTCCGCGGGCTGGCCGACCCAGTGCGGCT GGCGATCGTGCGGCAGCTCGTATCGGGAGAGGCGCGGGTCGTGGACTTGGAACGCCGTCTGGGTTTGGCCCAGTCCACGG TGTCGGCACACCTGGGGTGCCTGCGCGAATGCGGCCTCGTCGAGTATCGGGCGGTGGGCCGGCAATCGTTCTACTCGCTG AGCCGCCCCGAGTTGATGGGCCTGCTCGCCTCTGCCGAGACCCTGTTGGCAGCGACCGGGCAGTCGGTGGCCCTGTGTCC GAACTACGGCGACCCGAGCGGTGGCCTAAGCGGTGACCTGAGCGGGGCGACCGGCGAGGACGGCGCACGGTGA
Upstream 100 bases:
>100_bases ATCGCGCACACCCTCTCGTCGGGACCCCTAGGAGTCAGCGCCAGAGCCAGGTGGCATCCGGTTTTGACGATCTATCTAGC TCGCAAGTTATCATCCAGAT
Downstream 100 bases:
>100_bases GTGCGGTGATCGCCATCGAGCCCCGAGTGGTCGGCGCGACCAAAGACCTGGGGCCGTCGCAGGGAGGAGTGTCCGGGACC CTGGCCTGCCGGCGGGACCG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulator ArsR Family; Regulatory Protein Arsr; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator ArsR; Transcription Regulator
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAMMQEERETLAPATALFRGLADPVRLAIVRQLVSGEARVVDLERRLGLAQSTVSAHLGCLRECGLVEYRAVGRQSFYSL SRPELMGLLASAETLLAATGQSVALCPNYGDPSGGLSGDLSGATGEDGAR
Sequences:
>Translated_130_residues MAMMQEERETLAPATALFRGLADPVRLAIVRQLVSGEARVVDLERRLGLAQSTVSAHLGCLRECGLVEYRAVGRQSFYSL SRPELMGLLASAETLLAATGQSVALCPNYGDPSGGLSGDLSGATGEDGAR >Mature_129_residues AMMQEERETLAPATALFRGLADPVRLAIVRQLVSGEARVVDLERRLGLAQSTVSAHLGCLRECGLVEYRAVGRQSFYSLS RPELMGLLASAETLLAATGQSVALCPNYGDPSGGLSGDLSGATGEDGAR
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13652; Mature: 13521
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMMQEERETLAPATALFRGLADPVRLAIVRQLVSGEARVVDLERRLGLAQSTVSAHLGC CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHCHHHHHHHHHHHH LRECGLVEYRAVGRQSFYSLSRPELMGLLASAETLLAATGQSVALCPNYGDPSGGLSGDL HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC SGATGEDGAR CCCCCCCCCC >Mature Secondary Structure AMMQEERETLAPATALFRGLADPVRLAIVRQLVSGEARVVDLERRLGLAQSTVSAHLGC CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHCHHHHHHHHHHHH LRECGLVEYRAVGRQSFYSLSRPELMGLLASAETLLAATGQSVALCPNYGDPSGGLSGDL HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC SGATGEDGAR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA