| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716443
Identifier: 119716443
GI number: 119716443
Start: 2363221
End: 2363721
Strand: Reverse
Name: 119716443
Synonym: Noca_2214
Alternate gene names: NA
Gene position: 2363721-2363221 (Counterclockwise)
Preceding gene: 119716461
Following gene: 119716438
Centisome position: 47.41
GC content: 70.86
Gene sequence:
>501_bases ATGCAGTTGCAGAACCGCGTGCCGCCTGTGGCGGTCGCGGTCGGCGCGGCCCTGGGCCAAGTGCTCGTCGCCAACTCCAC GCCCCGAAGCACGGCGAGGACCCTCACCGCAACGGCGGTGGCGGCCGCTTCGACCGCCCTCCTCGCGTCGTCGGTCAGGG CGTTTCGGCGCAGCAACACCTCAGTGAATCCGCTCGACCCCGCTGTGGCCACGACCCTCGTCACCGGGGGGCCCAATCGC TTCACGCGCAACCCCATGTACGTCGGCATGGCCGGACTGCTGGCAGCTCACGCCGCCGCGCGGGGCCAGTGGGCTGCGCT TATCCCGGTCGCGGCGTTCGTCGCGTACATCGACCGGTTCCAGGTCGCACCCGAGGAGGACGCCCTGCGCGCACAGTTCG GCGAGGACTATGCGGCGTACGTTCGCAACGTGCCGCGCTGGCTCGACCTGAGGACCTTCCGGGCGGTCCGTCTCCCGGTG GAGGGGGTCGATTCCCCATGA
Upstream 100 bases:
>100_bases ATGCGGTGGCGGTGACCATGATCCGGGATAGTACATGACTTGCTGTATTCATGACACGATGTATTGTGCTGGTCAGATCC GGAAACCGATGGGAGTCGCG
Downstream 100 bases:
>100_bases GGAATAAGCAGGCGCCGCCGACGGCGTGGACGTTGAGCATGGTCGATCTGGCTGGTGGAAGGCCGGGATCGATCGCGGAC ACGATCTGGCCGATCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Isoprenylcysteine Carboxyl Methyltransferase; S-Isoprenylcysteine Methyltransferase-Like Protein; Protein-S-Isoprenylcysteine Methyltransferase; Protein-S-Isoprenylcysteine Methyltransferase-Like; Protein-S-Isoprenylcysteine Methyltransferase-Like Protein
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MQLQNRVPPVAVAVGAALGQVLVANSTPRSTARTLTATAVAAASTALLASSVRAFRRSNTSVNPLDPAVATTLVTGGPNR FTRNPMYVGMAGLLAAHAAARGQWAALIPVAAFVAYIDRFQVAPEEDALRAQFGEDYAAYVRNVPRWLDLRTFRAVRLPV EGVDSP
Sequences:
>Translated_166_residues MQLQNRVPPVAVAVGAALGQVLVANSTPRSTARTLTATAVAAASTALLASSVRAFRRSNTSVNPLDPAVATTLVTGGPNR FTRNPMYVGMAGLLAAHAAARGQWAALIPVAAFVAYIDRFQVAPEEDALRAQFGEDYAAYVRNVPRWLDLRTFRAVRLPV EGVDSP >Mature_166_residues MQLQNRVPPVAVAVGAALGQVLVANSTPRSTARTLTATAVAAASTALLASSVRAFRRSNTSVNPLDPAVATTLVTGGPNR FTRNPMYVGMAGLLAAHAAARGQWAALIPVAAFVAYIDRFQVAPEEDALRAQFGEDYAAYVRNVPRWLDLRTFRAVRLPV EGVDSP
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17571; Mature: 17571
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLQNRVPPVAVAVGAALGQVLVANSTPRSTARTLTATAVAAASTALLASSVRAFRRSNT CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVNPLDPAVATTLVTGGPNRFTRNPMYVGMAGLLAAHAAARGQWAALIPVAAFVAYIDRF CCCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QVAPEEDALRAQFGEDYAAYVRNVPRWLDLRTFRAVRLPVEGVDSP CCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MQLQNRVPPVAVAVGAALGQVLVANSTPRSTARTLTATAVAAASTALLASSVRAFRRSNT CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVNPLDPAVATTLVTGGPNRFTRNPMYVGMAGLLAAHAAARGQWAALIPVAAFVAYIDRF CCCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QVAPEEDALRAQFGEDYAAYVRNVPRWLDLRTFRAVRLPVEGVDSP CCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA