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The map label for this gene is ccsB [H]

Identifier: 119716430

GI number: 119716430

Start: 2350081

End: 2351679

Strand: Reverse

Name: ccsB [H]

Synonym: Noca_2201

Alternate gene names: 119716430

Gene position: 2351679-2350081 (Counterclockwise)

Preceding gene: 119716431

Following gene: 119716429

Centisome position: 47.17

GC content: 70.04

Gene sequence:

>1599_bases
GTGACTGACGTCAAGACGAAGGCAACGGAAGCCGCCCCAGCAGGCACGGCGCAGGCGCCGCCGTCGTGGGGGTGGCTGCG
CTGGGCGTGGCGCACCCTGACGTCGATGCGTACCGCGGTGGTCCTGCTCGGTCTGCTCGCGCTTGCCGCGATCCCGGGGT
CGGTCTTTCCGCAGCGCAATGTGGCCACCGATCCGGCCGCGGTGCAGCAGTACGTCCTTGAGCATCCCCGACTCGCGCCG
TGGCTGGACCGGCTCGGGATGTTCGACGTCTACGCGTCCTCGTGGTTCGCCGCCATCTACGTGCTGCTGCTGGTTTCCAT
GACCGGGTGCGTGCTGCCCCGATCCCGTCGACTCTGGCAGTCCGCGCGGAGCGCTCCCCCAGCTGCCCCACGGAACCTGG
CCCGCTTCGAGAGCCACCGCGCCTGGGAAACCACACGTGAGCCGGCCGAGGTCATCGCCACCGCCGCGGCGCACCTGCGC
CGCGGCCGGTTCCGCGTCGTCGCCTCCCGTGATGAAGTCCGGGCCGAGCGCGGCTACCTGCGCGAGGTCGGCAACCTCGC
CTTCCACCTGTCGCTGCTGGTGCTCCTGGTTGGCATCGCCGCCGGCAAGCTGGTCGGGTTCGAGGGCCGGGTGGCGGTCA
CCGAGGGCGGAACCTTCGCCAATGACCTCTCCCAGTACGACGCCTTCTCCCCCTCGGCGTGGACCGACGTGGACGACCTG
GAGCCGTTGGCCTTCCGCCTGGAGGAGTTCGACGTCTCGTACCAGACCAGCGGACGCAACCTCGGTCAGCCCTCACAGTT
CGCCGCCCGGCTCGCCTACCGCGCCGGGGGCGGTGAGGAGCAGACCGTCACAGTCGAGCCCAACCACCCGCTCGACGTCA
ACGAGACGAAGTTCTTCCTCACGGGCAACGGATACGCCCCCGTTGTCACCGTGCGCGACGGGCGTGGCAAGGCCGTGTTC
ACCGGACCGGTGCAGTTCTTGCCGCTGGACACCAGCTACGCCTCCGACGGCGTGATCAAGGCGCCGGACGCCCAGCCCAC
CCAGCTCGCCTTCGAGGGCTTCTTCCTGCCCACCGCCGACGTCGGCCCGCAAGGCCCCTACTCGATGTTCCCCGACACCC
TGAACCCCCAACTGTTCCTCACCGCTTACACCGGCGACCTCGGGTTCGCCGACGGCGTCCCGCAGTCGGTGTTCACCCTC
GACAAGGACGAGCTCACCCAGGTGCGCCGCAACGGGAAGCCCTTCAGCCAGGCTCTGTCCGTCGGTGAGACCATGCGGCT
TCCCGGCGGTCAAGGCAGCCTCACCTTCGACGGCGTGTCCCGGTTCGCCAACTTCCAGATCGCCTACGACCCCGGCAAGG
AGATCACCCTCGCCGCCGCGGTCGTCCTCCTCGTCGGCCTCACCGCCTCACTGGCCATCCGCCGCCGCCGGCTGTGGCTG
CGGGTTCGCCCCACCGAGGACGGCGGGGCCCTTGTCGAGGTCGCCGGCTACTCCCTGACCCGCCGTGAACCTCCCCCCGA
CGAGATCCAGGACCTCGTCGCCGCGCTGCACGGCCCGGACCACCCCTCCATTACCGCTAGCAAGGACGCCTCCGCATGA

Upstream 100 bases:

>100_bases
ACGCCCAAGGTCGCCTCGCCGCCAGAATCGTCGGCCCCGTCGACTACTCGACGTTGTCGACGATCGTCACCGAGACCGCA
GCGGAATCGGGGGCCGGGCA

Downstream 100 bases:

>100_bases
TCCTCGACGAGCAGACATTCGCCCAGCTCTCCAACGGCCTGGTGTACTCCGCCATCGCCGTCTACGCCCTGGCCATGCTG
GCCTACGCCGCCGAAACCGC

Product: ResB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MTDVKTKATEAAPAGTAQAPPSWGWLRWAWRTLTSMRTAVVLLGLLALAAIPGSVFPQRNVATDPAAVQQYVLEHPRLAP
WLDRLGMFDVYASSWFAAIYVLLLVSMTGCVLPRSRRLWQSARSAPPAAPRNLARFESHRAWETTREPAEVIATAAAHLR
RGRFRVVASRDEVRAERGYLREVGNLAFHLSLLVLLVGIAAGKLVGFEGRVAVTEGGTFANDLSQYDAFSPSAWTDVDDL
EPLAFRLEEFDVSYQTSGRNLGQPSQFAARLAYRAGGGEEQTVTVEPNHPLDVNETKFFLTGNGYAPVVTVRDGRGKAVF
TGPVQFLPLDTSYASDGVIKAPDAQPTQLAFEGFFLPTADVGPQGPYSMFPDTLNPQLFLTAYTGDLGFADGVPQSVFTL
DKDELTQVRRNGKPFSQALSVGETMRLPGGQGSLTFDGVSRFANFQIAYDPGKEITLAAAVVLLVGLTASLAIRRRRLWL
RVRPTEDGGALVEVAGYSLTRREPPPDEIQDLVAALHGPDHPSITASKDASA

Sequences:

>Translated_532_residues
MTDVKTKATEAAPAGTAQAPPSWGWLRWAWRTLTSMRTAVVLLGLLALAAIPGSVFPQRNVATDPAAVQQYVLEHPRLAP
WLDRLGMFDVYASSWFAAIYVLLLVSMTGCVLPRSRRLWQSARSAPPAAPRNLARFESHRAWETTREPAEVIATAAAHLR
RGRFRVVASRDEVRAERGYLREVGNLAFHLSLLVLLVGIAAGKLVGFEGRVAVTEGGTFANDLSQYDAFSPSAWTDVDDL
EPLAFRLEEFDVSYQTSGRNLGQPSQFAARLAYRAGGGEEQTVTVEPNHPLDVNETKFFLTGNGYAPVVTVRDGRGKAVF
TGPVQFLPLDTSYASDGVIKAPDAQPTQLAFEGFFLPTADVGPQGPYSMFPDTLNPQLFLTAYTGDLGFADGVPQSVFTL
DKDELTQVRRNGKPFSQALSVGETMRLPGGQGSLTFDGVSRFANFQIAYDPGKEITLAAAVVLLVGLTASLAIRRRRLWL
RVRPTEDGGALVEVAGYSLTRREPPPDEIQDLVAALHGPDHPSITASKDASA
>Mature_531_residues
TDVKTKATEAAPAGTAQAPPSWGWLRWAWRTLTSMRTAVVLLGLLALAAIPGSVFPQRNVATDPAAVQQYVLEHPRLAPW
LDRLGMFDVYASSWFAAIYVLLLVSMTGCVLPRSRRLWQSARSAPPAAPRNLARFESHRAWETTREPAEVIATAAAHLRR
GRFRVVASRDEVRAERGYLREVGNLAFHLSLLVLLVGIAAGKLVGFEGRVAVTEGGTFANDLSQYDAFSPSAWTDVDDLE
PLAFRLEEFDVSYQTSGRNLGQPSQFAARLAYRAGGGEEQTVTVEPNHPLDVNETKFFLTGNGYAPVVTVRDGRGKAVFT
GPVQFLPLDTSYASDGVIKAPDAQPTQLAFEGFFLPTADVGPQGPYSMFPDTLNPQLFLTAYTGDLGFADGVPQSVFTLD
KDELTQVRRNGKPFSQALSVGETMRLPGGQGSLTFDGVSRFANFQIAYDPGKEITLAAAVVLLVGLTASLAIRRRRLWLR
VRPTEDGGALVEVAGYSLTRREPPPDEIQDLVAALHGPDHPSITASKDASA

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 57711; Mature: 57580

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVKTKATEAAPAGTAQAPPSWGWLRWAWRTLTSMRTAVVLLGLLALAAIPGSVFPQRN
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VATDPAAVQQYVLEHPRLAPWLDRLGMFDVYASSWFAAIYVLLLVSMTGCVLPRSRRLWQ
CCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SARSAPPAAPRNLARFESHRAWETTREPAEVIATAAAHLRRGRFRVVASRDEVRAERGYL
HHHCCCCCCCHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHH
REVGNLAFHLSLLVLLVGIAAGKLVGFEGRVAVTEGGTFANDLSQYDAFSPSAWTDVDDL
HHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
EPLAFRLEEFDVSYQTSGRNLGQPSQFAARLAYRAGGGEEQTVTVEPNHPLDVNETKFFL
CHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEE
TGNGYAPVVTVRDGRGKAVFTGPVQFLPLDTSYASDGVIKAPDAQPTQLAFEGFFLPTAD
ECCCCEEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEECCCCCCCEEEEEEEECCCCC
VGPQGPYSMFPDTLNPQLFLTAYTGDLGFADGVPQSVFTLDKDELTQVRRNGKPFSQALS
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHEECCHHHHHHHHHCCCCHHHHHC
VGETMRLPGGQGSLTFDGVSRFANFQIAYDPGKEITLAAAVVLLVGLTASLAIRRRRLWL
CCCEEECCCCCCCEEHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE
RVRPTEDGGALVEVAGYSLTRREPPPDEIQDLVAALHGPDHPSITASKDASA
EEECCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure 
TDVKTKATEAAPAGTAQAPPSWGWLRWAWRTLTSMRTAVVLLGLLALAAIPGSVFPQRN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VATDPAAVQQYVLEHPRLAPWLDRLGMFDVYASSWFAAIYVLLLVSMTGCVLPRSRRLWQ
CCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SARSAPPAAPRNLARFESHRAWETTREPAEVIATAAAHLRRGRFRVVASRDEVRAERGYL
HHHCCCCCCCHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHH
REVGNLAFHLSLLVLLVGIAAGKLVGFEGRVAVTEGGTFANDLSQYDAFSPSAWTDVDDL
HHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
EPLAFRLEEFDVSYQTSGRNLGQPSQFAARLAYRAGGGEEQTVTVEPNHPLDVNETKFFL
CHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEE
TGNGYAPVVTVRDGRGKAVFTGPVQFLPLDTSYASDGVIKAPDAQPTQLAFEGFFLPTAD
ECCCCEEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEECCCCCCCEEEEEEEECCCCC
VGPQGPYSMFPDTLNPQLFLTAYTGDLGFADGVPQSVFTLDKDELTQVRRNGKPFSQALS
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHEECCHHHHHHHHHCCCCHHHHHC
VGETMRLPGGQGSLTFDGVSRFANFQIAYDPGKEITLAAAVVLLVGLTASLAIRRRRLWL
CCCEEECCCCCCCEEHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE
RVRPTEDGGALVEVAGYSLTRREPPPDEIQDLVAALHGPDHPSITASKDASA
EEECCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA