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The map label for this gene is ccsA [H]

Identifier: 119716429

GI number: 119716429

Start: 2349101

End: 2350084

Strand: Reverse

Name: ccsA [H]

Synonym: Noca_2200

Alternate gene names: 119716429

Gene position: 2350084-2349101 (Counterclockwise)

Preceding gene: 119716430

Following gene: 119716428

Centisome position: 47.13

GC content: 71.04

Gene sequence:

>984_bases
ATGATCCTCGACGAGCAGACATTCGCCCAGCTCTCCAACGGCCTGGTGTACTCCGCCATCGCCGTCTACGCCCTGGCCAT
GCTGGCCTACGCCGCCGAAACCGCCGGACGCATGGCAGGCGCCCAGATGGACGGCGCCGGGGTGGCAAGCGCACGCCTGG
AAGGCGCTCGTGCGGCAGGCACCCAGGAGGCAGACACCGGCACGTTGGTCGCCGACCCGCCATCCCGCAGCCGCCTGCTG
GGCGCGTTCGGCACGTCGCTGACCGTGCTGGCGTTCCTGCTGAATCTCGGCGGCGTGGTCACCCGGGGTCTCGCGGCCGG
CCGGGTGCCGTGGGGCAACATGTACGAGTTCGTGCTCGTGTGCGCCCTCGCAGCCGGCGCGGCGTACCTGGCGTTCCTGT
CCAGGCGCCCGGTCCGGGCCTTCGGCGTCTGGATCGTGGCCATCGTCCTACTCGCCCTCGGCCTGGCCGTCACCGTCCTC
TACGCCCCCGCCGGCGAGCTGGTGCCGGTCCTGGACTCCTACTGGCTGCTGATCCACGTCGCCGCCGCCATCACCGGCGG
CGGCGTCTTCACCGTCGGCGCCGTCGCGACCACCCTGTTCCTGGTCCGCCATCGCCAAGAGCGCCGCGGCACCGCGCAGA
CCCCCAGGGGACGCTACGCCGCCAGCCTCCCCACCACGCGCACCCTGGAGCAGGTCGCCCACACCGCCCACATCTTCGCC
TTCCCGATCTGGACCTTCGCCGTGATGGCCGGCGCCATCTGGGCCGAAAACGCCTGGGGCCGCTACTGGGGCTGGGATCC
CAAGGAGACCTGGGCGTTCATCACCTGGGTCTTATACGCCGCACACCTGCACGCCCAGGCAACCGCCGGGTGGCGCGGCG
TCCGCGCCTCCTGGTTCGCCCTCGCGGGCTACGCCGCGTTCCTGTTCAACTTCTTCGGCGTCAACCTGTGGATCTCTGGA
CTCCACTCCTACGCCGGCGTCTGA

Upstream 100 bases:

>100_bases
TGACCCGCCGTGAACCTCCCCCCGACGAGATCCAGGACCTCGTCGCCGCGCTGCACGGCCCGGACCACCCCTCCATTACC
GCTAGCAAGGACGCCTCCGC

Downstream 100 bases:

>100_bases
CCCACCCCATCGATCGAGGCCTTTGGCCTAGGTTTCGCACTAGATCCGCCGCGGACAGCGCGGCCCACACAAGGAAAGGA
CCGAGACCATCGTTGCCATG

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MILDEQTFAQLSNGLVYSAIAVYALAMLAYAAETAGRMAGAQMDGAGVASARLEGARAAGTQEADTGTLVADPPSRSRLL
GAFGTSLTVLAFLLNLGGVVTRGLAAGRVPWGNMYEFVLVCALAAGAAYLAFLSRRPVRAFGVWIVAIVLLALGLAVTVL
YAPAGELVPVLDSYWLLIHVAAAITGGGVFTVGAVATTLFLVRHRQERRGTAQTPRGRYAASLPTTRTLEQVAHTAHIFA
FPIWTFAVMAGAIWAENAWGRYWGWDPKETWAFITWVLYAAHLHAQATAGWRGVRASWFALAGYAAFLFNFFGVNLWISG
LHSYAGV

Sequences:

>Translated_327_residues
MILDEQTFAQLSNGLVYSAIAVYALAMLAYAAETAGRMAGAQMDGAGVASARLEGARAAGTQEADTGTLVADPPSRSRLL
GAFGTSLTVLAFLLNLGGVVTRGLAAGRVPWGNMYEFVLVCALAAGAAYLAFLSRRPVRAFGVWIVAIVLLALGLAVTVL
YAPAGELVPVLDSYWLLIHVAAAITGGGVFTVGAVATTLFLVRHRQERRGTAQTPRGRYAASLPTTRTLEQVAHTAHIFA
FPIWTFAVMAGAIWAENAWGRYWGWDPKETWAFITWVLYAAHLHAQATAGWRGVRASWFALAGYAAFLFNFFGVNLWISG
LHSYAGV
>Mature_327_residues
MILDEQTFAQLSNGLVYSAIAVYALAMLAYAAETAGRMAGAQMDGAGVASARLEGARAAGTQEADTGTLVADPPSRSRLL
GAFGTSLTVLAFLLNLGGVVTRGLAAGRVPWGNMYEFVLVCALAAGAAYLAFLSRRPVRAFGVWIVAIVLLALGLAVTVL
YAPAGELVPVLDSYWLLIHVAAAITGGGVFTVGAVATTLFLVRHRQERRGTAQTPRGRYAASLPTTRTLEQVAHTAHIFA
FPIWTFAVMAGAIWAENAWGRYWGWDPKETWAFITWVLYAAHLHAQATAGWRGVRASWFALAGYAAFLFNFFGVNLWISG
LHSYAGV

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 34872; Mature: 34872

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDEQTFAQLSNGLVYSAIAVYALAMLAYAAETAGRMAGAQMDGAGVASARLEGARAAG
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHCC
TQEADTGTLVADPPSRSRLLGAFGTSLTVLAFLLNLGGVVTRGLAAGRVPWGNMYEFVLV
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
CALAAGAAYLAFLSRRPVRAFGVWIVAIVLLALGLAVTVLYAPAGELVPVLDSYWLLIHV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AAAITGGGVFTVGAVATTLFLVRHRQERRGTAQTPRGRYAASLPTTRTLEQVAHTAHIFA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH
FPIWTFAVMAGAIWAENAWGRYWGWDPKETWAFITWVLYAAHLHAQATAGWRGVRASWFA
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LAGYAAFLFNFFGVNLWISGLHSYAGV
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILDEQTFAQLSNGLVYSAIAVYALAMLAYAAETAGRMAGAQMDGAGVASARLEGARAAG
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHCC
TQEADTGTLVADPPSRSRLLGAFGTSLTVLAFLLNLGGVVTRGLAAGRVPWGNMYEFVLV
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
CALAAGAAYLAFLSRRPVRAFGVWIVAIVLLALGLAVTVLYAPAGELVPVLDSYWLLIHV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AAAITGGGVFTVGAVATTLFLVRHRQERRGTAQTPRGRYAASLPTTRTLEQVAHTAHIFA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH
FPIWTFAVMAGAIWAENAWGRYWGWDPKETWAFITWVLYAAHLHAQATAGWRGVRASWFA
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LAGYAAFLFNFFGVNLWISGLHSYAGV
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]