| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715383
Identifier: 119715383
GI number: 119715383
Start: 1215764
End: 1216225
Strand: Direct
Name: 119715383
Synonym: Noca_1145
Alternate gene names: NA
Gene position: 1215764-1216225 (Clockwise)
Preceding gene: 119715378
Following gene: 119715386
Centisome position: 24.38
GC content: 69.26
Gene sequence:
>462_bases ATGCGTTCGCCACGACTGACCCTGGCCGTGACCGCCCTCGCCACGGCGCTTGCGCTCTCCGCCTGCAGTGGCAGCGGCAG CGACGACGGCTCCGGCACCAAGGCCGATCCGAGCGACACCGCTGCGCCTGAGAGCCAGGCCGACTGCGAGGCGACGGTGA AGCTCACCGGCGACGTCAAGGCGTCGTGGTCCGGTCCCGGCTACGTCATCACCGGAGGCGGGAACCAGGCCTTCTACAAG ACGAGTCAAGGGAAGAAGAGCGTGTCGATCATCCCGGGCCGTGGCGACGAGCCTGCCACACCAATCGTGGCGGCCGGTGG GACGACCTTCACCGTCCAGCCCGGGGAGGGCGAGGTTGACGTGGATCCCGACGGCGGTGGCGCCGAGGTCGACGCCGACG CGACCGCCACCAAGAAGGGCAAGAACGTCACGCTCCACCTGGTCGCGAGCTTCGACTGCTGA
Upstream 100 bases:
>100_bases GAGACGCTACGGTCCAAACGCGCGCCCGTCGAGCCGTTCGGCTAGGTCGGCCCACGGCCCGTCCGGGACCGGTCTGGGCC AGCATGCTTGACTTGCGGCC
Downstream 100 bases:
>100_bases GCGCACTCTCAGATCAGACGAAGGCGACCGCGAGGAGCAGCGCTCCGACCACGACGGCGAGCGTGAGCACGAAGCCCAGC CCGAAGCCCGGCAGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRSPRLTLAVTALATALALSACSGSGSDDGSGTKADPSDTAAPESQADCEATVKLTGDVKASWSGPGYVITGGGNQAFYK TSQGKKSVSIIPGRGDEPATPIVAAGGTTFTVQPGEGEVDVDPDGGGAEVDADATATKKGKNVTLHLVASFDC
Sequences:
>Translated_153_residues MRSPRLTLAVTALATALALSACSGSGSDDGSGTKADPSDTAAPESQADCEATVKLTGDVKASWSGPGYVITGGGNQAFYK TSQGKKSVSIIPGRGDEPATPIVAAGGTTFTVQPGEGEVDVDPDGGGAEVDADATATKKGKNVTLHLVASFDC >Mature_153_residues MRSPRLTLAVTALATALALSACSGSGSDDGSGTKADPSDTAAPESQADCEATVKLTGDVKASWSGPGYVITGGGNQAFYK TSQGKKSVSIIPGRGDEPATPIVAAGGTTFTVQPGEGEVDVDPDGGGAEVDADATATKKGKNVTLHLVASFDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15133; Mature: 15133
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPRLTLAVTALATALALSACSGSGSDDGSGTKADPSDTAAPESQADCEATVKLTGDVK CCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEE ASWSGPGYVITGGGNQAFYKTSQGKKSVSIIPGRGDEPATPIVAAGGTTFTVQPGEGEVD ECCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCCEE VDPDGGGAEVDADATATKKGKNVTLHLVASFDC ECCCCCCCEECCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MRSPRLTLAVTALATALALSACSGSGSDDGSGTKADPSDTAAPESQADCEATVKLTGDVK CCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEE ASWSGPGYVITGGGNQAFYKTSQGKKSVSIIPGRGDEPATPIVAAGGTTFTVQPGEGEVD ECCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCCEE VDPDGGGAEVDADATATKKGKNVTLHLVASFDC ECCCCCCCEECCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA