| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715378
Identifier: 119715378
GI number: 119715378
Start: 1211702
End: 1213423
Strand: Direct
Name: 119715378
Synonym: Noca_1140
Alternate gene names: NA
Gene position: 1211702-1213423 (Clockwise)
Preceding gene: 119715375
Following gene: 119715383
Centisome position: 24.3
GC content: 74.45
Gene sequence:
>1722_bases ATGTTTCGCAGCAATTCGGACGAGCCTGTCCAGACCGGCCTTGTGCGAGGATCCCGGCTCGTGGACACCGAAGTGACCGA TGTGGTCGTGGTCGGAGCCGGTCTCGCGGGGCTCGCGGCGGCCGCCGAGATCGCCGACGCGGGACGCCGGGTGGTGCTCC TCGACCAGGAGCCCGAGCAGTCGCTGGGCGGCCAGGCGTTCTGGAGCCTGGGCGGGCTGTTCCTGGTCGACAGCCCCGAG CAGCGCCGGATGGGCATCAAGGACTCGCGCGAGCTGGCGCTGCAGGACTGGCTCGGCAGCGCGCAGTTCGACCGCGAGGA GGACCGGTGGCCGCGGCGCTGGGCCGAGGCGTACGTCGACTTCGCGGCCGGTGAGAAGCGCGCCTGGCTGCGCGCGATGG GGCACCGGCTGTTCCCGGTCGTCGGCTGGGCCGAGCGCGGGGACGGCCGCGCGGAGGGGCACGGCAACTCGGTGCCCCGC TTCCACCTGACCTGGGGCACCGGCCCCGGCGTGGTCGAGCCGTTCGAGCGCCGGGTGCGCGAGCACGCCGCGACCGGCCG GCTCCGGCTGGCGTTCCGGCACCGGGTCGACGAGCTGGTGGTCGAGGCCGGCGTCGCGGTCGGCGTACGCGGCCAGGTCC TGGAGCCGAGCACCGTCGCCCGCGGCCGGGCCAGCAGCCGGGTCGAGACCGGCGACTTCGAGCTGCGCGCTCAGGCGGTC GTCGTCACCAGCGGCGGCATCGGCGGCAACCACGACCTGGTCCGCCGGACCTGGCCGGCGCGGCTCGGCACGCCGCCGCG GACCATGGTCTCGGGCGTGCCCGCCCACGTCGACGGGCGGATGCTGGCGATCACCGAGGCCGCCGGTGCCCGGGTGATCA ACCCGGACCGGATGTGGCACTACGTCGAGGGCGTGCGCAACTGGGACCCGATCTGGGAGAACCACGGCATCCGGATCCTG CCCGGCCCCTCCTCGCTGTGGCTGGACGCGACCGGGCGGCGGCTGCCGGCGCCGTACTTCCCGGGCTTCGACACCCTCGG CACCCTCGCGCACCTGCGCACCACCGGCTACGACTACTCGTGGTTCGTGCTGACCCAGAAGATCATCGAGAAGGAGTTCG CGCTCTCCGGCTCCGAGCAGAACCCGGACCTCACCGGCAAGGACGTCCGGCTGCTGCTCTCCCGGGTGCGGCCCGGCGCG CCCGGCCCGGTCGAGGCGTTCAAGCAGCACGGCGCGGACTTCGTGGTCGCGGGCGACCTCGGCGAGCTCGTGCGCGGCAT GAACCGGGTCGCCGACCCCGAGGCGCCCCGGATCGTCGAGGCCGAGCTGCGCGACCTGATCGAGCAGCGGGACCGCGAGA TCGACAACGACTACGGCAAGGACGCCCAGGTGACCGCGATCCGCGGTGCCCGGCGCTACCGCGGCGACCGGCTGATCCGG GTCGCCACGCCGCACCGCCTGCTGGACCCCAAGGCCGGCCCGCTGATCGCCGTACGCCTCAACATCTTGACCCGCAAGAC CCTCGGCGGCCTGGAGACCGACCTCGACGGCCGCTGCCTGACCGCGGCCGGGGAGCCGCTGCCCGGCCTGTACGCCGCCG GCGAGGTCGCCGGCTTCGGTGGCGGCGGGATGATGGGCTACAACGCGCTCGAGGGCACCTTCCTGGGCGGCTGCCTGTTC TCGGGCCGTACGGCGGGCCGCGCCGCCGCCCGCGCGGTCTGA
Upstream 100 bases:
>100_bases TCAACACCAGGAACTCCCTCCCAAGACGCCACTTCGGCCGGTCGGGAGGTTTCCGGAGGATTTCCACCCGAGGCGAGGTT CAGTGTGGCGTGTGTGACGG
Downstream 100 bases:
>100_bases TCGGCGGACGTTCAGTACGCCGTGCGGTCCGCCTTGCCGAGCCAGGCCTCGAACGGCGCGAACGGCGCGGCGTGCGTGCC CTGCTCGACCCGGGTCGGCC
Product: putative FAD-binding dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MFRSNSDEPVQTGLVRGSRLVDTEVTDVVVVGAGLAGLAAAAEIADAGRRVVLLDQEPEQSLGGQAFWSLGGLFLVDSPE QRRMGIKDSRELALQDWLGSAQFDREEDRWPRRWAEAYVDFAAGEKRAWLRAMGHRLFPVVGWAERGDGRAEGHGNSVPR FHLTWGTGPGVVEPFERRVREHAATGRLRLAFRHRVDELVVEAGVAVGVRGQVLEPSTVARGRASSRVETGDFELRAQAV VVTSGGIGGNHDLVRRTWPARLGTPPRTMVSGVPAHVDGRMLAITEAAGARVINPDRMWHYVEGVRNWDPIWENHGIRIL PGPSSLWLDATGRRLPAPYFPGFDTLGTLAHLRTTGYDYSWFVLTQKIIEKEFALSGSEQNPDLTGKDVRLLLSRVRPGA PGPVEAFKQHGADFVVAGDLGELVRGMNRVADPEAPRIVEAELRDLIEQRDREIDNDYGKDAQVTAIRGARRYRGDRLIR VATPHRLLDPKAGPLIAVRLNILTRKTLGGLETDLDGRCLTAAGEPLPGLYAAGEVAGFGGGGMMGYNALEGTFLGGCLF SGRTAGRAAARAV
Sequences:
>Translated_573_residues MFRSNSDEPVQTGLVRGSRLVDTEVTDVVVVGAGLAGLAAAAEIADAGRRVVLLDQEPEQSLGGQAFWSLGGLFLVDSPE QRRMGIKDSRELALQDWLGSAQFDREEDRWPRRWAEAYVDFAAGEKRAWLRAMGHRLFPVVGWAERGDGRAEGHGNSVPR FHLTWGTGPGVVEPFERRVREHAATGRLRLAFRHRVDELVVEAGVAVGVRGQVLEPSTVARGRASSRVETGDFELRAQAV VVTSGGIGGNHDLVRRTWPARLGTPPRTMVSGVPAHVDGRMLAITEAAGARVINPDRMWHYVEGVRNWDPIWENHGIRIL PGPSSLWLDATGRRLPAPYFPGFDTLGTLAHLRTTGYDYSWFVLTQKIIEKEFALSGSEQNPDLTGKDVRLLLSRVRPGA PGPVEAFKQHGADFVVAGDLGELVRGMNRVADPEAPRIVEAELRDLIEQRDREIDNDYGKDAQVTAIRGARRYRGDRLIR VATPHRLLDPKAGPLIAVRLNILTRKTLGGLETDLDGRCLTAAGEPLPGLYAAGEVAGFGGGGMMGYNALEGTFLGGCLF SGRTAGRAAARAV >Mature_573_residues MFRSNSDEPVQTGLVRGSRLVDTEVTDVVVVGAGLAGLAAAAEIADAGRRVVLLDQEPEQSLGGQAFWSLGGLFLVDSPE QRRMGIKDSRELALQDWLGSAQFDREEDRWPRRWAEAYVDFAAGEKRAWLRAMGHRLFPVVGWAERGDGRAEGHGNSVPR FHLTWGTGPGVVEPFERRVREHAATGRLRLAFRHRVDELVVEAGVAVGVRGQVLEPSTVARGRASSRVETGDFELRAQAV VVTSGGIGGNHDLVRRTWPARLGTPPRTMVSGVPAHVDGRMLAITEAAGARVINPDRMWHYVEGVRNWDPIWENHGIRIL PGPSSLWLDATGRRLPAPYFPGFDTLGTLAHLRTTGYDYSWFVLTQKIIEKEFALSGSEQNPDLTGKDVRLLLSRVRPGA PGPVEAFKQHGADFVVAGDLGELVRGMNRVADPEAPRIVEAELRDLIEQRDREIDNDYGKDAQVTAIRGARRYRGDRLIR VATPHRLLDPKAGPLIAVRLNILTRKTLGGLETDLDGRCLTAAGEPLPGLYAAGEVAGFGGGGMMGYNALEGTFLGGCLF SGRTAGRAAARAV
Specific function: Able to catalyze the elimination of the C-1 and C-2 hydrogen atoms of the A-ring from the polycyclic ring structure of 3-ketosteroids [H]
COG id: COG3573
COG function: function code R; Predicted oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62371; Mature: 62371
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSNSDEPVQTGLVRGSRLVDTEVTDVVVVGAGLAGLAAAAEIADAGRRVVLLDQEPEQ CCCCCCCCHHHHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHH SLGGQAFWSLGGLFLVDSPEQRRMGIKDSRELALQDWLGSAQFDREEDRWPRRWAEAYVD HCCCHHHHHCCCEEEECCCHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH FAAGEKRAWLRAMGHRLFPVVGWAERGDGRAEGHGNSVPRFHLTWGTGPGVVEPFERRVR HHCCCHHHHHHHHCCHHCEEEEEHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH EHAATGRLRLAFRHRVDELVVEAGVAVGVRGQVLEPSTVARGRASSRVETGDFELRAQAV HHHHCCCEEHHHHHHHHHHHHHCCCEECCCCCEECCHHHHCCCCCCCCCCCCEEEEEEEE VVTSGGIGGNHDLVRRTWPARLGTPPRTMVSGVPAHVDGRMLAITEAAGARVINPDRMWH EEEECCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEECHHHHHH YVEGVRNWDPIWENHGIRILPGPSSLWLDATGRRLPAPYFPGFDTLGTLAHLRTTGYDYS HHHHCCCCCCHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE WFVLTQKIIEKEFALSGSEQNPDLTGKDVRLLLSRVRPGAPGPVEAFKQHGADFVVAGDL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCH GELVRGMNRVADPEAPRIVEAELRDLIEQRDREIDNDYGKDAQVTAIRGARRYRGDRLIR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCEEEE VATPHRLLDPKAGPLIAVRLNILTRKTLGGLETDLDGRCLTAAGEPLPGLYAAGEVAGFG EECCCHHCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEECCCCCCCCCEECCCCCCCC GGGMMGYNALEGTFLGGCLFSGRTAGRAAARAV CCCCCCCHHHCCCEEEHHHCCCCCCCCHHHCCC >Mature Secondary Structure MFRSNSDEPVQTGLVRGSRLVDTEVTDVVVVGAGLAGLAAAAEIADAGRRVVLLDQEPEQ CCCCCCCCHHHHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHH SLGGQAFWSLGGLFLVDSPEQRRMGIKDSRELALQDWLGSAQFDREEDRWPRRWAEAYVD HCCCHHHHHCCCEEEECCCHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH FAAGEKRAWLRAMGHRLFPVVGWAERGDGRAEGHGNSVPRFHLTWGTGPGVVEPFERRVR HHCCCHHHHHHHHCCHHCEEEEEHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH EHAATGRLRLAFRHRVDELVVEAGVAVGVRGQVLEPSTVARGRASSRVETGDFELRAQAV HHHHCCCEEHHHHHHHHHHHHHCCCEECCCCCEECCHHHHCCCCCCCCCCCCEEEEEEEE VVTSGGIGGNHDLVRRTWPARLGTPPRTMVSGVPAHVDGRMLAITEAAGARVINPDRMWH EEEECCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEECHHHHHH YVEGVRNWDPIWENHGIRILPGPSSLWLDATGRRLPAPYFPGFDTLGTLAHLRTTGYDYS HHHHCCCCCCHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE WFVLTQKIIEKEFALSGSEQNPDLTGKDVRLLLSRVRPGAPGPVEAFKQHGADFVVAGDL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCH GELVRGMNRVADPEAPRIVEAELRDLIEQRDREIDNDYGKDAQVTAIRGARRYRGDRLIR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCEEEE VATPHRLLDPKAGPLIAVRLNILTRKTLGGLETDLDGRCLTAAGEPLPGLYAAGEVAGFG EECCCHHCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEECCCCCCCCCEECCCCCCCC GGGMMGYNALEGTFLGGCLFSGRTAGRAAARAV CCCCCCCHHHCCCEEEHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]