| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715363
Identifier: 119715363
GI number: 119715363
Start: 1191382
End: 1192818
Strand: Direct
Name: 119715363
Synonym: Noca_1125
Alternate gene names: NA
Gene position: 1191382-1192818 (Clockwise)
Preceding gene: 119715362
Following gene: 119715364
Centisome position: 23.9
GC content: 71.05
Gene sequence:
>1437_bases GTGACGCGCACCCCCCCGACGACGTCCCGACCCGGGACCCGGCGCCGCGACGACCGCGGCTCGGCGATGATCCTGACGAT GATGGCGCTCGTGCTGATCACGGGGCTCGCCTCGACCGTGGCCGTGCTCACCATCGACAACCTGCGCTCGTCGTGGCGGG CCCAGCAGGCCGGGTCCGCGGTCAACGCCGCGGACGCGGGCGTCGCGCAGGCGATGACCTACCTGCGCAGCGCCGGGGTG CGCCCGCTGCGCTGCTCGCCGGGCTGCACCGGCAACTCCTGGGGCAACAAGGACGCCCCGACGACGGTCTCGCTGCCCGG CGGCGCGGGCGAGTCCTACCGGGTGTGGATCGAGGCGGTCTCGCCGTACCCGGCCAACGACCCGGGCCTGTACCGGATCC ACTCGACCGGCGGCGCGGCCGGATCCGCCTCGCGCACCGTGCTCGCGGACGTCAGCGTCACCACGACCGAGGTGCCGCGC GGCATCTTCGCCCACACGATCAGCGGCGGCGGCTCGGCGAGCGTCACCCGGCAGAGCGTGTTCTCGACCGGCTGCGTCTG GGAGCGCGACAAGATCGCGATGGTGCCGGGCCAGATCGACGTCGCGTACGGCATCCCGATCGGCGTGCACACCTCCGACT ACATCACCACCGCCCACGGCTCGGGCCAGCACTGCTCCGAGACGCAGGGGGGCCTGATCCACGCGACCGGCACCGGCAAC AACGTCACCTCGGCCCCGTGCAGCACGGCGTACCCCTATGACCAGGACCGGGCGGGCGGCAGCCTCATCGGCACCCCGTG CGAGTCCGTGCAGACCAGCTACCCCAAGTACTACGGGCCGCAGAATCTCGACGCCGGGCCGGAGGCCGACGTCGCCGGGT CCTTCGTCAAGGACGACGCCACCCTCGCCCGGCTGTTCAACCTCAAGGACCCCGCCCTCAGCCCGACCCAGCTCGACCAG CTGCGCAGCGTCGCGCGGGCCCAGGGGAACTACTGGACCAGCTCGACCGTGTGGTCCAGCCCGGACGAGGAGAACGCCGT CATGTTCTTCGACCTCACGAAGGGCTCGGACCTCGGCGGCACCGTCGACCTGAACAAGATCAGCGACACCGCGTTCGGTC GGGAGGCCAACCTGGCCGACACCGACCCCCGGTGCACCTCGCGCTCGCTGGTGATCGTGGTCGACGGAGGCAACGTGAAG GTCAACTCCAACCAGCGGCTGTTCGCCTCGCTCTTCCTCACCTCCGCCGCGCCCTACGGTCAGGTCGTGAAGGCCAACGG CACCGCGGACTTCATCGGCACGATCTACGCCGACAAGGTCAACCTGGTCGGCAACTTCGACGCCTCGATGGACACCTGCT TCCTCGCCAACACCAGCCCCGCCCTGCTCGACTTCCGGGCCGGCTCCTACCGCGAGGACGACCGCGGGCTCTCCTGA
Upstream 100 bases:
>100_bases TGCTCCACATCGACCTGGTCGGCGTGACCATCACGGTCCGCGACGGCAGCGGCGAGCAGACCTACCACACCCAGATCGAC CTCCGGAACAGGAGCTGACG
Downstream 100 bases:
>100_bases CGAGGCTCCCCGCCAGCAGTCCTCAAGCCGACGGCCCCGTCGGCCGATGACCCTGATGACCCCTCATCAGTCCCGCGCTC GGAGGACCTGTTGAACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MTRTPPTTSRPGTRRRDDRGSAMILTMMALVLITGLASTVAVLTIDNLRSSWRAQQAGSAVNAADAGVAQAMTYLRSAGV RPLRCSPGCTGNSWGNKDAPTTVSLPGGAGESYRVWIEAVSPYPANDPGLYRIHSTGGAAGSASRTVLADVSVTTTEVPR GIFAHTISGGGSASVTRQSVFSTGCVWERDKIAMVPGQIDVAYGIPIGVHTSDYITTAHGSGQHCSETQGGLIHATGTGN NVTSAPCSTAYPYDQDRAGGSLIGTPCESVQTSYPKYYGPQNLDAGPEADVAGSFVKDDATLARLFNLKDPALSPTQLDQ LRSVARAQGNYWTSSTVWSSPDEENAVMFFDLTKGSDLGGTVDLNKISDTAFGREANLADTDPRCTSRSLVIVVDGGNVK VNSNQRLFASLFLTSAAPYGQVVKANGTADFIGTIYADKVNLVGNFDASMDTCFLANTSPALLDFRAGSYREDDRGLS
Sequences:
>Translated_478_residues MTRTPPTTSRPGTRRRDDRGSAMILTMMALVLITGLASTVAVLTIDNLRSSWRAQQAGSAVNAADAGVAQAMTYLRSAGV RPLRCSPGCTGNSWGNKDAPTTVSLPGGAGESYRVWIEAVSPYPANDPGLYRIHSTGGAAGSASRTVLADVSVTTTEVPR GIFAHTISGGGSASVTRQSVFSTGCVWERDKIAMVPGQIDVAYGIPIGVHTSDYITTAHGSGQHCSETQGGLIHATGTGN NVTSAPCSTAYPYDQDRAGGSLIGTPCESVQTSYPKYYGPQNLDAGPEADVAGSFVKDDATLARLFNLKDPALSPTQLDQ LRSVARAQGNYWTSSTVWSSPDEENAVMFFDLTKGSDLGGTVDLNKISDTAFGREANLADTDPRCTSRSLVIVVDGGNVK VNSNQRLFASLFLTSAAPYGQVVKANGTADFIGTIYADKVNLVGNFDASMDTCFLANTSPALLDFRAGSYREDDRGLS >Mature_477_residues TRTPPTTSRPGTRRRDDRGSAMILTMMALVLITGLASTVAVLTIDNLRSSWRAQQAGSAVNAADAGVAQAMTYLRSAGVR PLRCSPGCTGNSWGNKDAPTTVSLPGGAGESYRVWIEAVSPYPANDPGLYRIHSTGGAAGSASRTVLADVSVTTTEVPRG IFAHTISGGGSASVTRQSVFSTGCVWERDKIAMVPGQIDVAYGIPIGVHTSDYITTAHGSGQHCSETQGGLIHATGTGNN VTSAPCSTAYPYDQDRAGGSLIGTPCESVQTSYPKYYGPQNLDAGPEADVAGSFVKDDATLARLFNLKDPALSPTQLDQL RSVARAQGNYWTSSTVWSSPDEENAVMFFDLTKGSDLGGTVDLNKISDTAFGREANLADTDPRCTSRSLVIVVDGGNVKV NSNQRLFASLFLTSAAPYGQVVKANGTADFIGTIYADKVNLVGNFDASMDTCFLANTSPALLDFRAGSYREDDRGLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50173; Mature: 50042
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTPPTTSRPGTRRRDDRGSAMILTMMALVLITGLASTVAVLTIDNLRSSWRAQQAGSA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCC VNAADAGVAQAMTYLRSAGVRPLRCSPGCTGNSWGNKDAPTTVSLPGGAGESYRVWIEAV CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEE SPYPANDPGLYRIHSTGGAAGSASRTVLADVSVTTTEVPRGIFAHTISGGGSASVTRQSV CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEHHHCCCCEEEEEECCCCCCCHHHHHH FSTGCVWERDKIAMVPGQIDVAYGIPIGVHTSDYITTAHGSGQHCSETQGGLIHATGTGN HHCCCEEECCCEEECCCEEEEEECCEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCC NVTSAPCSTAYPYDQDRAGGSLIGTPCESVQTSYPKYYGPQNLDAGPEADVAGSFVKDDA CCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCH TLARLFNLKDPALSPTQLDQLRSVARAQGNYWTSSTVWSSPDEENAVMFFDLTKGSDLGG HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCC TVDLNKISDTAFGREANLADTDPRCTSRSLVIVVDGGNVKVNSNQRLFASLFLTSAAPYG EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEEEHHHHCCCCCC QVVKANGTADFIGTIYADKVNLVGNFDASMDTCFLANTSPALLDFRAGSYREDDRGLS CEEECCCCCEEEEEEEECEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TRTPPTTSRPGTRRRDDRGSAMILTMMALVLITGLASTVAVLTIDNLRSSWRAQQAGSA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCC VNAADAGVAQAMTYLRSAGVRPLRCSPGCTGNSWGNKDAPTTVSLPGGAGESYRVWIEAV CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEE SPYPANDPGLYRIHSTGGAAGSASRTVLADVSVTTTEVPRGIFAHTISGGGSASVTRQSV CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEHHHCCCCEEEEEECCCCCCCHHHHHH FSTGCVWERDKIAMVPGQIDVAYGIPIGVHTSDYITTAHGSGQHCSETQGGLIHATGTGN HHCCCEEECCCEEECCCEEEEEECCEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCC NVTSAPCSTAYPYDQDRAGGSLIGTPCESVQTSYPKYYGPQNLDAGPEADVAGSFVKDDA CCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCH TLARLFNLKDPALSPTQLDQLRSVARAQGNYWTSSTVWSSPDEENAVMFFDLTKGSDLGG HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCC TVDLNKISDTAFGREANLADTDPRCTSRSLVIVVDGGNVKVNSNQRLFASLFLTSAAPYG EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEEEHHHHCCCCCC QVVKANGTADFIGTIYADKVNLVGNFDASMDTCFLANTSPALLDFRAGSYREDDRGLS CEEECCCCCEEEEEEEECEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA