| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715341
Identifier: 119715341
GI number: 119715341
Start: 1164146
End: 1166326
Strand: Direct
Name: 119715341
Synonym: Noca_1103
Alternate gene names: NA
Gene position: 1164146-1166326 (Clockwise)
Preceding gene: 119715339
Following gene: 119715342
Centisome position: 23.35
GC content: 63.69
Gene sequence:
>2181_bases GTGGACGGCAAGATGGCCATCGTGGAGACCTTCAAGCGAACGCCGCTCCAGCTGTTCAACCTGCCCCAGCACTTCGTCAT CCCGCTGTTCCAACGTCCGTACGTTTGGAAGGAGGACGAGCAGTGGGAGCCGCTATGGAAGGACATCCGACGGGTCGCCG AGCTCCGAATGAATGAGCCGCACCTGAACCCGCAGCACTTCCTAGGTGCAGTCGTGCTTCAGGCGCACGACGCCGGCAGT AACCGGGTCACCACGTGGAACGTCATCGACGGGCAACAGCGGCTGACGACGCTTCAGGTGCTCATGGACGCCACCAGCGC GGTTCTCGCCCAGGCCGGCGCCGACCGATACGCCAGTCAGCTCGAGTCGCTGACCCACAACTCGGCGAACTTCATCCCGG AGGAGGAGAGCGGGCTGAAGGTCCGGCACCTCAACAACGACCACGAGGCCTTCGACGAGGTCATGGACGCTGAGTCCCCG GTGGATTACGCCAGCCTCAAGCACTCCGAGTCCCGGATCGTGAAGGCGCACCGGTACTTCACGACCGCGGTGTCCCAATG GCTCGGCGCCCCGGATGGCGATGACTTCGGCATCAAGGCCGAGCAGTTGGCGAGCGTGCTCCAGGCGGACCTCCAGCTCG TGACGATCGAGCTGCTGTCGTCGGAGAATTCACAGGAGATCTTCGAGACGCTGAACGCTCGCGGAACTCCGCTCACCGCT GCCGATCTCGTTCGCAACTTCGTCTTCCAGCGTCTCGAGGCCGAGGGTGGTGACACCAAGAAGGCCTACAAGGAGGACTG GCCGTTCGAGACGAAGTTCTGGACCAGGGAGATCAGCGTCGGGCGCTATCTCGTGAGCAGGAGCTCGCTGTTCCTCAATC AGTGGCTCATCGCCAGACTCGGTGAGGAGATTGGTCCCCAGTCGACCTTCAGTCGTTTCAAGTCGTACGTCGAGCACGAT GCCGGCCACAAGATGGCTGACCTCCTGCCTGTCATCAAGGAGCAGGCGGAACGGTACGAGGCCTGGACGGAGGTTGCCGC CAAGCCGAGCGGCAACCTGAGCGTGGTCGAAATGGCTGTCTACCGCATGCAGGCCAGTGGGGTGGAACTGCTCAAGCCGC TTCTGATCTGGCTGCACGAGCCAGGCCGGAACCTTCCGCAAGAGACGATCGAGCGCATCGTCGAGGCGGCCGAGAGCTGG ATCGTGCGGCGGCAACTCCTGAGGCTGACAGGTTCAGACCTCGGCCGGGTCGTGGCTGACATCATCAAGAGGCACAGCGG CTCGCCGGCCGACGATTTGGCCGATCGGGTCGTCACCTACCTGTCTCGCCTCAACGTAGCCAGCACCTACTGGCCAGGGG ACAACGAGATCCGTGTCGCGCTGACGACCGAGTCGGCCTACCGCCGATTCCCACGTGCCCGGCTGCGCTCCTTCCTGGAG GCGATCGAGAACCACTACCGGGCCGAGACCAAGCAGCCACAGGCTGAGCGTTCTGGCTTCCCGATCGAGCACATCCTGCC GCAGAAGTGGCGGGAGAACTGGCCGGTCAGCTCACCCCAAGAAGAGCAGGAACGTCAGGAACGTGTCCACAAGCTGGGCA ATCTGACCCTCCTGACGGGTCCGCTCAATTCGAAGGTCTCCAACGGTCCTTGGGACACGAAGCGCAGGGCCCTCTTGCAG CACAACACGATCAAGCTCACCGGAAGGCTCCTCGACTGGGTCGGCGACGCCGATTGGTCGGAAGCACAGATCGACCAGCG AACAGCAGCGCTCATCGACGTCCTGCTGGAAGTCTGGCCGGTCCCCGAGGGACACAACGGTCAGGTGGTGGACCCCCAGG CCAAGGCGCAAGACTGGATCGAGCTGAAGCATTTGGTCGATGCGGGCCTGATTGCACCGGGGGACAAGTTGATCGCCACT CACCGCGACTTCGCCGGGCGTGAGGCCGAGATCGGTGACGACCTCCGCATCCACTTGGACGGCAAGGCCTTCAGCACCCC GTCCGGAGCAGGACAGCACCTTCGCAAGAAGGCGACGAACGGCTGGTACTTCTGGGCTCTGGCAGACGGACGCCGGCTCC GGGACGTTCGGGCGGAGTTCTTGAGTGCCGCTTCCACCGACGAGGGACAACTCGAGCTGATCGGTGGCGAGCCGGAACCG GCCCCCGACGTACGGAGTTGA
Upstream 100 bases:
>100_bases CGTGAAGAGTCAATGGTTGCCAACGGGCTGGGGTATGGACGCGGGGCAGGGGACGATCACATGAGGACGTCTCTCCCCGA CCTGGCCCGTTCCGTCGGCA
Downstream 100 bases:
>100_bases GAGAATCCGCCAGTGAGCCAGATGACCAAGGAAGTAGAGCGCACGGAGCTCCATCGGACCATCTGGCGCATCGCCAACGA CCTCCGCGGGAGCGTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MDGKMAIVETFKRTPLQLFNLPQHFVIPLFQRPYVWKEDEQWEPLWKDIRRVAELRMNEPHLNPQHFLGAVVLQAHDAGS NRVTTWNVIDGQQRLTTLQVLMDATSAVLAQAGADRYASQLESLTHNSANFIPEEESGLKVRHLNNDHEAFDEVMDAESP VDYASLKHSESRIVKAHRYFTTAVSQWLGAPDGDDFGIKAEQLASVLQADLQLVTIELLSSENSQEIFETLNARGTPLTA ADLVRNFVFQRLEAEGGDTKKAYKEDWPFETKFWTREISVGRYLVSRSSLFLNQWLIARLGEEIGPQSTFSRFKSYVEHD AGHKMADLLPVIKEQAERYEAWTEVAAKPSGNLSVVEMAVYRMQASGVELLKPLLIWLHEPGRNLPQETIERIVEAAESW IVRRQLLRLTGSDLGRVVADIIKRHSGSPADDLADRVVTYLSRLNVASTYWPGDNEIRVALTTESAYRRFPRARLRSFLE AIENHYRAETKQPQAERSGFPIEHILPQKWRENWPVSSPQEEQERQERVHKLGNLTLLTGPLNSKVSNGPWDTKRRALLQ HNTIKLTGRLLDWVGDADWSEAQIDQRTAALIDVLLEVWPVPEGHNGQVVDPQAKAQDWIELKHLVDAGLIAPGDKLIAT HRDFAGREAEIGDDLRIHLDGKAFSTPSGAGQHLRKKATNGWYFWALADGRRLRDVRAEFLSAASTDEGQLELIGGEPEP APDVRS
Sequences:
>Translated_726_residues MDGKMAIVETFKRTPLQLFNLPQHFVIPLFQRPYVWKEDEQWEPLWKDIRRVAELRMNEPHLNPQHFLGAVVLQAHDAGS NRVTTWNVIDGQQRLTTLQVLMDATSAVLAQAGADRYASQLESLTHNSANFIPEEESGLKVRHLNNDHEAFDEVMDAESP VDYASLKHSESRIVKAHRYFTTAVSQWLGAPDGDDFGIKAEQLASVLQADLQLVTIELLSSENSQEIFETLNARGTPLTA ADLVRNFVFQRLEAEGGDTKKAYKEDWPFETKFWTREISVGRYLVSRSSLFLNQWLIARLGEEIGPQSTFSRFKSYVEHD AGHKMADLLPVIKEQAERYEAWTEVAAKPSGNLSVVEMAVYRMQASGVELLKPLLIWLHEPGRNLPQETIERIVEAAESW IVRRQLLRLTGSDLGRVVADIIKRHSGSPADDLADRVVTYLSRLNVASTYWPGDNEIRVALTTESAYRRFPRARLRSFLE AIENHYRAETKQPQAERSGFPIEHILPQKWRENWPVSSPQEEQERQERVHKLGNLTLLTGPLNSKVSNGPWDTKRRALLQ HNTIKLTGRLLDWVGDADWSEAQIDQRTAALIDVLLEVWPVPEGHNGQVVDPQAKAQDWIELKHLVDAGLIAPGDKLIAT HRDFAGREAEIGDDLRIHLDGKAFSTPSGAGQHLRKKATNGWYFWALADGRRLRDVRAEFLSAASTDEGQLELIGGEPEP APDVRS >Mature_726_residues MDGKMAIVETFKRTPLQLFNLPQHFVIPLFQRPYVWKEDEQWEPLWKDIRRVAELRMNEPHLNPQHFLGAVVLQAHDAGS NRVTTWNVIDGQQRLTTLQVLMDATSAVLAQAGADRYASQLESLTHNSANFIPEEESGLKVRHLNNDHEAFDEVMDAESP VDYASLKHSESRIVKAHRYFTTAVSQWLGAPDGDDFGIKAEQLASVLQADLQLVTIELLSSENSQEIFETLNARGTPLTA ADLVRNFVFQRLEAEGGDTKKAYKEDWPFETKFWTREISVGRYLVSRSSLFLNQWLIARLGEEIGPQSTFSRFKSYVEHD AGHKMADLLPVIKEQAERYEAWTEVAAKPSGNLSVVEMAVYRMQASGVELLKPLLIWLHEPGRNLPQETIERIVEAAESW IVRRQLLRLTGSDLGRVVADIIKRHSGSPADDLADRVVTYLSRLNVASTYWPGDNEIRVALTTESAYRRFPRARLRSFLE AIENHYRAETKQPQAERSGFPIEHILPQKWRENWPVSSPQEEQERQERVHKLGNLTLLTGPLNSKVSNGPWDTKRRALLQ HNTIKLTGRLLDWVGDADWSEAQIDQRTAALIDVLLEVWPVPEGHNGQVVDPQAKAQDWIELKHLVDAGLIAPGDKLIAT HRDFAGREAEIGDDLRIHLDGKAFSTPSGAGQHLRKKATNGWYFWALADGRRLRDVRAEFLSAASTDEGQLELIGGEPEP APDVRS
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82198; Mature: 82198
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKMAIVETFKRTPLQLFNLPQHFVIPLFQRPYVWKEDEQWEPLWKDIRRVAELRMNEP CCCCHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC HLNPQHFLGAVVLQAHDAGSNRVTTWNVIDGQQRLTTLQVLMDATSAVLAQAGADRYASQ CCCHHHHHHHHHHEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LESLTHNSANFIPEEESGLKVRHLNNDHEAFDEVMDAESPVDYASLKHSESRIVKAHRYF HHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHH TTAVSQWLGAPDGDDFGIKAEQLASVLQADLQLVTIELLSSENSQEIFETLNARGTPLTA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH ADLVRNFVFQRLEAEGGDTKKAYKEDWPFETKFWTREISVGRYLVSRSSLFLNQWLIARL HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEEIGPQSTFSRFKSYVEHDAGHKMADLLPVIKEQAERYEAWTEVAAKPSGNLSVVEMAV HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YRMQASGVELLKPLLIWLHEPGRNLPQETIERIVEAAESWIVRRQLLRLTGSDLGRVVAD HHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IIKRHSGSPADDLADRVVTYLSRLNVASTYWPGDNEIRVALTTESAYRRFPRARLRSFLE HHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECHHHHHHCHHHHHHHHHH AIENHYRAETKQPQAERSGFPIEHILPQKWRENWPVSSPQEEQERQERVHKLGNLTLLTG HHHHHHHCCCCCCCHHHCCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEC PLNSKVSNGPWDTKRRALLQHNTIKLTGRLLDWVGDADWSEAQIDQRTAALIDVLLEVWP CCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC VPEGHNGQVVDPQAKAQDWIELKHLVDAGLIAPGDKLIATHRDFAGREAEIGDDLRIHLD CCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCCCCCEEEEEC GKAFSTPSGAGQHLRKKATNGWYFWALADGRRLRDVRAEFLSAASTDEGQLELIGGEPEP CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCC APDVRS CCCCCC >Mature Secondary Structure MDGKMAIVETFKRTPLQLFNLPQHFVIPLFQRPYVWKEDEQWEPLWKDIRRVAELRMNEP CCCCHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC HLNPQHFLGAVVLQAHDAGSNRVTTWNVIDGQQRLTTLQVLMDATSAVLAQAGADRYASQ CCCHHHHHHHHHHEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LESLTHNSANFIPEEESGLKVRHLNNDHEAFDEVMDAESPVDYASLKHSESRIVKAHRYF HHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHH TTAVSQWLGAPDGDDFGIKAEQLASVLQADLQLVTIELLSSENSQEIFETLNARGTPLTA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH ADLVRNFVFQRLEAEGGDTKKAYKEDWPFETKFWTREISVGRYLVSRSSLFLNQWLIARL HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEEIGPQSTFSRFKSYVEHDAGHKMADLLPVIKEQAERYEAWTEVAAKPSGNLSVVEMAV HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YRMQASGVELLKPLLIWLHEPGRNLPQETIERIVEAAESWIVRRQLLRLTGSDLGRVVAD HHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IIKRHSGSPADDLADRVVTYLSRLNVASTYWPGDNEIRVALTTESAYRRFPRARLRSFLE HHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECHHHHHHCHHHHHHHHHH AIENHYRAETKQPQAERSGFPIEHILPQKWRENWPVSSPQEEQERQERVHKLGNLTLLTG HHHHHHHCCCCCCCHHHCCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEC PLNSKVSNGPWDTKRRALLQHNTIKLTGRLLDWVGDADWSEAQIDQRTAALIDVLLEVWP CCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC VPEGHNGQVVDPQAKAQDWIELKHLVDAGLIAPGDKLIATHRDFAGREAEIGDDLRIHLD CCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCCCCCEEEEEC GKAFSTPSGAGQHLRKKATNGWYFWALADGRRLRDVRAEFLSAASTDEGQLELIGGEPEP CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCC APDVRS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA