Click here to switch to the map view.

The map label for this gene is 119715339

Identifier: 119715339

GI number: 119715339

Start: 1160302

End: 1161252

Strand: Direct

Name: 119715339

Synonym: Noca_1101

Alternate gene names: NA

Gene position: 1160302-1161252 (Clockwise)

Preceding gene: 119715325

Following gene: 119715341

Centisome position: 23.27

GC content: 66.46

Gene sequence:

>951_bases
GTGGTTCTGGGGACGGTTGGTCTGCTCGGTGAGCCAGAGGATGAGGTCGGTGCGCCAGTAGCGGACGTGGCGGCCGACCT
TGAAGCTGCGGGGTCCGGCGCCGAGGTGGCGCCAGTAGCGCAGGGTGCCTTCGGGAACGCGGAGGAAAGCGCAGGCCTCC
TGGAGGCTGAGCATCTCGTCGCCGAGGCTCTTCGACGGGCGGCGGTTGTCGTCGGGGTTCATCTGCTGTGCGGTCATGGT
GGTGCTCCTCGCTGGTCGATGAGGCCAAGCGGTTCTCGACCTCATCCAGTAGGTGTGCAGGCCCTCCCAATCGATGATCG
GCGATATCCTGTGGCTGTGGACCCGCCGAAGACGGTCATCGAGATCGCCCGCAAAGCCGCGGGTGTCTCGCAGGCGCAGC
TGGCGGTGTGGGCGGGGACCCAGCAGTCGTCGATCTCGGAGTACGAGTCGCGTCGCAAGTCGCCGACCCTGGAAGTGGTG
GAGCGGCTCCTGGAGGCCGCCGACGCCGAGCTCACGATCAAGCCGATCATCGACTTCGACACTCGGCAGGACCCCGAGAT
CGGCCGGTACGTCGTGCCCGAAAAGCTCTGGTCGGTGCCAATGCCGGACTGCTTCAGCAAGATCCAGGTTCTGGGATACC
TCGCCAAGTCCCGCCGACCGCTCGTCTGGGACCTGTCGAACGAGGCCGAGCGCATCGACTACTACCAGTGGGTCATCGGG
CTCGGCGTCATCGACCTCATGCTCGACTCCGTCGATGGCATCCTGTTGATGCAGGTCTGGGATCGGCTGAACCTCCCAGA
GGTGATCCGCGAAGCCTGGCAGCCCGTCATCGACGCGGCCACCGCCCCACAGGACATGCAGCCGCGCGACCCGGCCGGAT
TCAGCGCCTGGATCGCAGGAGAGATGGGCGTCGAGTGGCGGCCGGTCCGCCGGCGCAAGCGGCATCACTAA

Upstream 100 bases:

>100_bases
TTGCCGTTGGCTCGCTTGGCGATGTTTCCCGCCATGGTGATGCTCCTTCCAGGATCGCGCCATCGTCTCTCTGAGATCCG
ACGGTGGGGCAGGGTCAGCG

Downstream 100 bases:

>100_bases
CCTCAGATGCCGATCCCGCCGCCGGATGCCGGGGCCGGTCGACGCGGTTCCTCCACCGTCTCCTGCCGTGACAGGCGACG
CTTCTGGGTGCCGTAGCGAT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MVLGTVGLLGEPEDEVGAPVADVAADLEAAGSGAEVAPVAQGAFGNAEESAGLLEAEHLVAEALRRAAVVVGVHLLCGHG
GAPRWSMRPSGSRPHPVGVQALPIDDRRYPVAVDPPKTVIEIARKAAGVSQAQLAVWAGTQQSSISEYESRRKSPTLEVV
ERLLEAADAELTIKPIIDFDTRQDPEIGRYVVPEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYQWVIG
LGVIDLMLDSVDGILLMQVWDRLNLPEVIREAWQPVIDAATAPQDMQPRDPAGFSAWIAGEMGVEWRPVRRRKRHH

Sequences:

>Translated_316_residues
MVLGTVGLLGEPEDEVGAPVADVAADLEAAGSGAEVAPVAQGAFGNAEESAGLLEAEHLVAEALRRAAVVVGVHLLCGHG
GAPRWSMRPSGSRPHPVGVQALPIDDRRYPVAVDPPKTVIEIARKAAGVSQAQLAVWAGTQQSSISEYESRRKSPTLEVV
ERLLEAADAELTIKPIIDFDTRQDPEIGRYVVPEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYQWVIG
LGVIDLMLDSVDGILLMQVWDRLNLPEVIREAWQPVIDAATAPQDMQPRDPAGFSAWIAGEMGVEWRPVRRRKRHH
>Mature_316_residues
MVLGTVGLLGEPEDEVGAPVADVAADLEAAGSGAEVAPVAQGAFGNAEESAGLLEAEHLVAEALRRAAVVVGVHLLCGHG
GAPRWSMRPSGSRPHPVGVQALPIDDRRYPVAVDPPKTVIEIARKAAGVSQAQLAVWAGTQQSSISEYESRRKSPTLEVV
ERLLEAADAELTIKPIIDFDTRQDPEIGRYVVPEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYQWVIG
LGVIDLMLDSVDGILLMQVWDRLNLPEVIREAWQPVIDAATAPQDMQPRDPAGFSAWIAGEMGVEWRPVRRRKRHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34517; Mature: 34517

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGTVGLLGEPEDEVGAPVADVAADLEAAGSGAEVAPVAQGAFGNAEESAGLLEAEHLV
CCEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHCCHHHHHHHH
AEALRRAAVVVGVHLLCGHGGAPRWSMRPSGSRPHPVGVQALPIDDRRYPVAVDPPKTVI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCHHHHH
EIARKAAGVSQAQLAVWAGTQQSSISEYESRRKSPTLEVVERLLEAADAELTIKPIIDFD
HHHHHHCCCCHHEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCC
TRQDPEIGRYVVPEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYQWVIG
CCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
LGVIDLMLDSVDGILLMQVWDRLNLPEVIREAWQPVIDAATAPQDMQPRDPAGFSAWIAG
HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
EMGVEWRPVRRRKRHH
CCCCCCCHHHHHCCCC
>Mature Secondary Structure
MVLGTVGLLGEPEDEVGAPVADVAADLEAAGSGAEVAPVAQGAFGNAEESAGLLEAEHLV
CCEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHCCHHHHHHHH
AEALRRAAVVVGVHLLCGHGGAPRWSMRPSGSRPHPVGVQALPIDDRRYPVAVDPPKTVI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCHHHHH
EIARKAAGVSQAQLAVWAGTQQSSISEYESRRKSPTLEVVERLLEAADAELTIKPIIDFD
HHHHHHCCCCHHEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCC
TRQDPEIGRYVVPEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYQWVIG
CCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
LGVIDLMLDSVDGILLMQVWDRLNLPEVIREAWQPVIDAATAPQDMQPRDPAGFSAWIAG
HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
EMGVEWRPVRRRKRHH
CCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA