| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ispH [H]
Identifier: 119715315
GI number: 119715315
Start: 1134319
End: 1135383
Strand: Direct
Name: ispH [H]
Synonym: Noca_1075
Alternate gene names: 119715315
Gene position: 1134319-1135383 (Clockwise)
Preceding gene: 119715311
Following gene: 119715316
Centisome position: 22.75
GC content: 71.27
Gene sequence:
>1065_bases ATGGCCAGTCTCGGGCACCGGGCCGACGGGCGGCGGGCGCTCTCCACAGGCCCGGTCCGTAGACTCGGGGTCATGACGGA CCTCGCCACCCCACGCACGCTGACCGAGGCGGAGAAGTCGGTCCTGCTGGCCGCGCCGCGCGGCTACTGTGCCGGCGTCG ACCGGGCGGTGATCACCGTCGAGAAGGCACTGGACCTGTACGGCGCGCCCGTCTACGTGCGCAAGCAGATCGTGCACAAC AAGCACGTGGTCGCCGACCTCGAGTCCCGCGGCGCGATCTTCGTCGAGGAGCTCGACGAAGTTCCCGAGGGCCAGACCGT GGTGTTCTCGGCGCACGGCGTCTCGCCCGAGGTGCACCGGCAGGCCGAGGAGCGATCGCTGAAGACGATCGACGCGACCT GCCCGCTGGTGACCAAGGTCCACCACGAGGCGAAGCGGTTCGCGACCGAGGACTACGACATCCTCCTCATCGGCCACGCC GGCCACGAGGAGGTCGAGGGCACCGCGGGCGAGGCCCCCGGGCACATCCAGCTCGTGCAGGGTCCCGCGGACGTCCCGAA CATCAAGGTCCGCGACCCGAAGCGGGTCGCCTGGCTCTCCCAGACCACGCTGTCGGTCGACGAGACCCTCGAGACCGTCG ACGCGATCCGGGAGCGGTTCCCCGACCTGCTCGACCCGCCGAGCGACGACATCTGCTACGCCACCCAGAACCGTCAGCTG GCGGTCAAGGAGATCGCTCGTGACTCCGACCTCGTGATCGTGGTCGGGTCGGGCAACTCCTCCAACTCGGTGCGACTGGT CGAGGTCGCGCTCGAGGCGGGCGCCCGCGCGGCGCACCGGGTCGACGACGCCTCCGAGATCGACGAGGCCTGGCTCGACG GGGTGCGCACGGTGAGCGTCACCTCCGGCGCCAGCGTGCCAGAGGCGCTGGTCCAGGGCGTGCTCTCCTTCCTGGGCGAG CGCGGGTACCCCGACGCTCGGGCGGTGCACAGCGCCGAGGAGTCGCTGATCTTCGCGCTGCCCCACGAGCTGCGGCGCGA CCTCAAGGCCGCCGGGCGGAGCTGA
Upstream 100 bases:
>100_bases CTCGAGCGAGCTCTCCAGGGCCATGGCCGGGACCCTACCGAGCAGCGCCGACAGACTGCTTCTTCCACGATGGGCCCGGG CCCGGGGCCGGGGCCGGGGC
Downstream 100 bases:
>100_bases GCACCCGGATGGCCCGCTACGTCGACGTACACCCCGAGAACCCCCAGTCCCGCCTGCTCGACCAGATCGCCGACGCGCTG CGCGAGGACCAGCTGATCGC
Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MASLGHRADGRRALSTGPVRRLGVMTDLATPRTLTEAEKSVLLAAPRGYCAGVDRAVITVEKALDLYGAPVYVRKQIVHN KHVVADLESRGAIFVEELDEVPEGQTVVFSAHGVSPEVHRQAEERSLKTIDATCPLVTKVHHEAKRFATEDYDILLIGHA GHEEVEGTAGEAPGHIQLVQGPADVPNIKVRDPKRVAWLSQTTLSVDETLETVDAIRERFPDLLDPPSDDICYATQNRQL AVKEIARDSDLVIVVGSGNSSNSVRLVEVALEAGARAAHRVDDASEIDEAWLDGVRTVSVTSGASVPEALVQGVLSFLGE RGYPDARAVHSAEESLIFALPHELRRDLKAAGRS
Sequences:
>Translated_354_residues MASLGHRADGRRALSTGPVRRLGVMTDLATPRTLTEAEKSVLLAAPRGYCAGVDRAVITVEKALDLYGAPVYVRKQIVHN KHVVADLESRGAIFVEELDEVPEGQTVVFSAHGVSPEVHRQAEERSLKTIDATCPLVTKVHHEAKRFATEDYDILLIGHA GHEEVEGTAGEAPGHIQLVQGPADVPNIKVRDPKRVAWLSQTTLSVDETLETVDAIRERFPDLLDPPSDDICYATQNRQL AVKEIARDSDLVIVVGSGNSSNSVRLVEVALEAGARAAHRVDDASEIDEAWLDGVRTVSVTSGASVPEALVQGVLSFLGE RGYPDARAVHSAEESLIFALPHELRRDLKAAGRS >Mature_353_residues ASLGHRADGRRALSTGPVRRLGVMTDLATPRTLTEAEKSVLLAAPRGYCAGVDRAVITVEKALDLYGAPVYVRKQIVHNK HVVADLESRGAIFVEELDEVPEGQTVVFSAHGVSPEVHRQAEERSLKTIDATCPLVTKVHHEAKRFATEDYDILLIGHAG HEEVEGTAGEAPGHIQLVQGPADVPNIKVRDPKRVAWLSQTTLSVDETLETVDAIRERFPDLLDPPSDDICYATQNRQLA VKEIARDSDLVIVVGSGNSSNSVRLVEVALEAGARAAHRVDDASEIDEAWLDGVRTVSVTSGASVPEALVQGVLSFLGER GYPDARAVHSAEESLIFALPHELRRDLKAAGRS
Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]
COG id: COG0761
COG function: function code IM; Penicillin tolerance protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispH family [H]
Homologues:
Organism=Escherichia coli, GI1786212, Length=312, Percent_Identity=50.6410256410256, Blast_Score=319, Evalue=1e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003451 [H]
Pfam domain/function: PF02401 LYTB [H]
EC number: =1.17.1.2 [H]
Molecular weight: Translated: 38234; Mature: 38103
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLGHRADGRRALSTGPVRRLGVMTDLATPRTLTEAEKSVLLAAPRGYCAGVDRAVITV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCEEEECCCCCCCCCCHHHHHH EKALDLYGAPVYVRKQIVHNKHVVADLESRGAIFVEELDEVPEGQTVVFSAHGVSPEVHR HHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCEEEHHHHCCCCCCEEEEEECCCCHHHHH QAEERSLKTIDATCPLVTKVHHEAKRFATEDYDILLIGHAGHEEVEGTAGEAPGHIQLVQ HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE GPADVPNIKVRDPKRVAWLSQTTLSVDETLETVDAIRERFPDLLDPPSDDICYATQNRQL CCCCCCCEEECCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCC AVKEIARDSDLVIVVGSGNSSNSVRLVEVALEAGARAAHRVDDASEIDEAWLDGVRTVSV HHHHHCCCCCEEEEEECCCCCCCEEEEEEEHHHCCHHHHHCCCHHHHHHHHHCCCEEEEE TSGASVPEALVQGVLSFLGERGYPDARAVHSAEESLIFALPHELRRDLKAAGRS CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEECCHHHHHHHHHCCCC >Mature Secondary Structure ASLGHRADGRRALSTGPVRRLGVMTDLATPRTLTEAEKSVLLAAPRGYCAGVDRAVITV CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCEEEECCCCCCCCCCHHHHHH EKALDLYGAPVYVRKQIVHNKHVVADLESRGAIFVEELDEVPEGQTVVFSAHGVSPEVHR HHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCEEEHHHHCCCCCCEEEEEECCCCHHHHH QAEERSLKTIDATCPLVTKVHHEAKRFATEDYDILLIGHAGHEEVEGTAGEAPGHIQLVQ HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE GPADVPNIKVRDPKRVAWLSQTTLSVDETLETVDAIRERFPDLLDPPSDDICYATQNRQL CCCCCCCEEECCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCC AVKEIARDSDLVIVVGSGNSSNSVRLVEVALEAGARAAHRVDDASEIDEAWLDGVRTVSV HHHHHCCCCCEEEEEECCCCCCCEEEEEEEHHHCCHHHHHCCCHHHHHHHHHCCCEEEEE TSGASVPEALVQGVLSFLGERGYPDARAVHSAEESLIFALPHELRRDLKAAGRS CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA