| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715298
Identifier: 119715298
GI number: 119715298
Start: 1116992
End: 1117660
Strand: Direct
Name: 119715298
Synonym: Noca_1058
Alternate gene names: NA
Gene position: 1116992-1117660 (Clockwise)
Preceding gene: 119715297
Following gene: 119715302
Centisome position: 22.4
GC content: 74.59
Gene sequence:
>669_bases TTGTCGAAGCACGCGAAGTACGTTCCCAAGCACCGGCACGCCCCGGAACCGACCCTCACCGCCGCGCCGCGCAAGATCCT GCGCAGCACCGTGGTGATGTCCTCGGTCGCCGTGGCGGCCACCGGGGTGGCGGTGTCCGGCGGCGTGCTGAGCTCGCCGG CCGGCATCAGCGTCGCCGCGCAGGACCTCGGCGACAGCGTCACCGGATCGCTCTCGAGCGGCCGGGTCGCCGACCGGGAG CCGGTCGTCTCCCGCGGCTCGGTCTCGCGCACCTCGGCGGACCGCCGCGACGCCGCTGACCCGGCCAAGGAGGCCGCGCT CGCCGTCGACGGCGGCCGCGCGGTCACCCGCTCGGTGGACGTCGCGGACGGCGACCCGCGCGACATCGCCCGGGCCCTGA TGCCGCAGTTCGGGTTCGGTGCCGACCAGTTCGGCTGCCTCGACTCCCTGTGGACGCGGGAGAGCAACTGGAGCCCGAGC GCCCACAACGCCTCCTCCGGCGCACACGGCATCCCGCAGGCCCTGCCCGGCTCGAAGATGGCCTCCGCCGGCCCCGACTG GGCCACCAACCCGGTCACCCAGATCACCTGGGGCCTCGGCTACATCCAGGACCGCTACGGCAGCCCGTGCGGTGCCTGGG GCCACTCCCAGGCCGTCGGCTGGTACTGA
Upstream 100 bases:
>100_bases CGTCCGGCATGGTGGCCCGTGATCTTTTCGTGACCTACCGACCTCGGGAGTCGGTGGTCCGGGGGGTACCACCGACGTCG TCTACCCGAGTAGCGAGCCC
Downstream 100 bases:
>100_bases CCCCGTCAGGGGTGGGTCATCGACTCCACGTCGAGGGCCTCGTCGAGCTGCGCCTCGGTGAGCTCGCCGCGCTCGACGTA GCCCATCGCGATCACGGTCT
Product: secreted protein
Products: NA
Alternate protein names: G5 Domain Protein; G5 Domain-Containing Protein; TraG-Related Protein; Membrane-Bound Transglycosylase; Transglycosylase; Transglycosylase Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; TraG-Like Protein; Phage Tail Tape Mesure Protein; Phage Tail Tape Measure Protein; Immunogenic Secreted Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSKHAKYVPKHRHAPEPTLTAAPRKILRSTVVMSSVAVAATGVAVSGGVLSSPAGISVAAQDLGDSVTGSLSSGRVADRE PVVSRGSVSRTSADRRDAADPAKEAALAVDGGRAVTRSVDVADGDPRDIARALMPQFGFGADQFGCLDSLWTRESNWSPS AHNASSGAHGIPQALPGSKMASAGPDWATNPVTQITWGLGYIQDRYGSPCGAWGHSQAVGWY
Sequences:
>Translated_222_residues MSKHAKYVPKHRHAPEPTLTAAPRKILRSTVVMSSVAVAATGVAVSGGVLSSPAGISVAAQDLGDSVTGSLSSGRVADRE PVVSRGSVSRTSADRRDAADPAKEAALAVDGGRAVTRSVDVADGDPRDIARALMPQFGFGADQFGCLDSLWTRESNWSPS AHNASSGAHGIPQALPGSKMASAGPDWATNPVTQITWGLGYIQDRYGSPCGAWGHSQAVGWY >Mature_221_residues SKHAKYVPKHRHAPEPTLTAAPRKILRSTVVMSSVAVAATGVAVSGGVLSSPAGISVAAQDLGDSVTGSLSSGRVADREP VVSRGSVSRTSADRRDAADPAKEAALAVDGGRAVTRSVDVADGDPRDIARALMPQFGFGADQFGCLDSLWTRESNWSPSA HNASSGAHGIPQALPGSKMASAGPDWATNPVTQITWGLGYIQDRYGSPCGAWGHSQAVGWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22919; Mature: 22787
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHAKYVPKHRHAPEPTLTAAPRKILRSTVVMSSVAVAATGVAVSGGVLSSPAGISVAA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEH QDLGDSVTGSLSSGRVADREPVVSRGSVSRTSADRRDAADPAKEAALAVDGGRAVTRSVD HHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHEEEECCCCEEEEEEC VADGDPRDIARALMPQFGFGADQFGCLDSLWTRESNWSPSAHNASSGAHGIPQALPGSKM CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASAGPDWATNPVTQITWGLGYIQDRYGSPCGAWGHSQAVGWY CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKHAKYVPKHRHAPEPTLTAAPRKILRSTVVMSSVAVAATGVAVSGGVLSSPAGISVAA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEH QDLGDSVTGSLSSGRVADREPVVSRGSVSRTSADRRDAADPAKEAALAVDGGRAVTRSVD HHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHEEEECCCCEEEEEEC VADGDPRDIARALMPQFGFGADQFGCLDSLWTRESNWSPSAHNASSGAHGIPQALPGSKM CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASAGPDWATNPVTQITWGLGYIQDRYGSPCGAWGHSQAVGWY CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA