Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715302

Identifier: 119715302

GI number: 119715302

Start: 1121726

End: 1122346

Strand: Direct

Name: 119715302

Synonym: Noca_1062

Alternate gene names: NA

Gene position: 1121726-1122346 (Clockwise)

Preceding gene: 119715298

Following gene: 119715303

Centisome position: 22.5

GC content: 72.46

Gene sequence:

>621_bases
ATGGAGGGACCTCTCGAGCACGATCCGGCCCGCCTCCGGATCTCGGACGCCGATCGGCACCAGGTGGCCGAGGTGCTGCG
GCAGGCCGCCGGCGAGGGGCGCCTCGAGCTCGACGAGCTCGACGAGCGGCTGGAGGCGACGTACGCCGCCCGCACGTATG
CCGACCTGGTCCCGATCACCCACGACCTCCCTGTCCGTGGGCCCGCCCGCTCGCCCGTCCAGCAGCCCCCGAGCTCGCCG
GCCGTCCGCTACGAGTCGTCGGTCGCGGTGCTGAGCGGGACCTCCCGCAAGGGGGTCTGGGAGGTGGGGCCGACCCACAG
CGTGTTCTGCGTGATGGGCGGCGTGGACCTCGACCTGCGGGAGGCGGTCTTCACCGGCCGGGAGACCGTGATCACCGCGA
ACACTCTGATGGGCGGCGTGGACGTGATCGTCAACGAGCACACGTTGGTGATCGTGGAGGGCATGGGCATCATGGGCGCC
TTCGAGCAGGCGCGGGACCGGGTCGAGCCGCGACTCGACCCGGACTCACCGGTCGTCCGGGTCCGCGGCGTCGCGCTGAT
GGGGGCCGTGACCGTGGTGCGCAAGCCGCTGAGCCGCAAGCAGCTGCGCCGCCGGGACTAA

Upstream 100 bases:

>100_bases
CGGCGTCTCGTCGGGGCCGGTCGGCAGGAGGTCGGAGTAGAGGAACTCGGGATCTTGCGCCACGGACCACGAGGGTAGCC
CTCCGACTACGCTGACCGGC

Downstream 100 bases:

>100_bases
CGGCCCGGCGATCTCCTGACTCAGGTACTCCCCACGGGTACGCGCCTCCCGGTACGGTGACCGTGCTCACCTTTACGACG
GATCGTCCGGCACGTACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEGPLEHDPARLRISDADRHQVAEVLRQAAGEGRLELDELDERLEATYAARTYADLVPITHDLPVRGPARSPVQQPPSSP
AVRYESSVAVLSGTSRKGVWEVGPTHSVFCVMGGVDLDLREAVFTGRETVITANTLMGGVDVIVNEHTLVIVEGMGIMGA
FEQARDRVEPRLDPDSPVVRVRGVALMGAVTVVRKPLSRKQLRRRD

Sequences:

>Translated_206_residues
MEGPLEHDPARLRISDADRHQVAEVLRQAAGEGRLELDELDERLEATYAARTYADLVPITHDLPVRGPARSPVQQPPSSP
AVRYESSVAVLSGTSRKGVWEVGPTHSVFCVMGGVDLDLREAVFTGRETVITANTLMGGVDVIVNEHTLVIVEGMGIMGA
FEQARDRVEPRLDPDSPVVRVRGVALMGAVTVVRKPLSRKQLRRRD
>Mature_206_residues
MEGPLEHDPARLRISDADRHQVAEVLRQAAGEGRLELDELDERLEATYAARTYADLVPITHDLPVRGPARSPVQQPPSSP
AVRYESSVAVLSGTSRKGVWEVGPTHSVFCVMGGVDLDLREAVFTGRETVITANTLMGGVDVIVNEHTLVIVEGMGIMGA
FEQARDRVEPRLDPDSPVVRVRGVALMGAVTVVRKPLSRKQLRRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012551 [H]

Pfam domain/function: PF08044 DUF1707 [H]

EC number: NA

Molecular weight: Translated: 22533; Mature: 22533

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGPLEHDPARLRISDADRHQVAEVLRQAAGEGRLELDELDERLEATYAARTYADLVPIT
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
HDLPVRGPARSPVQQPPSSPAVRYESSVAVLSGTSRKGVWEVGPTHSVFCVMGGVDLDLR
CCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEECCCCCEEEEEECCCCCHHH
EAVFTGRETVITANTLMGGVDVIVNEHTLVIVEGMGIMGAFEQARDRVEPRLDPDSPVVR
HHHHCCCCEEEEHHHHHCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEE
VRGVALMGAVTVVRKPLSRKQLRRRD
EHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MEGPLEHDPARLRISDADRHQVAEVLRQAAGEGRLELDELDERLEATYAARTYADLVPIT
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
HDLPVRGPARSPVQQPPSSPAVRYESSVAVLSGTSRKGVWEVGPTHSVFCVMGGVDLDLR
CCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEECCCCCEEEEEECCCCCHHH
EAVFTGRETVITANTLMGGVDVIVNEHTLVIVEGMGIMGAFEQARDRVEPRLDPDSPVVR
HHHHCCCCEEEEHHHHHCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEE
VRGVALMGAVTVVRKPLSRKQLRRRD
EHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]