| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715286
Identifier: 119715286
GI number: 119715286
Start: 1102354
End: 1103046
Strand: Direct
Name: 119715286
Synonym: Noca_1045
Alternate gene names: NA
Gene position: 1102354-1103046 (Clockwise)
Preceding gene: 119715284
Following gene: 119715287
Centisome position: 22.11
GC content: 63.2
Gene sequence:
>693_bases TTGCCCGCCACCGTCGACAAGGCGGGGGAGTGTGACGCGCTTGAAGTAGGCGCCACGTTCGACGCCGTCTTCGATGACAT CGGCGATGCGGTTGTCGACTCGGTCAAAGAGAAGTTGGAAGCCGGAAAGAACGCGCGGTTCGACGATGGCGTCCCGGGGA ATGGCACGCAGTCGCGCGACTGCGTGCTGCGGGCGATCGCGGGAGCCAAGTCCGTCCACCGTGACCTAACTCCGGTGTGG ACCATGCCCGGCAACGAAGCCAAGGTCGGACACCTCACCGGGGAGTTCCACCGACTCGTCCAGGCCGCACGGATCTCAGT CACGTGTGCCACCTACAACTTCGAGAAGACCTCGCAGATGTGGACCGTACTCAAGGATGCAGCCGAACAGCCCGGCGTCG TGGTGACCGTCTACGTCGACGGCGATAAGGCCGACGCCACCAGAGTCCAGGCCCAGCTCCCGCGAGCGACAATCTACCGA TCTGCGGAACTCCCATCGGGCAAGCGCGTGGTTAGCCATGCCAAGTTCATCGTCATCGACCACGAAGTCCTGCTGCTCAC CAGCGCCAACTTCTCCTTCAGCGCGGAGAGCCGCAACGTCGAGTTCGGCCTGCTCGTCCGCGACGCAGCCCTCGCTGAGT CAGTCGAGTCCACCATGACGAGCAAGCATGGCTCCCTCTACGAGCTTGTTTGA
Upstream 100 bases:
>100_bases GAGGTTCCCGAGGCCTAAGGCGCTCGCGGACAGTGCTAATGACTGCAACCTCCGCGGAATTGGCGACGGGTACGAAGCGT TCGCGAACCGGCCGGACGAG
Downstream 100 bases:
>100_bases GCCTTAGTCTCGGGATGACTTGCCCGTCAGCCGTTGGCGTCCGAGGTCGACGGCGGCGCGAAACTGCACCCGATTAGGGT GGTCCCTCGCTTCTAGCTCA
Product: phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPATVDKAGECDALEVGATFDAVFDDIGDAVVDSVKEKLEAGKNARFDDGVPGNGTQSRDCVLRAIAGAKSVHRDLTPVW TMPGNEAKVGHLTGEFHRLVQAARISVTCATYNFEKTSQMWTVLKDAAEQPGVVVTVYVDGDKADATRVQAQLPRATIYR SAELPSGKRVVSHAKFIVIDHEVLLLTSANFSFSAESRNVEFGLLVRDAALAESVESTMTSKHGSLYELV
Sequences:
>Translated_230_residues MPATVDKAGECDALEVGATFDAVFDDIGDAVVDSVKEKLEAGKNARFDDGVPGNGTQSRDCVLRAIAGAKSVHRDLTPVW TMPGNEAKVGHLTGEFHRLVQAARISVTCATYNFEKTSQMWTVLKDAAEQPGVVVTVYVDGDKADATRVQAQLPRATIYR SAELPSGKRVVSHAKFIVIDHEVLLLTSANFSFSAESRNVEFGLLVRDAALAESVESTMTSKHGSLYELV >Mature_229_residues PATVDKAGECDALEVGATFDAVFDDIGDAVVDSVKEKLEAGKNARFDDGVPGNGTQSRDCVLRAIAGAKSVHRDLTPVWT MPGNEAKVGHLTGEFHRLVQAARISVTCATYNFEKTSQMWTVLKDAAEQPGVVVTVYVDGDKADATRVQAQLPRATIYRS AELPSGKRVVSHAKFIVIDHEVLLLTSANFSFSAESRNVEFGLLVRDAALAESVESTMTSKHGSLYELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24756; Mature: 24625
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATVDKAGECDALEVGATFDAVFDDIGDAVVDSVKEKLEAGKNARFDDGVPGNGTQSRD CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH CVLRAIAGAKSVHRDLTPVWTMPGNEAKVGHLTGEFHRLVQAARISVTCATYNFEKTSQM HHHHHHHHHHHHHHCCCEEEECCCCCCEEECCHHHHHHHHHHHHEEEEEEEECCHHHHHH WTVLKDAAEQPGVVVTVYVDGDKADATRVQAQLPRATIYRSAELPSGKRVVSHAKFIVID HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCHHHEEECCCCCCCCHHHCCEEEEEEE HEVLLLTSANFSFSAESRNVEFGLLVRDAALAESVESTMTSKHGSLYELV CEEEEEEECCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure PATVDKAGECDALEVGATFDAVFDDIGDAVVDSVKEKLEAGKNARFDDGVPGNGTQSRD CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH CVLRAIAGAKSVHRDLTPVWTMPGNEAKVGHLTGEFHRLVQAARISVTCATYNFEKTSQM HHHHHHHHHHHHHHCCCEEEECCCCCCEEECCHHHHHHHHHHHHEEEEEEEECCHHHHHH WTVLKDAAEQPGVVVTVYVDGDKADATRVQAQLPRATIYRSAELPSGKRVVSHAKFIVID HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCHHHEEECCCCCCCCHHHCCEEEEEEE HEVLLLTSANFSFSAESRNVEFGLLVRDAALAESVESTMTSKHGSLYELV CEEEEEEECCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA