| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715278
Identifier: 119715278
GI number: 119715278
Start: 1091016
End: 1093673
Strand: Reverse
Name: 119715278
Synonym: Noca_1037
Alternate gene names: NA
Gene position: 1093673-1091016 (Counterclockwise)
Preceding gene: 119715279
Following gene: 119715277
Centisome position: 21.94
GC content: 61.1
Gene sequence:
>2658_bases ATGACTGGACGACCAAGTATGGCCTCCAGTTTGAGCAAGTGGCGACAAGCATTCGAGAAACTCGATCAGACGCCCTGGCC GGGCACGAATCGAATCGACGATCCGACCCAGTTGCGTGGCCGCAAGCGCGACGTTTCCGATATCGCTGTGGCCTGCCTAG CAAATGACCTCCTTGTCATCCACGGAGCGTCCGGGGTCGGAAAGTCCTCGCTCCTCACAGCTGGGCTCATTCCTGAGTTG AGGCGACGACGGAAGACCGTCGTGTACTGCAATCGCTGGGATGCTCCTGATGACAGCGTGGCTCCGTCTGCGCACATCAC TGAAGGTGTGCTGGAGGCGGACCCGTTCTCACTCCCGAACGGCGAGTTTGAATCTAGATTCGGTGATCGACTGGTGATCG TACTGGACCAGTTCGAAGAAGTGATTCGAAACAATCCCGAGTTCGCGCAACGCGTGCTTCGCTGGATCGAAGACGTAGTC GGCACGACCTCGGCCAGATTCGTCGTTTCGCTTCGGTCTGAGCAGGAGCACGAGCTCGCCGGGCTGTATACCAAGCCGTT CGCGCGTCGCGGACGCGTCGAGATCCCGGCAATTACGAACCCAAGGATCATCGAACTCATCATCGGGGGCCCCCGTGACT CGTCCACGGAGCAGAGCACCGAAGGACGCCGACTTCCGATCGCGGACGACGCGATCGATGCTCTTCGAGAGGCCTGGCAA GCATCACAGGCGGATGAGAACTCAACGAAGTGGGATCGGCCCGGTCTCCTGCACCTCCAAGCCGCTCTCTATGTCCTCTG GATGCGTAGATCTGCAAAGTCCGGCGGCGACGATGGCCTTGGGCACATCGCGCTCACCGATGTCACGGGCCTCATCCGCG AAGTAGCCAAGAGGCATGGTCTCGGCCGCGCGTCTGCACAGGCGGCACTGCTCGCATATGCGCTTGAGCTGAGCGTGTCG TGGAAGGTCGAGAACTGCGAGTCGGCGTGCATGAGCACGCGGACCTGGCAGGGGGTTCCGGCTGCAATCGTCAATCAGAC CAAATGGATCTTCCGCGACATCACCGAGCATCTGTCGAGCGGCGGTTACAAGACTCCGCGAGACATGTGGGAACTCTCGA GAGAGGTCATCGGGCACCTTCACCGGCCTGCGCATGCTGCCGTTCAGCCGGTCGCTCAGAAGCTCTACAACGGACTCGAT CCCGAATGGCTTAGTGCACGCGAGGTCGTGCAGACGGAGGCATCGTCGGGCGAAGGAAATCAGTACGGCCTGCAGCCAGA CTGGCTTGGCGCTGAACGCCCATCCTTCAGCGCCGACATGCGCGACGGCGGACCGTCGCCGCGCCAACTTGGTTCTGGGC CCGCGGCCGGCCTCACAAACACCGATGTGATGTTCGAACTCTTCCGGTGCTATTTCTTCGCGCTCGAATGGCTGAAGCAC GCGAAGATCGCACAGTTAGAAAGCAAGCGCGACAGCAAGATCGTAATTCTGACGCACGATCGCTACTCGGCCGGACTTGC CCGCTGGCACGGAAGCCAGGTCGGCAGCTTCAAGGAAGCCGTGGAACGTCTTGCCTCCCACCGCGGCGAGGATCTGGCAT GGCACGATGTGGGCGGAAAGGTGCGTTCTGCAGCCGCGACCCGACTAGTTGTGAACGCCAACTGGCGCTCGTGCGCCATC CACGACACAGACTTCTCGGGCGTGACTTTCGTGAACTGCGACTTTGCAGGTTCAACATTCGAGAGTTGCGTCTTCGACGG AGCGACATTCGTCAACTGCATCCTCGACCAGGTCGATTTCGTGCGATGCGCCATCAAGGGGCGCCCGACCTGGCCCGAGA AAGCAGTGCTCGACCGGCTTGCCGACGAGGCTGTCGCGAAGGCGCCCGAGTTCAGACTGGCTGCCCCGAGCGAGCTGACT GACGCGCTTCGCGCGCTGCAGGCTCCTAGTTCGACGCGCATAACCTCAACGACTCACTTCCACCTGTATGCAAGGGAGTC TGGCACCCCCGCAGTCACTGCGTCGGGAAGGGCGCCAGCGCCAAAACCCACCAGGGAGCCGACGCTTCCGCTCAAGCCCG GCGGTCTCACTGTCTGCGGCGGCCGGCTAAGTTCGCTCACGTTTCGCACATGCGACTTCCTTGGACCCAACGCGACGGTC AGCCTCCACCACATCGCGGGGACTTCTTTGGAGATTTGCGAACAGCGCGTTGGCACGTTCGACATCTTCGCAGCGGGTAT CCGAGGCCTAACGGTCACCCGCCCCGTGGAGGACCTCGATGAAGCCGCACCTAGTGGCGCCTCCTCCAACCGCGGCGGAC CACGACAGTTCACGCTCAATGTTCATCGTGCCCGGGTAATCAATGCCTGGTTCGGTGTAAACCTCAAGGGCAAGGCCTCA TTCGATGACTGCCTCATTCTCCAACTCGTCAACGCAAGCGAGTCCTTTACGCCAACGCTCTTGCGATCAAGATACTTCGG CTTGGTCAACGCTGAGACTCCCAAGGATTTGCTGGTGGAACCCAAGGGCTCAATCGAGATCGCGGATGCGGGTATCGAGA CTCTGGGTGGTTTGGCGCCTGAGCTGGTGGGCCTGAGCAGAAACATCGACTTCCGGGAGTCAGTGCCCGACCTCGCCGTG GACTCGAAGGAGGAGTGA
Upstream 100 bases:
>100_bases AGGGAGCGAACGCCGCCGCGTCCTTCAAGATCGGCAAGTGCAAGGACGTGCGCTGGCCTGGTTCGCTGCCCGCGCCGTCG GACAGCATGGCGGAGACAGC
Downstream 100 bases:
>100_bases CGTGGACGCCGAGCCGCTCTACGAGGAGGTCGCTGGGCTCGACCTGCAATCGCACACTCCAGAGGGCGGGCGCTCGCTCC TAGCGCTCGCAGATGCCGAG
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 885; Mature: 884
Protein sequence:
>885_residues MTGRPSMASSLSKWRQAFEKLDQTPWPGTNRIDDPTQLRGRKRDVSDIAVACLANDLLVIHGASGVGKSSLLTAGLIPEL RRRRKTVVYCNRWDAPDDSVAPSAHITEGVLEADPFSLPNGEFESRFGDRLVIVLDQFEEVIRNNPEFAQRVLRWIEDVV GTTSARFVVSLRSEQEHELAGLYTKPFARRGRVEIPAITNPRIIELIIGGPRDSSTEQSTEGRRLPIADDAIDALREAWQ ASQADENSTKWDRPGLLHLQAALYVLWMRRSAKSGGDDGLGHIALTDVTGLIREVAKRHGLGRASAQAALLAYALELSVS WKVENCESACMSTRTWQGVPAAIVNQTKWIFRDITEHLSSGGYKTPRDMWELSREVIGHLHRPAHAAVQPVAQKLYNGLD PEWLSAREVVQTEASSGEGNQYGLQPDWLGAERPSFSADMRDGGPSPRQLGSGPAAGLTNTDVMFELFRCYFFALEWLKH AKIAQLESKRDSKIVILTHDRYSAGLARWHGSQVGSFKEAVERLASHRGEDLAWHDVGGKVRSAAATRLVVNANWRSCAI HDTDFSGVTFVNCDFAGSTFESCVFDGATFVNCILDQVDFVRCAIKGRPTWPEKAVLDRLADEAVAKAPEFRLAAPSELT DALRALQAPSSTRITSTTHFHLYARESGTPAVTASGRAPAPKPTREPTLPLKPGGLTVCGGRLSSLTFRTCDFLGPNATV SLHHIAGTSLEICEQRVGTFDIFAAGIRGLTVTRPVEDLDEAAPSGASSNRGGPRQFTLNVHRARVINAWFGVNLKGKAS FDDCLILQLVNASESFTPTLLRSRYFGLVNAETPKDLLVEPKGSIEIADAGIETLGGLAPELVGLSRNIDFRESVPDLAV DSKEE
Sequences:
>Translated_885_residues MTGRPSMASSLSKWRQAFEKLDQTPWPGTNRIDDPTQLRGRKRDVSDIAVACLANDLLVIHGASGVGKSSLLTAGLIPEL RRRRKTVVYCNRWDAPDDSVAPSAHITEGVLEADPFSLPNGEFESRFGDRLVIVLDQFEEVIRNNPEFAQRVLRWIEDVV GTTSARFVVSLRSEQEHELAGLYTKPFARRGRVEIPAITNPRIIELIIGGPRDSSTEQSTEGRRLPIADDAIDALREAWQ ASQADENSTKWDRPGLLHLQAALYVLWMRRSAKSGGDDGLGHIALTDVTGLIREVAKRHGLGRASAQAALLAYALELSVS WKVENCESACMSTRTWQGVPAAIVNQTKWIFRDITEHLSSGGYKTPRDMWELSREVIGHLHRPAHAAVQPVAQKLYNGLD PEWLSAREVVQTEASSGEGNQYGLQPDWLGAERPSFSADMRDGGPSPRQLGSGPAAGLTNTDVMFELFRCYFFALEWLKH AKIAQLESKRDSKIVILTHDRYSAGLARWHGSQVGSFKEAVERLASHRGEDLAWHDVGGKVRSAAATRLVVNANWRSCAI HDTDFSGVTFVNCDFAGSTFESCVFDGATFVNCILDQVDFVRCAIKGRPTWPEKAVLDRLADEAVAKAPEFRLAAPSELT DALRALQAPSSTRITSTTHFHLYARESGTPAVTASGRAPAPKPTREPTLPLKPGGLTVCGGRLSSLTFRTCDFLGPNATV SLHHIAGTSLEICEQRVGTFDIFAAGIRGLTVTRPVEDLDEAAPSGASSNRGGPRQFTLNVHRARVINAWFGVNLKGKAS FDDCLILQLVNASESFTPTLLRSRYFGLVNAETPKDLLVEPKGSIEIADAGIETLGGLAPELVGLSRNIDFRESVPDLAV DSKEE >Mature_884_residues TGRPSMASSLSKWRQAFEKLDQTPWPGTNRIDDPTQLRGRKRDVSDIAVACLANDLLVIHGASGVGKSSLLTAGLIPELR RRRKTVVYCNRWDAPDDSVAPSAHITEGVLEADPFSLPNGEFESRFGDRLVIVLDQFEEVIRNNPEFAQRVLRWIEDVVG TTSARFVVSLRSEQEHELAGLYTKPFARRGRVEIPAITNPRIIELIIGGPRDSSTEQSTEGRRLPIADDAIDALREAWQA SQADENSTKWDRPGLLHLQAALYVLWMRRSAKSGGDDGLGHIALTDVTGLIREVAKRHGLGRASAQAALLAYALELSVSW KVENCESACMSTRTWQGVPAAIVNQTKWIFRDITEHLSSGGYKTPRDMWELSREVIGHLHRPAHAAVQPVAQKLYNGLDP EWLSAREVVQTEASSGEGNQYGLQPDWLGAERPSFSADMRDGGPSPRQLGSGPAAGLTNTDVMFELFRCYFFALEWLKHA KIAQLESKRDSKIVILTHDRYSAGLARWHGSQVGSFKEAVERLASHRGEDLAWHDVGGKVRSAAATRLVVNANWRSCAIH DTDFSGVTFVNCDFAGSTFESCVFDGATFVNCILDQVDFVRCAIKGRPTWPEKAVLDRLADEAVAKAPEFRLAAPSELTD ALRALQAPSSTRITSTTHFHLYARESGTPAVTASGRAPAPKPTREPTLPLKPGGLTVCGGRLSSLTFRTCDFLGPNATVS LHHIAGTSLEICEQRVGTFDIFAAGIRGLTVTRPVEDLDEAAPSGASSNRGGPRQFTLNVHRARVINAWFGVNLKGKASF DDCLILQLVNASESFTPTLLRSRYFGLVNAETPKDLLVEPKGSIEIADAGIETLGGLAPELVGLSRNIDFRESVPDLAVD SKEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96832; Mature: 96701
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRPSMASSLSKWRQAFEKLDQTPWPGTNRIDDPTQLRGRKRDVSDIAVACLANDLLVI CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCEEEE HGASGVGKSSLLTAGLIPELRRRRKTVVYCNRWDAPDDSVAPSAHITEGVLEADPFSLPN ECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCC GEFESRFGDRLVIVLDQFEEVIRNNPEFAQRVLRWIEDVVGTTSARFVVSLRSEQEHELA CCHHHCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH GLYTKPFARRGRVEIPAITNPRIIELIIGGPRDSSTEQSTEGRRLPIADDAIDALREAWQ CCHHCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASQADENSTKWDRPGLLHLQAALYVLWMRRSAKSGGDDGLGHIALTDVTGLIREVAKRHG HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCC LGRASAQAALLAYALELSVSWKVENCESACMSTRTWQGVPAAIVNQTKWIFRDITEHLSS CCCHHHHHHHHHHHHHEEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GGYKTPRDMWELSREVIGHLHRPAHAAVQPVAQKLYNGLDPEWLSAREVVQTEASSGEGN CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC QYGLQPDWLGAERPSFSADMRDGGPSPRQLGSGPAAGLTNTDVMFELFRCYFFALEWLKH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AKIAQLESKRDSKIVILTHDRYSAGLARWHGSQVGSFKEAVERLASHRGEDLAWHDVGGK HHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCH VRSAAATRLVVNANWRSCAIHDTDFSGVTFVNCDFAGSTFESCVFDGATFVNCILDQVDF HHHHHHEEEEEECCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHH VRCAIKGRPTWPEKAVLDRLADEAVAKAPEFRLAAPSELTDALRALQAPSSTRITSTTHF HHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEE HLYARESGTPAVTASGRAPAPKPTREPTLPLKPGGLTVCGGRLSSLTFRTCDFLGPNATV EEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEE SLHHIAGTSLEICEQRVGTFDIFAAGIRGLTVTRPVEDLDEAAPSGASSNRGGPRQFTLN EEEEECCCHHHHHHHHCCCHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCCCCEEEEEE VHRARVINAWFGVNLKGKASFDDCLILQLVNASESFTPTLLRSRYFGLVNAETPKDLLVE EHHHEEEEHHHCCEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCEEECCCCCHHHEEC PKGSIEIADAGIETLGGLAPELVGLSRNIDFRESVPDLAVDSKEE CCCCEEEECCCHHHHHCCCHHHHHCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure TGRPSMASSLSKWRQAFEKLDQTPWPGTNRIDDPTQLRGRKRDVSDIAVACLANDLLVI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCEEEE HGASGVGKSSLLTAGLIPELRRRRKTVVYCNRWDAPDDSVAPSAHITEGVLEADPFSLPN ECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCC GEFESRFGDRLVIVLDQFEEVIRNNPEFAQRVLRWIEDVVGTTSARFVVSLRSEQEHELA CCHHHCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH GLYTKPFARRGRVEIPAITNPRIIELIIGGPRDSSTEQSTEGRRLPIADDAIDALREAWQ CCHHCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASQADENSTKWDRPGLLHLQAALYVLWMRRSAKSGGDDGLGHIALTDVTGLIREVAKRHG HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCC LGRASAQAALLAYALELSVSWKVENCESACMSTRTWQGVPAAIVNQTKWIFRDITEHLSS CCCHHHHHHHHHHHHHEEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GGYKTPRDMWELSREVIGHLHRPAHAAVQPVAQKLYNGLDPEWLSAREVVQTEASSGEGN CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC QYGLQPDWLGAERPSFSADMRDGGPSPRQLGSGPAAGLTNTDVMFELFRCYFFALEWLKH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AKIAQLESKRDSKIVILTHDRYSAGLARWHGSQVGSFKEAVERLASHRGEDLAWHDVGGK HHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCH VRSAAATRLVVNANWRSCAIHDTDFSGVTFVNCDFAGSTFESCVFDGATFVNCILDQVDF HHHHHHEEEEEECCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHH VRCAIKGRPTWPEKAVLDRLADEAVAKAPEFRLAAPSELTDALRALQAPSSTRITSTTHF HHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEE HLYARESGTPAVTASGRAPAPKPTREPTLPLKPGGLTVCGGRLSSLTFRTCDFLGPNATV EEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEE SLHHIAGTSLEICEQRVGTFDIFAAGIRGLTVTRPVEDLDEAAPSGASSNRGGPRQFTLN EEEEECCCHHHHHHHHCCCHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCCCCEEEEEE VHRARVINAWFGVNLKGKASFDDCLILQLVNASESFTPTLLRSRYFGLVNAETPKDLLVE EHHHEEEEHHHCCEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCEEECCCCCHHHEEC PKGSIEIADAGIETLGGLAPELVGLSRNIDFRESVPDLAVDSKEE CCCCEEEECCCHHHHHCCCHHHHHCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA