| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715276
Identifier: 119715276
GI number: 119715276
Start: 1089560
End: 1090240
Strand: Direct
Name: 119715276
Synonym: Noca_1035
Alternate gene names: NA
Gene position: 1089560-1090240 (Clockwise)
Preceding gene: 119715265
Following gene: 119715282
Centisome position: 21.85
GC content: 63.14
Gene sequence:
>681_bases ATGGCCGAGCGCGACTCAGGGGACTATACGAATCCGGTCGTCGAGACGATCCTTGGGCGGCGAACCATCCGGTTCGAGTA TGACCGTTCCCGCGAAGTGCCGAGAACTGTGCTGGAAGTGGTCACGGCGTGCGGGCTCGCCGCTCCCTCATCGAAGAACG CCAAGCCGTGGCGATTCCATGTGGTCCAATATCCCAAATTGCTCGACGAGATCGCCGAGGCTGCCGAGGCTGCCCCTGAC GTCGAGGCGTACGTCCCGCACGACCCGCGTACGGGGTTGCCGCATCCGCACTGGCCATCGAGCGTCGTTGAGTCGGCTGC CATGCTTCGCGAGGTGCCGGCCGCGATCTTCATCGAGAATCGTGGCGTATTCAGTGGCGGACGGAAGACACTGCGCACTG CTCACCCCGACGCGGTTCGTGAGTCGCTCACCAGCTATGCCTTCGAATGTATTGGGATCGGGACGGCGATCGAGAACATG TGGATCGCAGCGATCTCCCTCGGGCTCTCCGCGTTCTTCAGCGGTGACGTGTTGATCGCTGAGGCTGAGATTTCCAGCCG CCTCCACGTCGAGGGCGATATCGTGGGCGTACTTGGGTTGGGCTACTCGACTGCGGCACCATTACCCGCCCGGATGAGCC CAGCGGCGACACAGGTCGATGAGCCGGTCGTCTGGCACTGA
Upstream 100 bases:
>100_bases TGAATGTGGTCACGCCGTTCCTCCTGATCTGCGGTACACATGAGTCTGGCAGGGTGGGGGCGACTCGATCGTACGCACGA GTCTGATCGAAGGGAGCAGC
Downstream 100 bases:
>100_bases GCCGTGTCAAAGAATCTCGTACGGGTGGAGCGCCCGCCCGCCAGCGTCCATGATGTCGGCGTTCCTGAACGCGACTTCCG CGACGTCGTCGCTGCCGGCC
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MAERDSGDYTNPVVETILGRRTIRFEYDRSREVPRTVLEVVTACGLAAPSSKNAKPWRFHVVQYPKLLDEIAEAAEAAPD VEAYVPHDPRTGLPHPHWPSSVVESAAMLREVPAAIFIENRGVFSGGRKTLRTAHPDAVRESLTSYAFECIGIGTAIENM WIAAISLGLSAFFSGDVLIAEAEISSRLHVEGDIVGVLGLGYSTAAPLPARMSPAATQVDEPVVWH
Sequences:
>Translated_226_residues MAERDSGDYTNPVVETILGRRTIRFEYDRSREVPRTVLEVVTACGLAAPSSKNAKPWRFHVVQYPKLLDEIAEAAEAAPD VEAYVPHDPRTGLPHPHWPSSVVESAAMLREVPAAIFIENRGVFSGGRKTLRTAHPDAVRESLTSYAFECIGIGTAIENM WIAAISLGLSAFFSGDVLIAEAEISSRLHVEGDIVGVLGLGYSTAAPLPARMSPAATQVDEPVVWH >Mature_225_residues AERDSGDYTNPVVETILGRRTIRFEYDRSREVPRTVLEVVTACGLAAPSSKNAKPWRFHVVQYPKLLDEIAEAAEAAPDV EAYVPHDPRTGLPHPHWPSSVVESAAMLREVPAAIFIENRGVFSGGRKTLRTAHPDAVRESLTSYAFECIGIGTAIENMW IAAISLGLSAFFSGDVLIAEAEISSRLHVEGDIVGVLGLGYSTAAPLPARMSPAATQVDEPVVWH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24516; Mature: 24385
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERDSGDYTNPVVETILGRRTIRFEYDRSREVPRTVLEVVTACGLAAPSSKNAKPWRFH CCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEE VVQYPKLLDEIAEAAEAAPDVEAYVPHDPRTGLPHPHWPSSVVESAAMLREVPAAIFIEN EEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEC RGVFSGGRKTLRTAHPDAVRESLTSYAFECIGIGTAIENMWIAAISLGLSAFFSGDVLIA CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE EAEISSRLHVEGDIVGVLGLGYSTAAPLPARMSPAATQVDEPVVWH ECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure AERDSGDYTNPVVETILGRRTIRFEYDRSREVPRTVLEVVTACGLAAPSSKNAKPWRFH CCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEE VVQYPKLLDEIAEAAEAAPDVEAYVPHDPRTGLPHPHWPSSVVESAAMLREVPAAIFIEN EEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEC RGVFSGGRKTLRTAHPDAVRESLTSYAFECIGIGTAIENMWIAAISLGLSAFFSGDVLIA CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE EAEISSRLHVEGDIVGVLGLGYSTAAPLPARMSPAATQVDEPVVWH ECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA