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The map label for this gene is tbmB [H]

Identifier: 119715269

GI number: 119715269

Start: 1081693

End: 1082502

Strand: Reverse

Name: tbmB [H]

Synonym: Noca_1028

Alternate gene names: 119715269

Gene position: 1082502-1081693 (Counterclockwise)

Preceding gene: 119715270

Following gene: 119715268

Centisome position: 21.71

GC content: 67.28

Gene sequence:

>810_bases
GTGGCTGAGACCCACTGGTGGACTCCTGGCGAGTCACACCCGGACGCGATCTGGCTGACCGGGGTCCGAGCCGCACTTGA
ATGGTGGGAGGCCCAGGAGGCGTCATACGGCGTCACCAGTAGCATCACCGGACTCGGCGCGATCGCCGCAGCGGAGCAAC
GGATCTCCGAGCTCCACGCGGGCCGCAACACCCTGCTGGCGCCGTCGGCGACGTACGCACTCATCACGGCGTTGCGCGTC
ATTGGGGTGGGCCGTGGCGACGAAGTGATGATCCCGCAGGGTGACTGGCCCGCGACCGAGGCAGTCGTACGCCTCCTCGG
GGCTATGCCAATCTCCGTCCCCATCGACCCCGAGACGCGCACGATCATCCCTGAAGGCTGTGCCTTCTGGTCCAACAATT
CGACCAAGGCCATCGTCGCGCGCCACCACACTGACAACCCGGCGCAAGTTCATGAGATTCGCCTCGCCGCGCCTGGCATC
CCGGTGATCGAAGATTGCGCCACTGCATTGGGCACTTTGCTTCGCGGATCGCCGGTGGGGGCGATCGGTGACTTCGCGGT
GCTCTCCTTCGGTCCCGGGAAGTCGCTTGACGCCGGCGAGGGAGGCGCACTCCTCGTCAACTCGGATGAGGCGTGGGAGC
GGGCGTTGCAGCTCTCGGCACACCCGGCGCGACAGGCCATGGCCGGCGTCGAGAAGGATCTCGTCCAGCCTTCTCAGCGC
CCTCACCCACTGATGGCTGCCCTCGTTGCATATGGCCTTCGCGACGGCCTGCCTTTGCCCGCGGCGCGCCGTGCCCCGGT
GCCAACGTGA

Upstream 100 bases:

>100_bases
CCGCCGATGTACCTCCATCACTACTTCAAGGACTCCGGCCGCCTCGACAGCGAGCGGATCGTCGCGCGGATCGACGAACT
CGACCGGATGGGGGCCTACC

Downstream 100 bases:

>100_bases
TCACTCCCCAGGCGGACCTTGTGGACATCCTCGGCGACGACAGCGACCCACATGTCATCCGCAGGCTCGCCGCAGGGATG
CTCGAGCGCTTGCAACTCAG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: L-glutamine:DOI aminotransferase [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MAETHWWTPGESHPDAIWLTGVRAALEWWEAQEASYGVTSSITGLGAIAAAEQRISELHAGRNTLLAPSATYALITALRV
IGVGRGDEVMIPQGDWPATEAVVRLLGAMPISVPIDPETRTIIPEGCAFWSNNSTKAIVARHHTDNPAQVHEIRLAAPGI
PVIEDCATALGTLLRGSPVGAIGDFAVLSFGPGKSLDAGEGGALLVNSDEAWERALQLSAHPARQAMAGVEKDLVQPSQR
PHPLMAALVAYGLRDGLPLPAARRAPVPT

Sequences:

>Translated_269_residues
MAETHWWTPGESHPDAIWLTGVRAALEWWEAQEASYGVTSSITGLGAIAAAEQRISELHAGRNTLLAPSATYALITALRV
IGVGRGDEVMIPQGDWPATEAVVRLLGAMPISVPIDPETRTIIPEGCAFWSNNSTKAIVARHHTDNPAQVHEIRLAAPGI
PVIEDCATALGTLLRGSPVGAIGDFAVLSFGPGKSLDAGEGGALLVNSDEAWERALQLSAHPARQAMAGVEKDLVQPSQR
PHPLMAALVAYGLRDGLPLPAARRAPVPT
>Mature_268_residues
AETHWWTPGESHPDAIWLTGVRAALEWWEAQEASYGVTSSITGLGAIAAAEQRISELHAGRNTLLAPSATYALITALRVI
GVGRGDEVMIPQGDWPATEAVVRLLGAMPISVPIDPETRTIIPEGCAFWSNNSTKAIVARHHTDNPAQVHEIRLAAPGIP
VIEDCATALGTLLRGSPVGAIGDFAVLSFGPGKSLDAGEGGALLVNSDEAWERALQLSAHPARQAMAGVEKDLVQPSQRP
HPLMAALVAYGLRDGLPLPAARRAPVPT

Specific function: Catalyzes the PLP-dependent transamination of 2-deoxy- scyllo-inosose (DOI) to form 2-deoxy-scyllo-inosamine (DOIA) using L-glutamine as the amino donor. Is also able to catalyze the transamination of scyllo-inosose to form scyllo-inosamine, although this

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. L-glutamine:2- deoxy-scyllo-inosose/scyllo-inosose aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=171, Percent_Identity=35.672514619883, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI2367285, Length=173, Percent_Identity=28.9017341040462, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 28348; Mature: 28216

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETHWWTPGESHPDAIWLTGVRAALEWWEAQEASYGVTSSITGLGAIAAAEQRISELHA
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GRNTLLAPSATYALITALRVIGVGRGDEVMIPQGDWPATEAVVRLLGAMPISVPIDPETR
CCCEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCC
TIIPEGCAFWSNNSTKAIVARHHTDNPAQVHEIRLAAPGIPVIEDCATALGTLLRGSPVG
EECCCCCEEECCCCCEEEEEEECCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
AIGDFAVLSFGPGKSLDAGEGGALLVNSDEAWERALQLSAHPARQAMAGVEKDLVQPSQR
CCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
PHPLMAALVAYGLRDGLPLPAARRAPVPT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AETHWWTPGESHPDAIWLTGVRAALEWWEAQEASYGVTSSITGLGAIAAAEQRISELHA
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GRNTLLAPSATYALITALRVIGVGRGDEVMIPQGDWPATEAVVRLLGAMPISVPIDPETR
CCCEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCC
TIIPEGCAFWSNNSTKAIVARHHTDNPAQVHEIRLAAPGIPVIEDCATALGTLLRGSPVG
EECCCCCEEECCCCCEEEEEEECCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
AIGDFAVLSFGPGKSLDAGEGGALLVNSDEAWERALQLSAHPARQAMAGVEKDLVQPSQR
CCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
PHPLMAALVAYGLRDGLPLPAARRAPVPT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA