| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715268
Identifier: 119715268
GI number: 119715268
Start: 1078861
End: 1081236
Strand: Reverse
Name: 119715268
Synonym: Noca_1027
Alternate gene names: NA
Gene position: 1081236-1078861 (Counterclockwise)
Preceding gene: 119715269
Following gene: 119715267
Centisome position: 21.69
GC content: 65.99
Gene sequence:
>2376_bases ATGAGCGTCGGAACCCGCGCGCCCAGCCTTCGAGTGAGCACTCTGGTGCGTGGCGCTGACGCCTCGCGCCGCCACGCGAC AGCGGTGGGCAAGCTCATCGATCTCGTGTCGGAGTGGGGCCCGACTGCGGGTCTCGACGTGACTATCCGCCGCCCGAAGC CAAGCGGCCCGACGCATGCTGAGATCAGCCCCCAAGGTGACATCCCCGAGCATTGGCAGGCCGACGTGCGCTGGGCACTC GCGAGCATTGCCGACCTCGGGAGGGTACGGAACATCGGCGTTGTCGCAGCCCCGGCCCACCTCCTCGAACTGCGGCTGAG CCGCGATCTTCCAGGTGCCGACCGCTGGTACGACTCCAACGCCCCCGACGCCACTCCTCAGGACACCGTCACAGCGGAGC TCGCTCGCCAACGCCGTATCCGTGTGGTCAGCCCGTGGCCGCAGGCGTACTACGCGCCGCTCGCGGACCTGGTCCAACTC GGCGTGCCCGGCCTCGTTGTCCGTTACCGGTTGCAAGGTGCGTCGGCGATTGAGCACACAATGCTCGACGATGCACTGGA GAACTCGTGGCCTGACGCTCGCGGCCCACGTCAGGACTACCTCGGACAAGCGCTCCGTGTCCGGACGTTAATCGGCGCAA GGGAACCGCTCCCGGCGCGGATGCGTGCAACCCTACGGAGCTGGGCCACGAGTATCACCGCGGTTGAGGTCGATGACGAC CTACGCAGCGAGGCGTGGGCTGGCGAGAGCCTCGCTGGCTTCGCCGTTCCGATCGGTGCTGCGACAGCGATGGTGCGCTT GCCTGTCAGCCATTATGAGCCGTTCCCGGGCCTCGCTACGACGGCGACCGCAGTCCCATCGCGCCCACTCGACCCGCTGC CTCCCAAACCCGACCGTGCCGTTCGAGTGGGCAAGGCAATGGCAGCCAGCGGCTTGTGGATCGACGGCTCGCTCGACCTG AACGACCTCGTTCAGCATGCCTTCATCCAGGGTAGCTCCGGCTCTGGTAAGTCGACCTTGCTCGTGACACTCGCTCTCGC GATCCAGGAGGCGGGCGGCAGCTACACGATTCTCGATCCCGAGGGCAGCACGGTCGAGGCGCTCATCAGCCGCACACCTG TACGACTCTCGGGCACCACCCAGGTCGTTCGTCACGGGATCGCGGGCCTCGACGTACTCGTGAACATTTTCGGCACCACA GTCGACAACGACGTGATGGTCGACCTCTTCGCCGAGATGGTTCAGCACGCGATGGACCCCGAGGGCACGGGAATCGTAGG TCCGCGCTGGCGACGTTGGTTCGCACTCATCGCGAACGGTGTCGCGGAGTACTTCGGTCCTGAGGCCACGTTGGTCACGG TGGCGGCCGTCGCGAGCGACTCCGAGCGTGTTCGGCTGCTCAGCCAGCGGCTGATCGAACGTGGCTCCGAGATCGGTAGG CGACTGCTCTCGGAGTACGGCAGACAGTCCAAAGACTCCGCTGGGGATACGACGAGCTGGGCGGCATCGAAGTTCCAGCC CATCCTCTCCTCGACTGCGACCCGCGCTGTGCTGGGTACTCCGGGTGCCGGCTTGGACGTCCTCAAACTCATGGAATCCG GCCGCTCGCTCGCTGTCGACCTGGGCATGCACCGACTCGGCACATCCGGCGCGCGAATGGTCGGTGCGATGTGGCTACTC AGATACTGGGCGGCCCTGCACGAACGGACGAACCGCGAGTCGCCGCACGTCCTCCTCGTAGATGAGGCACACCTGTTCCA GTACGGCGCCTTGCCACAACTTCTCGCTCAGGCTCGCAAGTTCGGTGTCGGTGTTGTCATCGCCACTCAGCACATCGGAC AGCTCTCCGCCGAGCTCGCCGATGCGCTCGAGTCCAACACGGGCACGTTCATCAGTCTGCGCTCAGGCTTACTCTCCGCT AGCCGAGCAAGCATGCGACTGGAAGGGTGGCCGGTACAGGAGCTCGTGCGACTTCCGAACCTGACTGCTGCCGCGAGCTT CTCCCGCGATGGTGTGGTGACCGACCCGTTCACTCTGCATGTCGATCACTTCGAGCGCCTTCGCGAGCTCCAGAATCGCG GCAAAGTCGGCTCAAGCGTCGCAGCCTCAATACTCTTGAGTTCCGAGCGTGCGAACAGAGCCGCGTCGGAAGGTCCCCCT CCGCTCACCGACACAGACGTCGTCGCACGACTGGGTGCCCAGTCGGAGCACACGTCTTCGGACGACGAGGTCCCGCGCAT TCGGGCCGACGGGCCAACGCAACGCTCATCGGCGCGGGGTGACGGCAGGTTCCTCGACGAGTGGATCGCCAGGCAGAACG CGGACCGCCCTGACCCTGCGGCGGGCGACCGGCGATCAACTGCGGCGCCGAGCTGA
Upstream 100 bases:
>100_bases ACGCCGTGATCTCTGGCCGCGCGAGTCTTGAGAAGTCCGCCGATTGGGAACGCCTGCTGATCTGGTTCACTTCCTCAGTC AGTCCGGCGGTGGTCGCCGT
Downstream 100 bases:
>100_bases TGCGTCGTCAGCGAACTCCGCGATCCCAACCGCGCCACCGCAGTTCGGGATCGGTTCCATTACCGAGAGGGGGTGATGGT TATGGCGGGCAACAAGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase
Number of amino acids: Translated: 791; Mature: 790
Protein sequence:
>791_residues MSVGTRAPSLRVSTLVRGADASRRHATAVGKLIDLVSEWGPTAGLDVTIRRPKPSGPTHAEISPQGDIPEHWQADVRWAL ASIADLGRVRNIGVVAAPAHLLELRLSRDLPGADRWYDSNAPDATPQDTVTAELARQRRIRVVSPWPQAYYAPLADLVQL GVPGLVVRYRLQGASAIEHTMLDDALENSWPDARGPRQDYLGQALRVRTLIGAREPLPARMRATLRSWATSITAVEVDDD LRSEAWAGESLAGFAVPIGAATAMVRLPVSHYEPFPGLATTATAVPSRPLDPLPPKPDRAVRVGKAMAASGLWIDGSLDL NDLVQHAFIQGSSGSGKSTLLVTLALAIQEAGGSYTILDPEGSTVEALISRTPVRLSGTTQVVRHGIAGLDVLVNIFGTT VDNDVMVDLFAEMVQHAMDPEGTGIVGPRWRRWFALIANGVAEYFGPEATLVTVAAVASDSERVRLLSQRLIERGSEIGR RLLSEYGRQSKDSAGDTTSWAASKFQPILSSTATRAVLGTPGAGLDVLKLMESGRSLAVDLGMHRLGTSGARMVGAMWLL RYWAALHERTNRESPHVLLVDEAHLFQYGALPQLLAQARKFGVGVVIATQHIGQLSAELADALESNTGTFISLRSGLLSA SRASMRLEGWPVQELVRLPNLTAAASFSRDGVVTDPFTLHVDHFERLRELQNRGKVGSSVAASILLSSERANRAASEGPP PLTDTDVVARLGAQSEHTSSDDEVPRIRADGPTQRSSARGDGRFLDEWIARQNADRPDPAAGDRRSTAAPS
Sequences:
>Translated_791_residues MSVGTRAPSLRVSTLVRGADASRRHATAVGKLIDLVSEWGPTAGLDVTIRRPKPSGPTHAEISPQGDIPEHWQADVRWAL ASIADLGRVRNIGVVAAPAHLLELRLSRDLPGADRWYDSNAPDATPQDTVTAELARQRRIRVVSPWPQAYYAPLADLVQL GVPGLVVRYRLQGASAIEHTMLDDALENSWPDARGPRQDYLGQALRVRTLIGAREPLPARMRATLRSWATSITAVEVDDD LRSEAWAGESLAGFAVPIGAATAMVRLPVSHYEPFPGLATTATAVPSRPLDPLPPKPDRAVRVGKAMAASGLWIDGSLDL NDLVQHAFIQGSSGSGKSTLLVTLALAIQEAGGSYTILDPEGSTVEALISRTPVRLSGTTQVVRHGIAGLDVLVNIFGTT VDNDVMVDLFAEMVQHAMDPEGTGIVGPRWRRWFALIANGVAEYFGPEATLVTVAAVASDSERVRLLSQRLIERGSEIGR RLLSEYGRQSKDSAGDTTSWAASKFQPILSSTATRAVLGTPGAGLDVLKLMESGRSLAVDLGMHRLGTSGARMVGAMWLL RYWAALHERTNRESPHVLLVDEAHLFQYGALPQLLAQARKFGVGVVIATQHIGQLSAELADALESNTGTFISLRSGLLSA SRASMRLEGWPVQELVRLPNLTAAASFSRDGVVTDPFTLHVDHFERLRELQNRGKVGSSVAASILLSSERANRAASEGPP PLTDTDVVARLGAQSEHTSSDDEVPRIRADGPTQRSSARGDGRFLDEWIARQNADRPDPAAGDRRSTAAPS >Mature_790_residues SVGTRAPSLRVSTLVRGADASRRHATAVGKLIDLVSEWGPTAGLDVTIRRPKPSGPTHAEISPQGDIPEHWQADVRWALA SIADLGRVRNIGVVAAPAHLLELRLSRDLPGADRWYDSNAPDATPQDTVTAELARQRRIRVVSPWPQAYYAPLADLVQLG VPGLVVRYRLQGASAIEHTMLDDALENSWPDARGPRQDYLGQALRVRTLIGAREPLPARMRATLRSWATSITAVEVDDDL RSEAWAGESLAGFAVPIGAATAMVRLPVSHYEPFPGLATTATAVPSRPLDPLPPKPDRAVRVGKAMAASGLWIDGSLDLN DLVQHAFIQGSSGSGKSTLLVTLALAIQEAGGSYTILDPEGSTVEALISRTPVRLSGTTQVVRHGIAGLDVLVNIFGTTV DNDVMVDLFAEMVQHAMDPEGTGIVGPRWRRWFALIANGVAEYFGPEATLVTVAAVASDSERVRLLSQRLIERGSEIGRR LLSEYGRQSKDSAGDTTSWAASKFQPILSSTATRAVLGTPGAGLDVLKLMESGRSLAVDLGMHRLGTSGARMVGAMWLLR YWAALHERTNRESPHVLLVDEAHLFQYGALPQLLAQARKFGVGVVIATQHIGQLSAELADALESNTGTFISLRSGLLSAS RASMRLEGWPVQELVRLPNLTAAASFSRDGVVTDPFTLHVDHFERLRELQNRGKVGSSVAASILLSSERANRAASEGPPP LTDTDVVARLGAQSEHTSSDDEVPRIRADGPTQRSSARGDGRFLDEWIARQNADRPDPAAGDRRSTAAPS
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84929; Mature: 84798
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGTRAPSLRVSTLVRGADASRRHATAVGKLIDLVSEWGPTAGLDVTIRRPKPSGPTHA CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC EISPQGDIPEHWQADVRWALASIADLGRVRNIGVVAAPAHLLELRLSRDLPGADRWYDSN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCCCCC APDATPQDTVTAELARQRRIRVVSPWPQAYYAPLADLVQLGVPGLVVRYRLQGASAIEHT CCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH MLDDALENSWPDARGPRQDYLGQALRVRTLIGAREPLPARMRATLRSWATSITAVEVDDD HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCH LRSEAWAGESLAGFAVPIGAATAMVRLPVSHYEPFPGLATTATAVPSRPLDPLPPKPDRA HHHHHCCCCCCCCCEEHHHHHHHHEECCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCHH VRVGKAMAASGLWIDGSLDLNDLVQHAFIQGSSGSGKSTLLVTLALAIQEAGGSYTILDP HHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC EGSTVEALISRTPVRLSGTTQVVRHGIAGLDVLVNIFGTTVDNDVMVDLFAEMVQHAMDP CCCHHHHHHHCCCEEECCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC EGTGIVGPRWRRWFALIANGVAEYFGPEATLVTVAAVASDSERVRLLSQRLIERGSEIGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCHHHHHHHHHHHHHHHHHHHH RLLSEYGRQSKDSAGDTTSWAASKFQPILSSTATRAVLGTPGAGLDVLKLMESGRSLAVD HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEE LGMHRLGTSGARMVGAMWLLRYWAALHERTNRESPHVLLVDEAHLFQYGALPQLLAQARK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCHHHHHHHHHH FGVGVVIATQHIGQLSAELADALESNTGTFISLRSGLLSASRASMRLEGWPVQELVRLPN CCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHEEECCCCHHHHHHCCC LTAAASFSRDGVVTDPFTLHVDHFERLRELQNRGKVGSSVAASILLSSERANRAASEGPP CHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC PLTDTDVVARLGAQSEHTSSDDEVPRIRADGPTQRSSARGDGRFLDEWIARQNADRPDPA CCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC AGDRRSTAAPS CCCCCCCCCCC >Mature Secondary Structure SVGTRAPSLRVSTLVRGADASRRHATAVGKLIDLVSEWGPTAGLDVTIRRPKPSGPTHA CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC EISPQGDIPEHWQADVRWALASIADLGRVRNIGVVAAPAHLLELRLSRDLPGADRWYDSN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCCCCC APDATPQDTVTAELARQRRIRVVSPWPQAYYAPLADLVQLGVPGLVVRYRLQGASAIEHT CCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH MLDDALENSWPDARGPRQDYLGQALRVRTLIGAREPLPARMRATLRSWATSITAVEVDDD HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCH LRSEAWAGESLAGFAVPIGAATAMVRLPVSHYEPFPGLATTATAVPSRPLDPLPPKPDRA HHHHHCCCCCCCCCEEHHHHHHHHEECCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCHH VRVGKAMAASGLWIDGSLDLNDLVQHAFIQGSSGSGKSTLLVTLALAIQEAGGSYTILDP HHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC EGSTVEALISRTPVRLSGTTQVVRHGIAGLDVLVNIFGTTVDNDVMVDLFAEMVQHAMDP CCCHHHHHHHCCCEEECCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC EGTGIVGPRWRRWFALIANGVAEYFGPEATLVTVAAVASDSERVRLLSQRLIERGSEIGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCHHHHHHHHHHHHHHHHHHHH RLLSEYGRQSKDSAGDTTSWAASKFQPILSSTATRAVLGTPGAGLDVLKLMESGRSLAVD HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEE LGMHRLGTSGARMVGAMWLLRYWAALHERTNRESPHVLLVDEAHLFQYGALPQLLAQARK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCHHHHHHHHHH FGVGVVIATQHIGQLSAELADALESNTGTFISLRSGLLSASRASMRLEGWPVQELVRLPN CCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHEEECCCCHHHHHHCCC LTAAASFSRDGVVTDPFTLHVDHFERLRELQNRGKVGSSVAASILLSSERANRAASEGPP CHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC PLTDTDVVARLGAQSEHTSSDDEVPRIRADGPTQRSSARGDGRFLDEWIARQNADRPDPA CCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC AGDRRSTAAPS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA