| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715263
Identifier: 119715263
GI number: 119715263
Start: 1073472
End: 1074269
Strand: Direct
Name: 119715263
Synonym: Noca_1022
Alternate gene names: NA
Gene position: 1073472-1074269 (Clockwise)
Preceding gene: 119715262
Following gene: 119715264
Centisome position: 21.53
GC content: 68.55
Gene sequence:
>798_bases ATGACCACCACCGCCCTCGACGCCGCTCTGGAGCAGCACACTCCCGTCCATCGGGTGCCGCTGTCCCGCGTGACCCGCGT CGAGCTCCGCAAGATGTTCGACACCCGCTCGGGCTACTGGCTGATGGCGAGCATCGTCATCGCGGCTCTCGGCTCGACGG TGGCGATCATCCTGTTCGCCCCCGACGAGGACCTGACCTACTACACGTTCGCGCAGGCCATCGGCTTCCCGATGACGGTG ATCCTGCCGATCATCGCGGTCTTGTCGATCACCGGTGAGTGGAGCCAGCGCACCGGCCTGACCACGTTCACACTGGTGCC GCACCGCCACCGGATCGTCCTGGCCAAGGTCGCCGCGTCGGTCGCCGTCGGCATCTCGTCGATGCTGTTCGCCCTGGCCG TCGGGATCGCCGGCAACATCGTCGGGACCACCGTCGCCGGCACCGACCAGGTCTGGGACGTGTCCCTCGCCCACGGCGTG GAGATCATGGTCGGCAGCCTGCTGTGCCTGCTGACCGGGACCATGCTCGGCATCCTCTTCCGGAGCTCGCCGGTCGCCCT GGTGATGTACTTCGTCTCCTCGCTCCTCGTCCCCACCGTGTCCGGCATGCTGGCCACCACGCAGGGTTGGTACCAGGACC TGCAGCCCTGGGTGGACCTCAACCTGGCGCAGGGCACCCTCTTCGACGGGACCATCGCCGGCGACCAGTGGGCCCACCTC GCGGCCGCTGCGGCCGTCTGGTTGATCCTGCCGGGGCTCCTCGGGCTGCGCCTCGTGATGCGAGCCGAGGTCAAGTAG
Upstream 100 bases:
>100_bases ACGCCGGCCTCGCCCTCACCGAGCTGCGCACCGCCGACGGCGGCCTCGAGGAGCTCTTCCTCCAGCTCACCGCCGACACC CAACGAGAAGGGAACGCAGC
Downstream 100 bases:
>100_bases CGGTCGAGCGCCCGGGGAGGACTGCGGATCTGTCCGTGTCCTCCCCGGGTCTTGGCGTCCGGCCGAGGCACGTCCTCGCC TGGGCGCCTCTCCTCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTTTALDAALEQHTPVHRVPLSRVTRVELRKMFDTRSGYWLMASIVIAALGSTVAIILFAPDEDLTYYTFAQAIGFPMTV ILPIIAVLSITGEWSQRTGLTTFTLVPHRHRIVLAKVAASVAVGISSMLFALAVGIAGNIVGTTVAGTDQVWDVSLAHGV EIMVGSLLCLLTGTMLGILFRSSPVALVMYFVSSLLVPTVSGMLATTQGWYQDLQPWVDLNLAQGTLFDGTIAGDQWAHL AAAAAVWLILPGLLGLRLVMRAEVK
Sequences:
>Translated_265_residues MTTTALDAALEQHTPVHRVPLSRVTRVELRKMFDTRSGYWLMASIVIAALGSTVAIILFAPDEDLTYYTFAQAIGFPMTV ILPIIAVLSITGEWSQRTGLTTFTLVPHRHRIVLAKVAASVAVGISSMLFALAVGIAGNIVGTTVAGTDQVWDVSLAHGV EIMVGSLLCLLTGTMLGILFRSSPVALVMYFVSSLLVPTVSGMLATTQGWYQDLQPWVDLNLAQGTLFDGTIAGDQWAHL AAAAAVWLILPGLLGLRLVMRAEVK >Mature_264_residues TTTALDAALEQHTPVHRVPLSRVTRVELRKMFDTRSGYWLMASIVIAALGSTVAIILFAPDEDLTYYTFAQAIGFPMTVI LPIIAVLSITGEWSQRTGLTTFTLVPHRHRIVLAKVAASVAVGISSMLFALAVGIAGNIVGTTVAGTDQVWDVSLAHGVE IMVGSLLCLLTGTMLGILFRSSPVALVMYFVSSLLVPTVSGMLATTQGWYQDLQPWVDLNLAQGTLFDGTIAGDQWAHLA AAAAVWLILPGLLGLRLVMRAEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28389; Mature: 28258
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTALDAALEQHTPVHRVPLSRVTRVELRKMFDTRSGYWLMASIVIAALGSTVAIILFA CCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEC PDEDLTYYTFAQAIGFPMTVILPIIAVLSITGEWSQRTGLTTFTLVPHRHRIVLAKVAAS CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCHHHHHHHHHHH VAVGISSMLFALAVGIAGNIVGTTVAGTDQVWDVSLAHGVEIMVGSLLCLLTGTMLGILF HHHHHHHHHHHHHHHHCCCHHCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH RSSPVALVMYFVSSLLVPTVSGMLATTQGWYQDLQPWVDLNLAQGTLFDGTIAGDQWAHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEECCCCEECCCCCCCHHHHH AAAAAVWLILPGLLGLRLVMRAEVK HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTTALDAALEQHTPVHRVPLSRVTRVELRKMFDTRSGYWLMASIVIAALGSTVAIILFA CCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEC PDEDLTYYTFAQAIGFPMTVILPIIAVLSITGEWSQRTGLTTFTLVPHRHRIVLAKVAAS CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCHHHHHHHHHHH VAVGISSMLFALAVGIAGNIVGTTVAGTDQVWDVSLAHGVEIMVGSLLCLLTGTMLGILF HHHHHHHHHHHHHHHHCCCHHCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH RSSPVALVMYFVSSLLVPTVSGMLATTQGWYQDLQPWVDLNLAQGTLFDGTIAGDQWAHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEECCCCEECCCCCCCHHHHH AAAAAVWLILPGLLGLRLVMRAEVK HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA