Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is yyaL [H]

Identifier: 119715264

GI number: 119715264

Start: 1074398

End: 1074589

Strand: Direct

Name: yyaL [H]

Synonym: Noca_1023

Alternate gene names: 119715264

Gene position: 1074398-1074589 (Clockwise)

Preceding gene: 119715263

Following gene: 119715265

Centisome position: 21.55

GC content: 70.83

Gene sequence:

>192_bases
GTGCCCAACCGACTGGCGTCCGCGACGTCGCCGTACCTGCTCCAGCACGCCGACAACCCCGTCGACTGGTGGGAGTGGGG
GCCCGAGGCGTTCGCGGAGGCCCGGCGACGGAACGTGCCGGTGCTGCTCAGCGTCGGGTACGCCGCGTGCCACTGGTGCC
AGGTGAGTGAGCTAGCGCTCATGAAGCGCTGA

Upstream 100 bases:

>100_bases
TCTGTCCGTGTCCTCCCCGGGTCTTGGCGTCCGGCCGAGGCACGTCCTCGCCTGGGCGCCTCTCCTCACCGTGCCTCGGC
CGCACGGCTAGCGTGGCCAG

Downstream 100 bases:

>100_bases
CCGACCCAAACCTGCAGGTCAGCAACGCGGCGCCTTCGTTCCTTGGCGCACCGTGGTGCGCGAAGATTCGGCACGGCTTG
CGCGTTGCAGTCCGCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MPNRLASATSPYLLQHADNPVDWWEWGPEAFAEARRRNVPVLLSVGYAACHWCQVSELALMKR

Sequences:

>Translated_63_residues
MPNRLASATSPYLLQHADNPVDWWEWGPEAFAEARRRNVPVLLSVGYAACHWCQVSELALMKR
>Mature_62_residues
PNRLASATSPYLLQHADNPVDWWEWGPEAFAEARRRNVPVLLSVGYAACHWCQVSELALMKR

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=57, Percent_Identity=63.1578947368421, Blast_Score=87, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25147430, Length=55, Percent_Identity=61.8181818181818, Blast_Score=90, Evalue=3e-19,
Organism=Drosophila melanogaster, GI20129985, Length=55, Percent_Identity=63.6363636363636, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 7210; Mature: 7079

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNRLASATSPYLLQHADNPVDWWEWGPEAFAEARRRNVPVLLSVGYAACHWCQVSELAL
CCCCCCCCCCCEEECCCCCCCCHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
MKR
HCC
>Mature Secondary Structure 
PNRLASATSPYLLQHADNPVDWWEWGPEAFAEARRRNVPVLLSVGYAACHWCQVSELAL
CCCCCCCCCCEEECCCCCCCCHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
MKR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]