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The map label for this gene is cysS [H]

Identifier: 119715257

GI number: 119715257

Start: 1067855

End: 1069027

Strand: Direct

Name: cysS [H]

Synonym: Noca_1016

Alternate gene names: 119715257

Gene position: 1067855-1069027 (Clockwise)

Preceding gene: 119715256

Following gene: 119715258

Centisome position: 21.42

GC content: 76.13

Gene sequence:

>1173_bases
ATGCCGGCCCACCACCTGCGCCACCTGACGTCCCCGGTCTTCGACGCCGCCCAGCGGGTCGGCGCCGCCCCGCAGACCCC
GCGGCACGTCACGTTGGCCGGCGGCGACCTGCGGCTGGTCGGGTCGGCGCGGGTCTACGTCTGTGGGATCACGCCGTACG
ACGTCACCCACCTGGGCCACGCCTCGACGTTCGTGTGGGCGGACCTGCTCGCGTCGGTCCTGGACGGCACCGGGGTGGAC
GTCAGCACCTGTCGCAACGTGACCGACGTCGACGACGTGCTGCTCGAGGCGGCCCGGCTGCGGGGCAGCCACTTCGACGA
GCTGGCGGTCACCCAGGAGGCCGACTTCGACCGGTCGATGCGCGAGCTCCGGGTGGCCACGCCGGCGCACCAGCCGCGCG
CCCGGCACTACGTCGACGCGGTCGTCCAGCTGGCGCAGGCACTCCTCGACGCGGGCGCGGCGTACGAGCGCGACGGGACC
GTGTGGTTCCGCGGCCGCGACGTCGTGGCGCGCACGGGCCTGGAGCGCGACCGGGCGCTCGCGCTCGCCGAGGCGTACGG
CGACCAGCCGGGCGAACCGGCCAAGGACGACTCGTTCGACGTGGCCGTGTGGCGGCCCTCCGCGGACCAGCAGCCGGCCT
GGGCGAGCCCGTGGGGCTGGGGCCGGCCGGGCTGGCACGCCGAGTGTGCCGCGATGGCGCTGGCCGTGCACGGCCCCAGC
GTCGACGTGCTCGTGGGCGGGGACGACCTGGTCTTCCCGCACCACGCCTACCAGGTCGCGATGGCCGAGGCGGTCAGCGG
CGTCGCGCCGTTCGCGCGCGCCCAGCTGCACGTGGGCGAGGTCCGCATCGGGGGCCAGAAGATGGCGAAGTCCTCGGGCA
ACCTGGTGCTGGTCGACGACCTCCTCGAGCACCTCCCGCCCGCGGCACTGCGGCTGCACCTGCTGCACCGCCGCTACGCC
GAGCCCTGGGACTTCGAGGCCGCGCAGCTGGCCGAGGCCGAGCAGCTGCTGGAGTCGCTCTACGCCGCGGCCGGCCGGGC
CGGCGCCGGCGACCCGACCGCGCCCCTCGAGGCGCTGCGCACCGACCTCGACGTCCCCACCGCCGTCGCCACCGCCCTCG
ACCAGGGCGGGGAGTCCGCGCGCCGCCTGATCACCCAGCTCCGCCTCGGCTGA

Upstream 100 bases:

>100_bases
GACGAGCTGGCCGACCGTCTCGACCTGACGCTGCTCCCGCCGCAGGGCTGACGCTGGTACGGCACCCGGCGGGCTGCCGC
CCGGGTGCCAGACTGGCCCC

Downstream 100 bases:

>100_bases
CGATAGTCCCTGACGTTTGTGTGGTCTGGGAGCGCGCCCACACCGCGCAAACGTCAGGGACTATCGTCAGCGGAGGCCAG
TGTGGCAACGGCCAGGGAGA

Product: cysteine--tRNA ligase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MPAHHLRHLTSPVFDAAQRVGAAPQTPRHVTLAGGDLRLVGSARVYVCGITPYDVTHLGHASTFVWADLLASVLDGTGVD
VSTCRNVTDVDDVLLEAARLRGSHFDELAVTQEADFDRSMRELRVATPAHQPRARHYVDAVVQLAQALLDAGAAYERDGT
VWFRGRDVVARTGLERDRALALAEAYGDQPGEPAKDDSFDVAVWRPSADQQPAWASPWGWGRPGWHAECAAMALAVHGPS
VDVLVGGDDLVFPHHAYQVAMAEAVSGVAPFARAQLHVGEVRIGGQKMAKSSGNLVLVDDLLEHLPPAALRLHLLHRRYA
EPWDFEAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALRTDLDVPTAVATALDQGGESARRLITQLRLG

Sequences:

>Translated_390_residues
MPAHHLRHLTSPVFDAAQRVGAAPQTPRHVTLAGGDLRLVGSARVYVCGITPYDVTHLGHASTFVWADLLASVLDGTGVD
VSTCRNVTDVDDVLLEAARLRGSHFDELAVTQEADFDRSMRELRVATPAHQPRARHYVDAVVQLAQALLDAGAAYERDGT
VWFRGRDVVARTGLERDRALALAEAYGDQPGEPAKDDSFDVAVWRPSADQQPAWASPWGWGRPGWHAECAAMALAVHGPS
VDVLVGGDDLVFPHHAYQVAMAEAVSGVAPFARAQLHVGEVRIGGQKMAKSSGNLVLVDDLLEHLPPAALRLHLLHRRYA
EPWDFEAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALRTDLDVPTAVATALDQGGESARRLITQLRLG
>Mature_389_residues
PAHHLRHLTSPVFDAAQRVGAAPQTPRHVTLAGGDLRLVGSARVYVCGITPYDVTHLGHASTFVWADLLASVLDGTGVDV
STCRNVTDVDDVLLEAARLRGSHFDELAVTQEADFDRSMRELRVATPAHQPRARHYVDAVVQLAQALLDAGAAYERDGTV
WFRGRDVVARTGLERDRALALAEAYGDQPGEPAKDDSFDVAVWRPSADQQPAWASPWGWGRPGWHAECAAMALAVHGPSV
DVLVGGDDLVFPHHAYQVAMAEAVSGVAPFARAQLHVGEVRIGGQKMAKSSGNLVLVDDLLEHLPPAALRLHLLHRRYAE
PWDFEAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALRTDLDVPTAVATALDQGGESARRLITQLRLG

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=287, Percent_Identity=33.1010452961672, Blast_Score=158, Evalue=7e-39,
Organism=Homo sapiens, GI21269877, Length=292, Percent_Identity=32.8767123287671, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI10835051, Length=292, Percent_Identity=32.8767123287671, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI303304987, Length=292, Percent_Identity=32.8767123287671, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI62240992, Length=292, Percent_Identity=32.8767123287671, Blast_Score=140, Evalue=3e-33,
Organism=Escherichia coli, GI1786737, Length=357, Percent_Identity=31.9327731092437, Blast_Score=192, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17509795, Length=254, Percent_Identity=33.4645669291339, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI17509797, Length=254, Percent_Identity=33.4645669291339, Blast_Score=134, Evalue=7e-32,
Organism=Saccharomyces cerevisiae, GI6324082, Length=247, Percent_Identity=30.7692307692308, Blast_Score=136, Evalue=7e-33,
Organism=Drosophila melanogaster, GI19922218, Length=368, Percent_Identity=31.25, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI19922364, Length=257, Percent_Identity=33.852140077821, Blast_Score=142, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 41885; Mature: 41754

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAHHLRHLTSPVFDAAQRVGAAPQTPRHVTLAGGDLRLVGSARVYVCGITPYDVTHLGH
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCHHHCCC
ASTFVWADLLASVLDGTGVDVSTCRNVTDVDDVLLEAARLRGSHFDELAVTQEADFDRSM
HHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH
RELRVATPAHQPRARHYVDAVVQLAQALLDAGAAYERDGTVWFRGRDVVARTGLERDRAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCHHHHH
ALAEAYGDQPGEPAKDDSFDVAVWRPSADQQPAWASPWGWGRPGWHAECAAMALAVHGPS
HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCC
VDVLVGGDDLVFPHHAYQVAMAEAVSGVAPFARAQLHVGEVRIGGQKMAKSSGNLVLVDD
EEEEECCCCEECCHHHHHHHHHHHHHHHCHHHHHHEEECEEEECHHHHHCCCCCEEEHHH
LLEHLPPAALRLHLLHRRYAEPWDFEAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALR
HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TDLDVPTAVATALDQGGESARRLITQLRLG
HCCCCHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PAHHLRHLTSPVFDAAQRVGAAPQTPRHVTLAGGDLRLVGSARVYVCGITPYDVTHLGH
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCHHHCCC
ASTFVWADLLASVLDGTGVDVSTCRNVTDVDDVLLEAARLRGSHFDELAVTQEADFDRSM
HHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH
RELRVATPAHQPRARHYVDAVVQLAQALLDAGAAYERDGTVWFRGRDVVARTGLERDRAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCHHHHH
ALAEAYGDQPGEPAKDDSFDVAVWRPSADQQPAWASPWGWGRPGWHAECAAMALAVHGPS
HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCC
VDVLVGGDDLVFPHHAYQVAMAEAVSGVAPFARAQLHVGEVRIGGQKMAKSSGNLVLVDD
EEEEECCCCEECCHHHHHHHHHHHHHHHCHHHHHHEEECEEEECHHHHHCCCCCEEEHHH
LLEHLPPAALRLHLLHRRYAEPWDFEAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALR
HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TDLDVPTAVATALDQGGESARRLITQLRLG
HCCCCHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA