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The map label for this gene is pcaJ [H]

Identifier: 119715256

GI number: 119715256

Start: 1067155

End: 1067805

Strand: Direct

Name: pcaJ [H]

Synonym: Noca_1015

Alternate gene names: 119715256

Gene position: 1067155-1067805 (Clockwise)

Preceding gene: 119715255

Following gene: 119715257

Centisome position: 21.4

GC content: 70.51

Gene sequence:

>651_bases
GTGAGCGGCGGGCAGGCACTGACCCGGGACGACATGGCGGCGCTGGTCGCGCGCGACATCCCGCCCGGCTCTTACGTCAA
TCTCGGCATCGGCCTGCCCACGCTGGTCGCCGACCACCTGGCACCCGATTCGGGCGTGGTCCTCCACACGGAGAACGGGA
TGCTCAACATGGGCCCGGCGGCGACCGGCGACGAGGTCGACCTCGACCTCACCAACGCCGGCAAGGTCCCGGTCACCGAG
CTGGCCGGGGCGTCGTACTTCCACCAGGCCGACTCGTTCGCGATGATGCGCGGCGGGCACCTCGACGTGTGCGTGCTCGG
TGCCTTCCAGGTCTCCGCGGCCGGCGACCTCGCCAACTGGCACACCGGCGCTCCGGACGCGATCCCTGCGGTCGGTGGCG
CGATGGACCTGGCGACCGGCGCCAGGAGCGTGTTCGTGATGATGACGCTGTTCGCGAAGGACGGCTCGCCGAAGCTGGTT
CCGCAGTGCACCTACCCGCTGACCGGCGTCGGCTGCGTCAACCGGGTCTACACCGACGTCGCCACCTTCGAGATCACGCC
CGACGGCGTCCGGGTGTGCGAGACGTTCGAGACCTCGTACGACGAGCTGGCCGACCGTCTCGACCTGACGCTGCTCCCGC
CGCAGGGCTGA

Upstream 100 bases:

>100_bases
GCAGCACGGTGGTCCAGGTGCGCGAGGTCGTCGAGCCCGGCGCGCTCGACCCTGAGGCGATCGTCACGCCGAGCATCTAC
GTCGACAAGGTGGTGGCGGT

Downstream 100 bases:

>100_bases
CGCTGGTACGGCACCCGGCGGGCTGCCGCCCGGGTGCCAGACTGGCCCCATGCCGGCCCACCACCTGCGCCACCTGACGT
CCCCGGTCTTCGACGCCGCC

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: Beta-ketoadipate:succinyl-CoA transferase subunit B [H]

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSGGQALTRDDMAALVARDIPPGSYVNLGIGLPTLVADHLAPDSGVVLHTENGMLNMGPAATGDEVDLDLTNAGKVPVTE
LAGASYFHQADSFAMMRGGHLDVCVLGAFQVSAAGDLANWHTGAPDAIPAVGGAMDLATGARSVFVMMTLFAKDGSPKLV
PQCTYPLTGVGCVNRVYTDVATFEITPDGVRVCETFETSYDELADRLDLTLLPPQG

Sequences:

>Translated_216_residues
MSGGQALTRDDMAALVARDIPPGSYVNLGIGLPTLVADHLAPDSGVVLHTENGMLNMGPAATGDEVDLDLTNAGKVPVTE
LAGASYFHQADSFAMMRGGHLDVCVLGAFQVSAAGDLANWHTGAPDAIPAVGGAMDLATGARSVFVMMTLFAKDGSPKLV
PQCTYPLTGVGCVNRVYTDVATFEITPDGVRVCETFETSYDELADRLDLTLLPPQG
>Mature_215_residues
SGGQALTRDDMAALVARDIPPGSYVNLGIGLPTLVADHLAPDSGVVLHTENGMLNMGPAATGDEVDLDLTNAGKVPVTEL
AGASYFHQADSFAMMRGGHLDVCVLGAFQVSAAGDLANWHTGAPDAIPAVGGAMDLATGARSVFVMMTLFAKDGSPKLVP
QCTYPLTGVGCVNRVYTDVATFEITPDGVRVCETFETSYDELADRLDLTLLPPQG

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI11545841, Length=185, Percent_Identity=45.4054054054054, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI4557817, Length=191, Percent_Identity=44.5026178010471, Blast_Score=158, Evalue=3e-39,
Organism=Escherichia coli, GI1788552, Length=201, Percent_Identity=43.2835820895522, Blast_Score=148, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17531517, Length=190, Percent_Identity=44.7368421052632, Blast_Score=151, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24655794, Length=178, Percent_Identity=46.6292134831461, Blast_Score=159, Evalue=1e-39,
Organism=Drosophila melanogaster, GI21358325, Length=178, Percent_Identity=46.6292134831461, Blast_Score=159, Evalue=1e-39,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.6 [H]

Molecular weight: Translated: 22440; Mature: 22308

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGQALTRDDMAALVARDIPPGSYVNLGIGLPTLVADHLAPDSGVVLHTENGMLNMGPA
CCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCEEEEECCCEEECCCC
ATGDEVDLDLTNAGKVPVTELAGASYFHQADSFAMMRGGHLDVCVLGAFQVSAAGDLANW
CCCCCEEEEECCCCCCCHHHHCCCHHHHHCCCCHHHCCCCEEEEEEEEEEEECCCCCCCC
HTGAPDAIPAVGGAMDLATGARSVFVMMTLFAKDGSPKLVPQCTYPLTGVGCVNRVYTDV
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHE
ATFEITPDGVRVCETFETSYDELADRLDLTLLPPQG
EEEEECCCCHHHHHHHHCCHHHHHHHCCEEEECCCC
>Mature Secondary Structure 
SGGQALTRDDMAALVARDIPPGSYVNLGIGLPTLVADHLAPDSGVVLHTENGMLNMGPA
CCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCEEEEECCCEEECCCC
ATGDEVDLDLTNAGKVPVTELAGASYFHQADSFAMMRGGHLDVCVLGAFQVSAAGDLANW
CCCCCEEEEECCCCCCCHHHHCCCHHHHHCCCCHHHCCCCEEEEEEEEEEEECCCCCCCC
HTGAPDAIPAVGGAMDLATGARSVFVMMTLFAKDGSPKLVPQCTYPLTGVGCVNRVYTDV
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHE
ATFEITPDGVRVCETFETSYDELADRLDLTLLPPQG
EEEEECCCCHHHHHHHHCCHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]