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The map label for this gene is yagI [C]

Identifier: 119715251

GI number: 119715251

Start: 1061338

End: 1061739

Strand: Reverse

Name: yagI [C]

Synonym: Noca_1008

Alternate gene names: 119715251

Gene position: 1061739-1061338 (Counterclockwise)

Preceding gene: 119715253

Following gene: 119715250

Centisome position: 21.29

GC content: 78.11

Gene sequence:

>402_bases
GTGAACAGCCGATCGAGCAGGCCGCGCGCGATCAGCCGGATGGGCACCCGGCTGCCGCTGCACGCCACCGGCGTGGGGAA
GGTGCTGCTGGCGCACGCCCCCGCCGACGTCCGGGACCGGGTGCTGGGCGAGCTGGCCGCGGTGACGCCGGACACCGTGA
CCTCGCGGCGGGTGCTGGCCGGCCAGCTCGAGCGGGTGCGGCGCGACGGCTACGCGACCACGACCGAGGAGATGACGCTC
GGCGCGTCCTCGGTGGCGGTGCCGGTGCAGGTCGACGGCGCGACGGTCGCCGCGATGGGGGTGGTCGTCGCGGACTTCCG
GCGGCACCGCGCCCGCCTGCTGGCCGGGCTCCTGGTCGCCGCCGCGGGCGTGGGACGCGGCCTGGGCCAGGCGCCGTCGT
AG

Upstream 100 bases:

>100_bases
CTGCTCGTCGCGGCCCGCGACCAGCGTGTGCCGGCGGCCCGGGTCGACGGCGGAGAGCAGCGGCCCGGCCGCCTCGTCGA
CACCGGGCAGGTAGGCCCGG

Downstream 100 bases:

>100_bases
CCTCGGGGGCATGGTCCGTCGTCTCGCCCCACCACTGCTCGTCCTCGGCCTCGCGACCGTGCTGGCCCTCCCGCTGGTGC
CCGTCGGGGCGCTGGCTGCC

Product: regulatory proteins IclR

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Regulatory Proteins IclR; Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator IclR; Regulatory Protein IclR; IclR-Family Transcriptional Regulator

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNSRSSRPRAISRMGTRLPLHATGVGKVLLAHAPADVRDRVLGELAAVTPDTVTSRRVLAGQLERVRRDGYATTTEEMTL
GASSVAVPVQVDGATVAAMGVVVADFRRHRARLLAGLLVAAAGVGRGLGQAPS

Sequences:

>Translated_133_residues
MNSRSSRPRAISRMGTRLPLHATGVGKVLLAHAPADVRDRVLGELAAVTPDTVTSRRVLAGQLERVRRDGYATTTEEMTL
GASSVAVPVQVDGATVAAMGVVVADFRRHRARLLAGLLVAAAGVGRGLGQAPS
>Mature_133_residues
MNSRSSRPRAISRMGTRLPLHATGVGKVLLAHAPADVRDRVLGELAAVTPDTVTSRRVLAGQLERVRRDGYATTTEEMTL
GASSVAVPVQVDGATVAAMGVVVADFRRHRARLLAGLLVAAAGVGRGLGQAPS

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786468, Length=82, Percent_Identity=43.9024390243902, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13817; Mature: 13817

Theoretical pI: Translated: 12.13; Mature: 12.13

Prosite motif: PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRSSRPRAISRMGTRLPLHATGVGKVLLAHAPADVRDRVLGELAAVTPDTVTSRRVLA
CCCCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHH
GQLERVRRDGYATTTEEMTLGASSVAVPVQVDGATVAAMGVVVADFRRHRARLLAGLLVA
HHHHHHHHCCCCCCCHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGVGRGLGQAPS
HHHHCCCCCCCCC
>Mature Secondary Structure
MNSRSSRPRAISRMGTRLPLHATGVGKVLLAHAPADVRDRVLGELAAVTPDTVTSRRVLA
CCCCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHH
GQLERVRRDGYATTTEEMTLGASSVAVPVQVDGATVAAMGVVVADFRRHRARLLAGLLVA
HHHHHHHHCCCCCCCHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGVGRGLGQAPS
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA