| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715229
Identifier: 119715229
GI number: 119715229
Start: 1034213
End: 1034914
Strand: Reverse
Name: 119715229
Synonym: Noca_0986
Alternate gene names: NA
Gene position: 1034914-1034213 (Counterclockwise)
Preceding gene: 119715230
Following gene: 119715228
Centisome position: 20.76
GC content: 77.92
Gene sequence:
>702_bases GTGCTCGCCTCCCGGACCCGCGCGGCGACGCCGTACGCCGCCTGGGTGGCGGCGTGCGCGCTCGCCGAAGGGGTCGGCAT GACCGCGGCCGCCGGTGCGGCCCGGTTCGCCGACCCCCTCGGCACCGCCGCCGGGCTGGCGGTCGTGGTGGCCGGCGGCC TGGTCGAGGGCACGGCACTGGGCTGGGCCCAGTCGCACGTGCTGGTCCGGCTGGCTCCCACGCTGACCCGGCGGCGGTAC CTCGTCGCGACCGTCCTCGTCGCCGGCCTGGGGTGGGCGGGGGCCTCGGCGCCCGCGGCCCTCGGCAGCGGCGGCTCGGG AGCCGACCAGCCACCGCTCGCGCTGATCCTGCTCGGGGCCGCCGGACTCGGCTTGGCGATGGGCCCGGCGCTCGGCGCGG CCCAGGCGATCGCACTACGTGGGACGGTGCCGCACCCGTGGCGGTGGGTCGCGGCCAACACTGCGGCGTGGCCGGTGGCC ATGACCGTGATCTTCCTCGGCGCCACAGCGCCGGACACGACCTGGCCGGTCTGGTCGGTCCTGGTCCTCGGGACCGTGAC AGGGGTCGTGGCCGGTGGCCTGCTGGGCGTGGTGTCGGGGTGGTTCCTCCCGTCGCTGACCGGAGCGACGGGTGTGGACC GGACCGGGTGGTACTGGCGCCCCGCGCCGCGTGCCGCCGACCGGGGTGGCAACGCATCCTGA
Upstream 100 bases:
>100_bases GTGCTCGCCGCCCAGGCGACCGGCCCCCGGTCCGACGTCCGCTGAGAGTGGTGACCTAAGCCCCTGATCAGCCGCGCGGG TTCCGGGATGGAATGAGGCC
Downstream 100 bases:
>100_bases TCGGCGTCGTACGCGGTCGCTCGGGGCGTCAGTGCCGCCTGACCGGGCCACGGCCGGCGACCCGGCGTGGCCAAGTCCCC TGCCGTGGCGTGACCTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MLASRTRAATPYAAWVAACALAEGVGMTAAAGAARFADPLGTAAGLAVVVAGGLVEGTALGWAQSHVLVRLAPTLTRRRY LVATVLVAGLGWAGASAPAALGSGGSGADQPPLALILLGAAGLGLAMGPALGAAQAIALRGTVPHPWRWVAANTAAWPVA MTVIFLGATAPDTTWPVWSVLVLGTVTGVVAGGLLGVVSGWFLPSLTGATGVDRTGWYWRPAPRAADRGGNAS
Sequences:
>Translated_233_residues MLASRTRAATPYAAWVAACALAEGVGMTAAAGAARFADPLGTAAGLAVVVAGGLVEGTALGWAQSHVLVRLAPTLTRRRY LVATVLVAGLGWAGASAPAALGSGGSGADQPPLALILLGAAGLGLAMGPALGAAQAIALRGTVPHPWRWVAANTAAWPVA MTVIFLGATAPDTTWPVWSVLVLGTVTGVVAGGLLGVVSGWFLPSLTGATGVDRTGWYWRPAPRAADRGGNAS >Mature_233_residues MLASRTRAATPYAAWVAACALAEGVGMTAAAGAARFADPLGTAAGLAVVVAGGLVEGTALGWAQSHVLVRLAPTLTRRRY LVATVLVAGLGWAGASAPAALGSGGSGADQPPLALILLGAAGLGLAMGPALGAAQAIALRGTVPHPWRWVAANTAAWPVA MTVIFLGATAPDTTWPVWSVLVLGTVTGVVAGGLLGVVSGWFLPSLTGATGVDRTGWYWRPAPRAADRGGNAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23061; Mature: 23061
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASRTRAATPYAAWVAACALAEGVGMTAAAGAARFADPLGTAAGLAVVVAGGLVEGTAL CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHH GWAQSHVLVRLAPTLTRRRYLVATVLVAGLGWAGASAPAALGSGGSGADQPPLALILLGA CHHHHCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEECC AGLGLAMGPALGAAQAIALRGTVPHPWRWVAANTAAWPVAMTVIFLGATAPDTTWPVWSV CCCHHHHCCHHHHHHEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHH LVLGTVTGVVAGGLLGVVSGWFLPSLTGATGVDRTGWYWRPAPRAADRGGNAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MLASRTRAATPYAAWVAACALAEGVGMTAAAGAARFADPLGTAAGLAVVVAGGLVEGTAL CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHH GWAQSHVLVRLAPTLTRRRYLVATVLVAGLGWAGASAPAALGSGGSGADQPPLALILLGA CHHHHCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEECC AGLGLAMGPALGAAQAIALRGTVPHPWRWVAANTAAWPVAMTVIFLGATAPDTTWPVWSV CCCHHHHCCHHHHHHEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHH LVLGTVTGVVAGGLLGVVSGWFLPSLTGATGVDRTGWYWRPAPRAADRGGNAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA