| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715228
Identifier: 119715228
GI number: 119715228
Start: 1033291
End: 1034013
Strand: Reverse
Name: 119715228
Synonym: Noca_0985
Alternate gene names: NA
Gene position: 1034013-1033291 (Counterclockwise)
Preceding gene: 119715229
Following gene: 119715227
Centisome position: 20.74
GC content: 75.1
Gene sequence:
>723_bases ATGAGCGTGTCCAGCCCCCAGTCCCTCCCCGAGGTGCACGCGGCCCCACGGCGCCCGTGGCGGACCGGCCGGGTGCTCGC GACCGTGACGGCCGCGCTGTTCCTGCTGCTCGGGGTCGGCATGCTGGTCGGTGGCGGCGCCCTCCGCCTGGCGGACGCGA CGCTGCGCGACGACGACGGCTACGTGATGAGCAGCGCGCACGCCTGGCAGTCGCCGGGGTACGCCGTACGCTCCGAGAGC GCGGAGATCCGGAGCGACTCGACCACCTTGGACCTGCCGCACCGTCTCCTCGGCACGATGACCGCCACCGCCGACCCGGC CACCCCGAACGGCGTCTTCCTGGGCGTGGCGCGGACCGCGGACGTCGACCGGTACCTCACGGACGTCGCACAGTCGACCG TCGTCGACCCGTTCGACGAGAACGGCGAGCCGTCCCTCTCCTTCGTCGACGGCGGCTCCCCGGCCGTCGCCCCGACCGCG GCGGGGTTCTGGGTGGCCTCCGCGCGCGGGCGCGGGCCGCAGCAGGTCACCTGGGAGCCCGAGGACGGCGACTGGACGCT GGTCGTGATGAACGGCGAGGGCACCACCCCGGTCGCCGCGGACGTGGCGATCGGCGCCGAGGTCCCGGTGCTCGGCACCC TCGGCACCTGGCTGCTGGTCGCCGGCCTGATCGTGGTCGGGCTCTCCGGCATCGGCCTGTGGCTGGCCGTCCGTCGGCGC TGA
Upstream 100 bases:
>100_bases CCCCTGCTCCGCGCGTCGGCGCCGCAGCACGCTGGACGGCGTAGGACGCCCGATCCGCGCGAAGGTCGTGGCGACGGATG GTCGACGAGATGAACGACGA
Downstream 100 bases:
>100_bases GCACGGGTTGAAGGGACCTCCGGCCCTGCCGGTCGGACCGCGCCGCGCGCACGCTCGGAGGGGCACCCAGCTCGGAGGAG GGCACCATGAGCGCAGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSVSSPQSLPEVHAAPRRPWRTGRVLATVTAALFLLLGVGMLVGGGALRLADATLRDDDGYVMSSAHAWQSPGYAVRSES AEIRSDSTTLDLPHRLLGTMTATADPATPNGVFLGVARTADVDRYLTDVAQSTVVDPFDENGEPSLSFVDGGSPAVAPTA AGFWVASARGRGPQQVTWEPEDGDWTLVVMNGEGTTPVAADVAIGAEVPVLGTLGTWLLVAGLIVVGLSGIGLWLAVRRR
Sequences:
>Translated_240_residues MSVSSPQSLPEVHAAPRRPWRTGRVLATVTAALFLLLGVGMLVGGGALRLADATLRDDDGYVMSSAHAWQSPGYAVRSES AEIRSDSTTLDLPHRLLGTMTATADPATPNGVFLGVARTADVDRYLTDVAQSTVVDPFDENGEPSLSFVDGGSPAVAPTA AGFWVASARGRGPQQVTWEPEDGDWTLVVMNGEGTTPVAADVAIGAEVPVLGTLGTWLLVAGLIVVGLSGIGLWLAVRRR >Mature_239_residues SVSSPQSLPEVHAAPRRPWRTGRVLATVTAALFLLLGVGMLVGGGALRLADATLRDDDGYVMSSAHAWQSPGYAVRSESA EIRSDSTTLDLPHRLLGTMTATADPATPNGVFLGVARTADVDRYLTDVAQSTVVDPFDENGEPSLSFVDGGSPAVAPTAA GFWVASARGRGPQQVTWEPEDGDWTLVVMNGEGTTPVAADVAIGAEVPVLGTLGTWLLVAGLIVVGLSGIGLWLAVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24999; Mature: 24868
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSSPQSLPEVHAAPRRPWRTGRVLATVTAALFLLLGVGMLVGGGALRLADATLRDDDG CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCC YVMSSAHAWQSPGYAVRSESAEIRSDSTTLDLPHRLLGTMTATADPATPNGVFLGVARTA EEEECCCCCCCCCCEEECCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCEEEEEECCC DVDRYLTDVAQSTVVDPFDENGEPSLSFVDGGSPAVAPTAAGFWVASARGRGPQQVTWEP HHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECC EDGDWTLVVMNGEGTTPVAADVAIGAEVPVLGTLGTWLLVAGLIVVGLSGIGLWLAVRRR CCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECC >Mature Secondary Structure SVSSPQSLPEVHAAPRRPWRTGRVLATVTAALFLLLGVGMLVGGGALRLADATLRDDDG CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCC YVMSSAHAWQSPGYAVRSESAEIRSDSTTLDLPHRLLGTMTATADPATPNGVFLGVARTA EEEECCCCCCCCCCEEECCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCEEEEEECCC DVDRYLTDVAQSTVVDPFDENGEPSLSFVDGGSPAVAPTAAGFWVASARGRGPQQVTWEP HHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECC EDGDWTLVVMNGEGTTPVAADVAIGAEVPVLGTLGTWLLVAGLIVVGLSGIGLWLAVRRR CCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA