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The map label for this gene is perM [C]

Identifier: 119715222

GI number: 119715222

Start: 1026737

End: 1028095

Strand: Direct

Name: perM [C]

Synonym: Noca_0978

Alternate gene names: 119715222

Gene position: 1026737-1028095 (Clockwise)

Preceding gene: 119715221

Following gene: 119715223

Centisome position: 20.59

GC content: 72.41

Gene sequence:

>1359_bases
GTGAGCAACGACGCTGACGGCCCCGCGGTGCCGGACCGGCCCGCGGCCCGCCCCCAGGGCCGGCGTCGACTGCCCTCGAT
CAGCCTGCGGCCGCGACCCGCCGAGGACCCCGAGGGCACCGAGGAGGGCATCGCCTCCCGGATCGCCCACCAATGGGCCA
CGATGCGCGACGAGCGGCGCGCGCAGCCGGCGCCGATCGTCACCGGGCCGTCGAACTTCAGCCGCGCCCAGGTGCCCTGG
GGGATCGACCTCGCCGCGGCGTGGGCGTGGCGGTTCCTGGTGATCGCCGCAGCCGCCTACGTGCTGCTGTGGCTGGTCGC
CTTCTTCGCCGTGGTGACGATCCCGCTGATCGTCGCGCTGCTGATCGCGGCGCTCGTGGTGCCGGTGGTCGACGGCCTGC
ACCGGGTCGGGCTGCCGCGCGGGCTCGCCGCGCTGCTCGTCGTGCTCGCCGGGATCGCGTTCGTCGTCGCGTTGCTCACC
TTCGCGGGCCAACAGGTCGCGACCGGCGCCCAGGACCTGGCCGACCAGTCCGCCAAGGGCCTCGGCGAGATCAAGGACTG
GCTGCGCGACGGGCCGCTGCACGCCAGCGACTCGCAGATCAACGACTACATCCAGCGGGCTCAGGACGGGCTGGAGAACA
CCGGCAAGGGGATCGACCTCGGCAGTGTCACCGAGGTCGGCACCGCGGTCGGGCACATCTTCGCGGGCCTCTTCATCGTG
TTGTTCTCGACCTACTTCTTCCTCGCCGACGGGGAGCGGATCTGGGCCTGGATGGTGCGGTTGGCGCCGCGGGCCGCCCG
GCAGCACGTCGACAGCTCGGGCCGGGTGGCGTGGATCTCGCTCACCCAGTTCGTGCGCGCGACGGTGATCGTCGCGGCCG
TGGACGCGCTGGGCATCATGGTGGTCGCCGGCATCCTGGGGTTGCCCTTCGTGCTCGCGCTCGGGGTGCTGGTCTTCCTC
GGCGCGTTCGTGCCGATGGTCGGTGCCACCGTGGCCGGCACCGTCGCGGTGCTCGTCGCCCTGGTCGACCAGGGGCCGAT
CACCGCGCTGTTCATGCTCGGCGGGGTGATCCTCGTGCAGCAGCTCGAGGGGCACGTGCTGCAGCCGTTCCTCATGGGCC
GCTGGGTCTCGCTGCACCCGCTGGGCGTGATCGTCGCGATCGGCTGCGGTGTGCTGGTCGCGGGGATCGCCGGTGCGCTG
GTCGCCGTACCCCTGGCGGCGGCACTGAACGCCGTCGTCCAGCACCTGGCCGTCAGCACCGACATCGGGGAGGACGACCC
GGTCGAGGAGCTCGAGGAGGACTACGAGGAGATGGGCGCGTCCGCGGACGTCCCGGAGGAGGACGGGCGTGATGACTGA

Upstream 100 bases:

>100_bases
CGTCCTGGCCGCGGCCGGGCTGCTCGCGGCGGCGCACCCGGAGGCGGCGTACCGCCTCGCGATGACGCTCACCGGGCCCG
ACGCTGGATAGCCTGTCGCC

Downstream 100 bases:

>100_bases
GGTCCCGACGGTCGGGCTGGCCGACATCGAGGAGGCCCGCCGGGTCCTGGCCGGCGTCGCGATCCAGACCCCGATGGAGG
AGTCCCGCTGGCTCTCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSNDADGPAVPDRPAARPQGRRRLPSISLRPRPAEDPEGTEEGIASRIAHQWATMRDERRAQPAPIVTGPSNFSRAQVPW
GIDLAAAWAWRFLVIAAAAYVLLWLVAFFAVVTIPLIVALLIAALVVPVVDGLHRVGLPRGLAALLVVLAGIAFVVALLT
FAGQQVATGAQDLADQSAKGLGEIKDWLRDGPLHASDSQINDYIQRAQDGLENTGKGIDLGSVTEVGTAVGHIFAGLFIV
LFSTYFFLADGERIWAWMVRLAPRAARQHVDSSGRVAWISLTQFVRATVIVAAVDALGIMVVAGILGLPFVLALGVLVFL
GAFVPMVGATVAGTVAVLVALVDQGPITALFMLGGVILVQQLEGHVLQPFLMGRWVSLHPLGVIVAIGCGVLVAGIAGAL
VAVPLAAALNAVVQHLAVSTDIGEDDPVEELEEDYEEMGASADVPEEDGRDD

Sequences:

>Translated_452_residues
MSNDADGPAVPDRPAARPQGRRRLPSISLRPRPAEDPEGTEEGIASRIAHQWATMRDERRAQPAPIVTGPSNFSRAQVPW
GIDLAAAWAWRFLVIAAAAYVLLWLVAFFAVVTIPLIVALLIAALVVPVVDGLHRVGLPRGLAALLVVLAGIAFVVALLT
FAGQQVATGAQDLADQSAKGLGEIKDWLRDGPLHASDSQINDYIQRAQDGLENTGKGIDLGSVTEVGTAVGHIFAGLFIV
LFSTYFFLADGERIWAWMVRLAPRAARQHVDSSGRVAWISLTQFVRATVIVAAVDALGIMVVAGILGLPFVLALGVLVFL
GAFVPMVGATVAGTVAVLVALVDQGPITALFMLGGVILVQQLEGHVLQPFLMGRWVSLHPLGVIVAIGCGVLVAGIAGAL
VAVPLAAALNAVVQHLAVSTDIGEDDPVEELEEDYEEMGASADVPEEDGRDD
>Mature_451_residues
SNDADGPAVPDRPAARPQGRRRLPSISLRPRPAEDPEGTEEGIASRIAHQWATMRDERRAQPAPIVTGPSNFSRAQVPWG
IDLAAAWAWRFLVIAAAAYVLLWLVAFFAVVTIPLIVALLIAALVVPVVDGLHRVGLPRGLAALLVVLAGIAFVVALLTF
AGQQVATGAQDLADQSAKGLGEIKDWLRDGPLHASDSQINDYIQRAQDGLENTGKGIDLGSVTEVGTAVGHIFAGLFIVL
FSTYFFLADGERIWAWMVRLAPRAARQHVDSSGRVAWISLTQFVRATVIVAAVDALGIMVVAGILGLPFVLALGVLVFLG
AFVPMVGATVAGTVAVLVALVDQGPITALFMLGGVILVQQLEGHVLQPFLMGRWVSLHPLGVIVAIGCGVLVAGIAGALV
AVPLAAALNAVVQHLAVSTDIGEDDPVEELEEDYEEMGASADVPEEDGRDD

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=320, Percent_Identity=27.5, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 47585; Mature: 47454

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNDADGPAVPDRPAARPQGRRRLPSISLRPRPAEDPEGTEEGIASRIAHQWATMRDERR
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC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CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]