Click here to switch to the map view.

The map label for this gene is 119715202

Identifier: 119715202

GI number: 119715202

Start: 1007322

End: 1008170

Strand: Reverse

Name: 119715202

Synonym: Noca_0957

Alternate gene names: NA

Gene position: 1008170-1007322 (Counterclockwise)

Preceding gene: 119715203

Following gene: 119715200

Centisome position: 20.22

GC content: 75.27

Gene sequence:

>849_bases
GTGCGGATCGTCTCGTTGCTGCCCTCGACGACCGAGATCCTGTTCGCGATCGGCGCGGGTCCCGACGTCGTCGGGGTCAC
CTTCGAGTGCGACTACCCGGCCGAGGCCCGGGCCCGGACCGTGGTGTCGACCTCGGCGATGCCCTCCGGGCTGACGCCGG
CGGAGATCGACGCGTACGTCGTCGGCGCGCTGTCTCGCGGCGAGGACCTGTACCACCTGGCCGCGGACGCGCTCGCCGGC
CTCGACGCCGACCTCGTGGTCACCCAGGACCTGTGCGCGGTCTGCGCCGTCGACGTGTCCGTGGTCGACGACGCGCTGGC
CCACCTGGGCTGCACCGCCGAGGTGCTCACGATCGACCCCCACACGTTGGACGAGGTGCTCGACTCGATCCTGCTGCTCG
GCCGGGTCACCGGTCGTACCGTGGAGGCGACGGCGCTGGTCGCGGCGCAGCGGAACCGGCTCGCCGCGGCCGCCGCGCGC
GTGGCCGGTCGCCCGCGGCCCCGGGTGATGCTGCTCGAGTGGACCGATCCGCCGTACGCGCCGGGCCACTGGGTGCCGGA
GATGATCGAGGCGGCCGGCGGCGTGGCCCTGCTCGGGAAGCCCGGCGCGAAGTCCGAGCGGGTGCTGTGGGAGCAGGTGC
ACGAGGCGGCGCCCGACGTCGTCGTGTGCGCGCCGTGCGGCTACGACCTGGAGGGCGCGCGGTCGCTCGCCGCCGACCTG
GTCGCCTCGGGCGTGCTGCCCTCCGGCGTACCCGTGCACGCCGTCGACGCCAACGCCGCCTGGGCCCGTCCGGGCACCCG
GCTCGTCGACGGCGTGGAGGAGCTGGCCGCGATCCTGCACCCGGCCTGA

Upstream 100 bases:

>100_bases
GCGCTCGAGAGCGTCTGATCCCGGGTCGATCCTCGAGCAGGTGGACCGATCCGCACGCGCCGCCCCCACAGGGTCCGACT
AGCGAAGCTAGGGTCGGGGC

Downstream 100 bases:

>100_bases
GCCCGGTCGGCGACTCGACCCGTCAGGCCGCGGCCTGGTCCCACGTGCGGACCAGGCGCAGGCCGGCGGCCCAGCCCGGT
GCCCGGCCACCCGCAGGTGG

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRIVSLLPSTTEILFAIGAGPDVVGVTFECDYPAEARARTVVSTSAMPSGLTPAEIDAYVVGALSRGEDLYHLAADALAG
LDADLVVTQDLCAVCAVDVSVVDDALAHLGCTAEVLTIDPHTLDEVLDSILLLGRVTGRTVEATALVAAQRNRLAAAAAR
VAGRPRPRVMLLEWTDPPYAPGHWVPEMIEAAGGVALLGKPGAKSERVLWEQVHEAAPDVVVCAPCGYDLEGARSLAADL
VASGVLPSGVPVHAVDANAAWARPGTRLVDGVEELAAILHPA

Sequences:

>Translated_282_residues
MRIVSLLPSTTEILFAIGAGPDVVGVTFECDYPAEARARTVVSTSAMPSGLTPAEIDAYVVGALSRGEDLYHLAADALAG
LDADLVVTQDLCAVCAVDVSVVDDALAHLGCTAEVLTIDPHTLDEVLDSILLLGRVTGRTVEATALVAAQRNRLAAAAAR
VAGRPRPRVMLLEWTDPPYAPGHWVPEMIEAAGGVALLGKPGAKSERVLWEQVHEAAPDVVVCAPCGYDLEGARSLAADL
VASGVLPSGVPVHAVDANAAWARPGTRLVDGVEELAAILHPA
>Mature_282_residues
MRIVSLLPSTTEILFAIGAGPDVVGVTFECDYPAEARARTVVSTSAMPSGLTPAEIDAYVVGALSRGEDLYHLAADALAG
LDADLVVTQDLCAVCAVDVSVVDDALAHLGCTAEVLTIDPHTLDEVLDSILLLGRVTGRTVEATALVAAQRNRLAAAAAR
VAGRPRPRVMLLEWTDPPYAPGHWVPEMIEAAGGVALLGKPGAKSERVLWEQVHEAAPDVVVCAPCGYDLEGARSLAADL
VASGVLPSGVPVHAVDANAAWARPGTRLVDGVEELAAILHPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29195; Mature: 29195

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVSLLPSTTEILFAIGAGPDVVGVTFECDYPAEARARTVVSTSAMPSGLTPAEIDAYV
CCEEECCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHEEEECCCCCCCCCCHHCCCEE
VGALSRGEDLYHLAADALAGLDADLVVTQDLCAVCAVDVSVVDDALAHLGCTAEVLTIDP
EEEHHCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
HTLDEVLDSILLLGRVTGRTVEATALVAAQRNRLAAAAARVAGRPRPRVMLLEWTDPPYA
HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PGHWVPEMIEAAGGVALLGKPGAKSERVLWEQVHEAAPDVVVCAPCGYDLEGARSLAADL
CCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
VASGVLPSGVPVHAVDANAAWARPGTRLVDGVEELAAILHPA
HHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIVSLLPSTTEILFAIGAGPDVVGVTFECDYPAEARARTVVSTSAMPSGLTPAEIDAYV
CCEEECCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHEEEECCCCCCCCCCHHCCCEE
VGALSRGEDLYHLAADALAGLDADLVVTQDLCAVCAVDVSVVDDALAHLGCTAEVLTIDP
EEEHHCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
HTLDEVLDSILLLGRVTGRTVEATALVAAQRNRLAAAAARVAGRPRPRVMLLEWTDPPYA
HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PGHWVPEMIEAAGGVALLGKPGAKSERVLWEQVHEAAPDVVVCAPCGYDLEGARSLAADL
CCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
VASGVLPSGVPVHAVDANAAWARPGTRLVDGVEELAAILHPA
HHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA