Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715203

Identifier: 119715203

GI number: 119715203

Start: 1008253

End: 1008927

Strand: Reverse

Name: 119715203

Synonym: Noca_0958

Alternate gene names: NA

Gene position: 1008927-1008253 (Counterclockwise)

Preceding gene: 119715208

Following gene: 119715202

Centisome position: 20.24

GC content: 68.74

Gene sequence:

>675_bases
ATGCACCGCCGCTGGCTGACCCGGGCGCTGATCGCGCTCGCCGCCCCCGCCCTCGCCCTCGCCGCGACCACCGCTCCCGC
CACCGCGGCCGAGTCCGGCGCACAGGTCCCGAGCATCGACGACGTCGCCACGATCTACCCGCACCTCGAGGGCGGCACCG
CCAGCGAGAGCGGCGGCAAGGTCTACGGGCCGGGCAAGAAGTGCCACACCACCAAGGTGATCAAGGGAGCGTCGCAGCGC
AGCGCGTCGTACTCCCCCGACTACATCTCCGGTGACCCGGACGTGTTCGCGATGACCGGCGAGCACCCGGGCGTCTCGGC
GATCGCGATGCAGTTCCCGTCGGCCAAGGCGGCGATCAAGTACCTGCACGGCTACGCGGCCCAGTCCAAGAAGTGCCCAT
CGACCACCCCCGGTGGTGGAGGCGGCGGGGGCGGCGGGTCGCACTGCAAGACCTCGATGAAGAAGATCAAGTTCAGCCTC
GGCGACGAGCGCTGGGGCTACCAGGTCAGGTCGACCTGCAAGACCGGTGACCAGACGACGTCGATGGTCTTCAACTCGCT
GTTCGCCCACCAGGGCGAGTTCATCGTCTACACGAGCACGATGTCGATGGACGCCTCCGCGCCGTCGATCCCGAAGTCGA
TCGACCTGACCGAGCTGGCGCTCGAGAGCGTCTGA

Upstream 100 bases:

>100_bases
GGTTCCCCCACCGAACCGGATCGGCCGCCCCGGTGCACCAGCACCGGGAACCTCCGAGACCGACGGACGACCGACCGACC
GACGACAGAGAGAGAACACC

Downstream 100 bases:

>100_bases
TCCCGGGTCGATCCTCGAGCAGGTGGACCGATCCGCACGCGCCGCCCCCACAGGGTCCGACTAGCGAAGCTAGGGTCGGG
GCGTGCGGATCGTCTCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MHRRWLTRALIALAAPALALAATTAPATAAESGAQVPSIDDVATIYPHLEGGTASESGGKVYGPGKKCHTTKVIKGASQR
SASYSPDYISGDPDVFAMTGEHPGVSAIAMQFPSAKAAIKYLHGYAAQSKKCPSTTPGGGGGGGGGSHCKTSMKKIKFSL
GDERWGYQVRSTCKTGDQTTSMVFNSLFAHQGEFIVYTSTMSMDASAPSIPKSIDLTELALESV

Sequences:

>Translated_224_residues
MHRRWLTRALIALAAPALALAATTAPATAAESGAQVPSIDDVATIYPHLEGGTASESGGKVYGPGKKCHTTKVIKGASQR
SASYSPDYISGDPDVFAMTGEHPGVSAIAMQFPSAKAAIKYLHGYAAQSKKCPSTTPGGGGGGGGGSHCKTSMKKIKFSL
GDERWGYQVRSTCKTGDQTTSMVFNSLFAHQGEFIVYTSTMSMDASAPSIPKSIDLTELALESV
>Mature_224_residues
MHRRWLTRALIALAAPALALAATTAPATAAESGAQVPSIDDVATIYPHLEGGTASESGGKVYGPGKKCHTTKVIKGASQR
SASYSPDYISGDPDVFAMTGEHPGVSAIAMQFPSAKAAIKYLHGYAAQSKKCPSTTPGGGGGGGGGSHCKTSMKKIKFSL
GDERWGYQVRSTCKTGDQTTSMVFNSLFAHQGEFIVYTSTMSMDASAPSIPKSIDLTELALESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23251; Mature: 23251

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRRWLTRALIALAAPALALAATTAPATAAESGAQVPSIDDVATIYPHLEGGTASESGGK
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCE
VYGPGKKCHTTKVIKGASQRSASYSPDYISGDPDVFAMTGEHPGVSAIAMQFPSAKAAIK
EECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHH
YLHGYAAQSKKCPSTTPGGGGGGGGGSHCKTSMKKIKFSLGDERWGYQVRSTCKTGDQTT
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHH
SMVFNSLFAHQGEFIVYTSTMSMDASAPSIPKSIDLTELALESV
HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MHRRWLTRALIALAAPALALAATTAPATAAESGAQVPSIDDVATIYPHLEGGTASESGGK
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCE
VYGPGKKCHTTKVIKGASQRSASYSPDYISGDPDVFAMTGEHPGVSAIAMQFPSAKAAIK
EECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHH
YLHGYAAQSKKCPSTTPGGGGGGGGGSHCKTSMKKIKFSLGDERWGYQVRSTCKTGDQTT
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHH
SMVFNSLFAHQGEFIVYTSTMSMDASAPSIPKSIDLTELALESV
HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA