| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715165
Identifier: 119715165
GI number: 119715165
Start: 965534
End: 967063
Strand: Direct
Name: 119715165
Synonym: Noca_0920
Alternate gene names: NA
Gene position: 965534-967063 (Clockwise)
Preceding gene: 119715164
Following gene: 119715166
Centisome position: 19.37
GC content: 70.26
Gene sequence:
>1530_bases ATGTTTGTACGCAAGACCCTTGCGGGCGTCATCGCGACGGCCCTCGCCGGCTCGGTCGTGGCCCTCGCGGGCCCGGCCTC CGCGGCCGCCGACCCCGACGACACCACCTTCACCCCGACGACCGCCGACCTGATCGGCGTCGGCTCCGACACCAGCCAGC ACGCGATCAAGCTCTTCGCCGACGCGTGGAACAGCAGCGGCGAGGCCCCGGTCAAGCTCGCGACGTACGCCGCCACCGGC GGCGGCCAGATCACCCTGCCCAGCGGCGCCATCAACCGGCCGAACGGCTCGGGCGCCGGCAAGTCGCTGCTCTACGGCGC GGGCAACAACACCGACATCGACTTCGCCCGCTCCTCCTCGGCGCAGAACGCCAACGAGACCCAGGCCGGGCTGCAGTCCT TCCCGTTCGCGCTCGACACGCTGGTCATGGCGGTCTCGAACAGCGTGCCGTCCAACGCGCCGGCGTCGCTGACCGTCGAG CAGATCGTCAAGATCTACAAGGGCGAGATCACGAACTGGAACCAGGTCGGTGGCAAGGACGGCGTCATCGCGCCGAAGGT CCCGCAGGCCGGATCCGGCACCCGGAGCTTCTTCGAGTCCAAGCTCACCGCGGCCAACGGCGGCGTCAAGGTGGTGTACG CGCAGAGCGTCGCGGAGGTCCAGGAGCACGACGACTCGGACGTCAAGAACAACGCGAACGCGGTGGCGCCGTTCTCCAAG GGCAGGGCCGGCCTGCTCGGCAGCACCCTGCGCCTGGAGTCCGGCTGGAGCGCGGACCGGGCGCTGTACAACGTGGTGCG CGGCACCGACCTCGGCAACCCGCTGATCCAGGGCGCGTTCGGCGAGGACGGCGCACTGTGTTCCACCGAGCTCCGCCCGC TGATCGAGGCCGCCGGCTTCGAGCAGCTCGCGACCCCGGCCAACGGCGGCGTGTGCGGCCAGGCGACGCAGTCCGCGACG AGCAACTTCGCGGTCAACGAGCAGGTCGTGAGCACCACCACGCTGGAGGCCTCCAGCCCCAAGGCGAAGACCGCCAAGCT GGTCGCCACGGTCACCGCCGCCACCTCGCCCTCGGGCTCGGTGGACTTCTTCGAGGGCGAGACCCAGGTCGCGAACGACG TCCCGCTGGTCTCCGGCGCGGCGACGTTCACCGCCACCGGCGTCACCCCTGGCGAGCACACCTACACCGCCGTCTTCAAC CCGAGCGAGGGCTCCACGGTGGACCCGTCCGAGGGCGAGGACACCGTCTCGGTGAAGACCTCCGCCACGGTTTCCGAGAC CTTCCCGGCCGCGGTTGCCGCGGGCGCGAAGGCCAAGGGCACCGTGACCGTCGTCGGCGACGGCGCGACCGCCACCGGCA AGGTCACGATCATGCAGGGCGCCAAGGTCCTCAAGAGCGCGACCCTCAAGGGCGGCAAGGCGACCTTCACGCTCAAGCTC GCCAAGGGCAAGAACAAGCTCAAGGCGGTCTACGGCGGCAACGCCGCGGTCGCCGGGGCGAAGAAGTCCTTCACGATCAA GCAGAAGTGA
Upstream 100 bases:
>100_bases GCGACTGCTGCCCAACTTGATCTGACCCGACCAGCCGCCTCGGGGCGGTGCAGGAGTGAACACCCGAAAACGCAGCACCC ATCACAGGAAGCGAATCAGG
Downstream 100 bases:
>100_bases CACCCGTTCCACCACCGCTCCACCCGTGATACCGCCGTGCCGGTCCGCCCCCTCCCGGGCGGGCCGGCACGGCACCACCA CCCCGCTCGACTCCGCACCA
Product: phosphate ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MFVRKTLAGVIATALAGSVVALAGPASAAADPDDTTFTPTTADLIGVGSDTSQHAIKLFADAWNSSGEAPVKLATYAATG GGQITLPSGAINRPNGSGAGKSLLYGAGNNTDIDFARSSSAQNANETQAGLQSFPFALDTLVMAVSNSVPSNAPASLTVE QIVKIYKGEITNWNQVGGKDGVIAPKVPQAGSGTRSFFESKLTAANGGVKVVYAQSVAEVQEHDDSDVKNNANAVAPFSK GRAGLLGSTLRLESGWSADRALYNVVRGTDLGNPLIQGAFGEDGALCSTELRPLIEAAGFEQLATPANGGVCGQATQSAT SNFAVNEQVVSTTTLEASSPKAKTAKLVATVTAATSPSGSVDFFEGETQVANDVPLVSGAATFTATGVTPGEHTYTAVFN PSEGSTVDPSEGEDTVSVKTSATVSETFPAAVAAGAKAKGTVTVVGDGATATGKVTIMQGAKVLKSATLKGGKATFTLKL AKGKNKLKAVYGGNAAVAGAKKSFTIKQK
Sequences:
>Translated_509_residues MFVRKTLAGVIATALAGSVVALAGPASAAADPDDTTFTPTTADLIGVGSDTSQHAIKLFADAWNSSGEAPVKLATYAATG GGQITLPSGAINRPNGSGAGKSLLYGAGNNTDIDFARSSSAQNANETQAGLQSFPFALDTLVMAVSNSVPSNAPASLTVE QIVKIYKGEITNWNQVGGKDGVIAPKVPQAGSGTRSFFESKLTAANGGVKVVYAQSVAEVQEHDDSDVKNNANAVAPFSK GRAGLLGSTLRLESGWSADRALYNVVRGTDLGNPLIQGAFGEDGALCSTELRPLIEAAGFEQLATPANGGVCGQATQSAT SNFAVNEQVVSTTTLEASSPKAKTAKLVATVTAATSPSGSVDFFEGETQVANDVPLVSGAATFTATGVTPGEHTYTAVFN PSEGSTVDPSEGEDTVSVKTSATVSETFPAAVAAGAKAKGTVTVVGDGATATGKVTIMQGAKVLKSATLKGGKATFTLKL AKGKNKLKAVYGGNAAVAGAKKSFTIKQK >Mature_509_residues MFVRKTLAGVIATALAGSVVALAGPASAAADPDDTTFTPTTADLIGVGSDTSQHAIKLFADAWNSSGEAPVKLATYAATG GGQITLPSGAINRPNGSGAGKSLLYGAGNNTDIDFARSSSAQNANETQAGLQSFPFALDTLVMAVSNSVPSNAPASLTVE QIVKIYKGEITNWNQVGGKDGVIAPKVPQAGSGTRSFFESKLTAANGGVKVVYAQSVAEVQEHDDSDVKNNANAVAPFSK GRAGLLGSTLRLESGWSADRALYNVVRGTDLGNPLIQGAFGEDGALCSTELRPLIEAAGFEQLATPANGGVCGQATQSAT SNFAVNEQVVSTTTLEASSPKAKTAKLVATVTAATSPSGSVDFFEGETQVANDVPLVSGAATFTATGVTPGEHTYTAVFN PSEGSTVDPSEGEDTVSVKTSATVSETFPAAVAAGAKAKGTVTVVGDGATATGKVTIMQGAKVLKSATLKGGKATFTLKL AKGKNKLKAVYGGNAAVAGAKKSFTIKQK
Specific function: Unknown
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51220; Mature: 51220
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVRKTLAGVIATALAGSVVALAGPASAAADPDDTTFTPTTADLIGVGSDTSQHAIKLFA CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHH DAWNSSGEAPVKLATYAATGGGQITLPSGAINRPNGSGAGKSLLYGAGNNTDIDFARSSS HHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCC AQNANETQAGLQSFPFALDTLVMAVSNSVPSNAPASLTVEQIVKIYKGEITNWNQVGGKD CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCC GVIAPKVPQAGSGTRSFFESKLTAANGGVKVVYAQSVAEVQEHDDSDVKNNANAVAPFSK CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCHHCCCCEECCCCC GRAGLLGSTLRLESGWSADRALYNVVRGTDLGNPLIQGAFGEDGALCSTELRPLIEAAGF CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEHHHHHHHHHHCCH EQLATPANGGVCGQATQSATSNFAVNEQVVSTTTLEASSPKAKTAKLVATVTAATSPSGS HHHCCCCCCCCCCCCHHHCCCCCEECCEEEEEEEECCCCCCCHHEEEEEEEEECCCCCCC VDFFEGETQVANDVPLVSGAATFTATGVTPGEHTYTAVFNPSEGSTVDPSEGEDTVSVKT EEEECCCCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEE SATVSETFPAAVAAGAKAKGTVTVVGDGATATGKVTIMQGAKVLKSATLKGGKATFTLKL CCCHHHHCCHHHHCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEE AKGKNKLKAVYGGNAAVAGAKKSFTIKQK ECCCCEEEEEECCCEEEECCCCCEEEECC >Mature Secondary Structure MFVRKTLAGVIATALAGSVVALAGPASAAADPDDTTFTPTTADLIGVGSDTSQHAIKLFA CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHH DAWNSSGEAPVKLATYAATGGGQITLPSGAINRPNGSGAGKSLLYGAGNNTDIDFARSSS HHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCC AQNANETQAGLQSFPFALDTLVMAVSNSVPSNAPASLTVEQIVKIYKGEITNWNQVGGKD CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCC GVIAPKVPQAGSGTRSFFESKLTAANGGVKVVYAQSVAEVQEHDDSDVKNNANAVAPFSK CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCHHCCCCEECCCCC GRAGLLGSTLRLESGWSADRALYNVVRGTDLGNPLIQGAFGEDGALCSTELRPLIEAAGF CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEHHHHHHHHHHCCH EQLATPANGGVCGQATQSATSNFAVNEQVVSTTTLEASSPKAKTAKLVATVTAATSPSGS HHHCCCCCCCCCCCCHHHCCCCCEECCEEEEEEEECCCCCCCHHEEEEEEEEECCCCCCC VDFFEGETQVANDVPLVSGAATFTATGVTPGEHTYTAVFNPSEGSTVDPSEGEDTVSVKT EEEECCCCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEE SATVSETFPAAVAAGAKAKGTVTVVGDGATATGKVTIMQGAKVLKSATLKGGKATFTLKL CCCHHHHCCHHHHCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEE AKGKNKLKAVYGGNAAVAGAKKSFTIKQK ECCCCEEEEEECCCEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA