| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715164
Identifier: 119715164
GI number: 119715164
Start: 964472
End: 965458
Strand: Direct
Name: 119715164
Synonym: Noca_0919
Alternate gene names: NA
Gene position: 964472-965458 (Clockwise)
Preceding gene: 119715163
Following gene: 119715165
Centisome position: 19.34
GC content: 75.08
Gene sequence:
>987_bases ATGACCATGACCCTCGAGAAGCCGGTGCGCCCGCGGCGGGCACTGCTCAAGGTGCCCGGAGCCGCGTCGCGGCCGGGCGG GAGCCGGAAGCAGCCGGAGCGACCGGCTCGTACGGCCCGGCGCCCCGCGCGCCCGGTGGGCCCGCCGACGGGCGCGGACG CCGCGTCGTCGGTGCTGTCATCCGCGTTCACGATGATCGCGATCGTCTGCCTGTGGGTGGCCGCGCAGCTGTTGTTCCTC GGCTCGATCTCCCAGAACCGGGCCCAGGACCTGCTCTACGACGAGCTCCGCGCCGACCTGGCGGCGGCGACCGCGCCGCT CGGCCCGGTCGTGCCGGTGGGCGACCCGGTCGCGCTGCTGACGATCCCGAGCATCGGCGTCGAGCAGGTGGTCGTCGAAG GCACCGCCTCCGGTGACCTGCTCGACGGCCCCGGCCACCGGCGCGACACCGTGCTGCCGGGCCAGGTGGGCACCTCGGTG GTCTACGGCCGCGCCGCCACGTACGGCGCCCCCTTCGCCGACCTGCCCGACCTGCGGGCCGGCGACGAGGTCGAGGTCAC CGGGGCGCAGGGCCGGACGACGTACACGGTCCTCGGCGTGCGTCGCGCCGGCGACCCCCTGCCGCAACCGGTCGCGGACG GCTCGGCGCGCCTGACGCTGGTCACCGCCGAGGGCAGCGGGCGCCTGGGGGCGATCACGCCGGAGTCCGTCGTGTACGTC GACGCCGATGCGACCAAGGCGTTCCCCGCACCGCCCGGACGACCCGGCGCGGTCCCCGATTCGGAGAAGGCGATGGCCGC CGACGACGGAGCACTGCCGCTCCTCGCGCTGTGCCTGGCCCTCCTCCTGGCGCTGACCCTCGGGGTCGTCGCCGCTCGTC AGCGATGGTCGACGGCGCTCGTGTGGGTGGTCGCAAGCCCGCTCGCGATCGCGCTGTCCTGGGCCGCCACGGATGTGGTG ATGCGACTGCTGCCCAACTTGATCTGA
Upstream 100 bases:
>100_bases TGGCCGGCGGCCTGCTGCCGCTGCTGATCCTGCTCGGGGCGATCGGCTGCGTGGCCGCGACCGCGCTGCGAGTGGCCGCA CCGGTGGTCCGGAGGCGGCG
Downstream 100 bases:
>100_bases CCCGACCAGCCGCCTCGGGGCGGTGCAGGAGTGAACACCCGAAAACGCAGCACCCATCACAGGAAGCGAATCAGGATGTT TGTACGCAAGACCCTTGCGG
Product: peptidase C60, sortase A and B
Products: NA
Alternate protein names: Sortase Family Protein
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTMTLEKPVRPRRALLKVPGAASRPGGSRKQPERPARTARRPARPVGPPTGADAASSVLSSAFTMIAIVCLWVAAQLLFL GSISQNRAQDLLYDELRADLAAATAPLGPVVPVGDPVALLTIPSIGVEQVVVEGTASGDLLDGPGHRRDTVLPGQVGTSV VYGRAATYGAPFADLPDLRAGDEVEVTGAQGRTTYTVLGVRRAGDPLPQPVADGSARLTLVTAEGSGRLGAITPESVVYV DADATKAFPAPPGRPGAVPDSEKAMAADDGALPLLALCLALLLALTLGVVAARQRWSTALVWVVASPLAIALSWAATDVV MRLLPNLI
Sequences:
>Translated_328_residues MTMTLEKPVRPRRALLKVPGAASRPGGSRKQPERPARTARRPARPVGPPTGADAASSVLSSAFTMIAIVCLWVAAQLLFL GSISQNRAQDLLYDELRADLAAATAPLGPVVPVGDPVALLTIPSIGVEQVVVEGTASGDLLDGPGHRRDTVLPGQVGTSV VYGRAATYGAPFADLPDLRAGDEVEVTGAQGRTTYTVLGVRRAGDPLPQPVADGSARLTLVTAEGSGRLGAITPESVVYV DADATKAFPAPPGRPGAVPDSEKAMAADDGALPLLALCLALLLALTLGVVAARQRWSTALVWVVASPLAIALSWAATDVV MRLLPNLI >Mature_327_residues TMTLEKPVRPRRALLKVPGAASRPGGSRKQPERPARTARRPARPVGPPTGADAASSVLSSAFTMIAIVCLWVAAQLLFLG SISQNRAQDLLYDELRADLAAATAPLGPVVPVGDPVALLTIPSIGVEQVVVEGTASGDLLDGPGHRRDTVLPGQVGTSVV YGRAATYGAPFADLPDLRAGDEVEVTGAQGRTTYTVLGVRRAGDPLPQPVADGSARLTLVTAEGSGRLGAITPESVVYVD ADATKAFPAPPGRPGAVPDSEKAMAADDGALPLLALCLALLLALTLGVVAARQRWSTALVWVVASPLAIALSWAATDVVM RLLPNLI
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33796; Mature: 33665
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTLEKPVRPRRALLKVPGAASRPGGSRKQPERPARTARRPARPVGPPTGADAASSVLS CCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH SAFTMIAIVCLWVAAQLLFLGSISQNRAQDLLYDELRADLAAATAPLGPVVPVGDPVALL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE TIPSIGVEQVVVEGTASGDLLDGPGHRRDTVLPGQVGTSVVYGRAATYGAPFADLPDLRA EECCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCC GDEVEVTGAQGRTTYTVLGVRRAGDPLPQPVADGSARLTLVTAEGSGRLGAITPESVVYV CCEEEEECCCCCEEEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCEEEE DADATKAFPAPPGRPGAVPDSEKAMAADDGALPLLALCLALLLALTLGVVAARQRWSTAL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWVVASPLAIALSWAATDVVMRLLPNLI HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TMTLEKPVRPRRALLKVPGAASRPGGSRKQPERPARTARRPARPVGPPTGADAASSVLS CCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH SAFTMIAIVCLWVAAQLLFLGSISQNRAQDLLYDELRADLAAATAPLGPVVPVGDPVALL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE TIPSIGVEQVVVEGTASGDLLDGPGHRRDTVLPGQVGTSVVYGRAATYGAPFADLPDLRA EECCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCC GDEVEVTGAQGRTTYTVLGVRRAGDPLPQPVADGSARLTLVTAEGSGRLGAITPESVVYV CCEEEEECCCCCEEEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCEEEE DADATKAFPAPPGRPGAVPDSEKAMAADDGALPLLALCLALLLALTLGVVAARQRWSTAL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWVVASPLAIALSWAATDVVMRLLPNLI HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA