| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715163
Identifier: 119715163
GI number: 119715163
Start: 961920
End: 964475
Strand: Direct
Name: 119715163
Synonym: Noca_0918
Alternate gene names: NA
Gene position: 961920-964475 (Clockwise)
Preceding gene: 119715162
Following gene: 119715164
Centisome position: 19.29
GC content: 72.07
Gene sequence:
>2556_bases GTGAGGCGGGTGCTCGCCCTGGTGCTGCTCCTCGCCGGGCTGGCCGTGCCCGCCGGCGCGGTCGCCGTGCCCGCAGCCGG CCCCGACCAGCGGAAGGCCGAGGGCGGCTGGAGCGCGACCAAGACGCTGACCCGGCAGTTCGTCCAGCCGGACGGATCGA CGTACTCGCTCCCGAGCCACACGGTCACCGTCACCGCGGACGAGACGAAGAACCTGCGCGGCCGGCAGCGGATCCTGATC AGCTGGAAGGGCGCCCAGCCCAGTGGCGGGCGCGCGAGCAACCCGTACGGCGAGAACGGGCTCAACCAGGAGTACCCGGT CGTCATCATGCAGTGCCGGGGGTTGGACGACCCGTCGCTGCCGCAGAAGCAGCGGCTCTCGCCCTCGACCTGCTGGACCG CCTCGGTGGCCCAGCGCTCGCAGATCACCCGGTCCGACGGCGAGGCGTCGTGGGTCCACGACCTCGAGGCGACCCCCGAG GACAAGGGCCGGGTCACCGGCCTCGACCCGTTCCCCTCCGCCGAGGAGTGCCCGACCGCGGACATCGACCCCTACTACAC GCGGCTCACCCCGTTCGTGACCGCGAAGGGCCGGACGTTCGCCGCCTGCGACGCCGGCCACATGCCGCCCGAGGCGGCCG TGGGCGCGGCGTTCCCGCCCGCCGAGCTCGCGGCGTTCACCGACACCGACGGCACCGGCTCGGTGCAGTTCGAGGTCCGC AGTGACGTCGAGAACGAGTCGCTGGGCTGCAGCCACGAGGTGGCCTGCTCGGTCGTCGTCATCCCGATCGCCGGGCTCAG CTGCGACCAGCCCAGCAGCCCGATGAGCCGCTCCGACCTGGCCTGCCGCAAGGGCGGCCGGTTCCCGGCCGGCTCGAGCA ACTTCGCCAACGAGGGTGTCGACCAGGCCGTCTCGCCCGCCTTGTGGTGGTCGGCCTCGAACTGGCGGAACCGGTTCTCG ATCCCGATCACCTTCGGCCTCCCGCCGGACACCTGCGACGTGCTCGACCCGCGGCCGCCGACCGGCTTCTACGGCTCCGA GCTGCTCGCCCAGGCGGCGCTCCAGTGGGCGCCGGCGTACTGCCTGGACGAGCAGCGGTTCAAGTTCCAGCTCAACCAGA TGTCCGACGAGGCCGGCTGGAACCTGATGGAGAACGGCGGAGGCGCCGCGGCCGAGGTGTCCTCGGAGCACCAGCAGCGC GGCAGCGACCCGGTCGGCTATGCGCCGACGGCGGTGACCGGCTTCTCGATCGGCTATCAGATCGACCGGCCCGACAACGC CGGCGAGCTCACCGACCTGCGTCTCAACGCCCGGCTGCTCGCCAAGCTGGTGACCCAGTCCTACCTCGGGTCCGACCTCG GTCGCGGACATCCGGGCATCGGGGGCAACCCGCTGGCGATCATGAACGACCCGGAGTTCATCAAGCTCAACCCGGGCCTC AGCCAGATCACCCAGGAGGCCGGGGCCACGGTCCTCTCGCTGTCGAACTCCTCCGACGTGATCGAGCAGCTGACCGACTA CATCGCCCACGACCAGGACGCGATGGCGTTCATCCACGGCAAGAAGGACCCGTGGGGGATGGCCGTCAACCCGAAGTACC GGAACCTCGAGATGCCGCGCGCGGACATCCCGTTGCTCGACACCTATGTCCCCGAGACGTCGAGCGACTGCCGCCAGAAG AACCCGGGGGTGTACTTCAACCAGATCGCCGCACCGGTGACGACGCTGCGCAAGATCGCCGAGGCGCTGCTGGATGCCTG GCCGAACGTGCAGACCCGGTGCGACTTCGACACCAGCACCGGCCTGTACAAGCTCGGCCGGATCGACCGCCAGTCCTTCG GCTCCCGGTTCATGCTCGGGATCGTCAGCCTCGGCGACGCCGACCGGTACGGCCTGCGCTCCGCGGCCCTCGAGACGAAG CCCGGGACGTACGTCGCCCCCGACCACCGCTCGCTCGCTGCCGCGGTCGCGCTCGCGGATCGGGACCGGGCGCACCGCCC GTTCGTCCTCGACCAGGGCGACGTGCACAGGTCCGGCCAGGCCTACCCGGGCACGATGGTCGTCTACACCGCCGCCCGGC TGCGGAACCTCCCGGAGCAGGATGCCACCAAGGTCGCCCAGTTCATCCGGGTCGCCACGACGGAGGGCCAGCGGGCCGGC AGCGGCAACGGCCAGCTGCCCGGCGGGTACCTGCCGATCCAGAAGTCGGGTGTGACCGCCAAGCTGTTCGACGCCGCGCA GGAGACCGCGGACGCGATCGAGGCGCAGCGCACGAAGCCGAGTCCGCCGACCGACGGGCCCGACGCCGACGGTCCGGGCA GCGGGGAAGTCGTCGCACCCCCCGCCGTACCGGGTGACGACGTGCCGGCCACCGAGCCCGCTCCCTCCGTGGCGCCCACC GTGCCGCCGACCGCGGTGGAGATGCCGGCCACCGAGCCGGTCGGGTCCAACCTGGCCGGCGGCCTGCTGCCGCTGCTGAT CCTGCTCGGGGCGATCGGCTGCGTGGCCGCGACCGCGCTGCGAGTGGCCGCACCGGTGGTCCGGAGGCGGCGATGA
Upstream 100 bases:
>100_bases AGCTGCTGGCGCTGGTGCTGCTCCCGGGCTTCTACGTCGCCGCGCTGCGGCGCCGCCGGGTCTCGACGGGCTCGACCACC GGAAAGACAGGGGGGCGGCC
Downstream 100 bases:
>100_bases CCATGACCCTCGAGAAGCCGGTGCGCCCGCGGCGGGCACTGCTCAAGGTGCCCGGAGCCGCGTCGCGGCCGGGCGGGAGC CGGAAGCAGCCGGAGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 851; Mature: 851
Protein sequence:
>851_residues MRRVLALVLLLAGLAVPAGAVAVPAAGPDQRKAEGGWSATKTLTRQFVQPDGSTYSLPSHTVTVTADETKNLRGRQRILI SWKGAQPSGGRASNPYGENGLNQEYPVVIMQCRGLDDPSLPQKQRLSPSTCWTASVAQRSQITRSDGEASWVHDLEATPE DKGRVTGLDPFPSAEECPTADIDPYYTRLTPFVTAKGRTFAACDAGHMPPEAAVGAAFPPAELAAFTDTDGTGSVQFEVR SDVENESLGCSHEVACSVVVIPIAGLSCDQPSSPMSRSDLACRKGGRFPAGSSNFANEGVDQAVSPALWWSASNWRNRFS IPITFGLPPDTCDVLDPRPPTGFYGSELLAQAALQWAPAYCLDEQRFKFQLNQMSDEAGWNLMENGGGAAAEVSSEHQQR GSDPVGYAPTAVTGFSIGYQIDRPDNAGELTDLRLNARLLAKLVTQSYLGSDLGRGHPGIGGNPLAIMNDPEFIKLNPGL SQITQEAGATVLSLSNSSDVIEQLTDYIAHDQDAMAFIHGKKDPWGMAVNPKYRNLEMPRADIPLLDTYVPETSSDCRQK NPGVYFNQIAAPVTTLRKIAEALLDAWPNVQTRCDFDTSTGLYKLGRIDRQSFGSRFMLGIVSLGDADRYGLRSAALETK PGTYVAPDHRSLAAAVALADRDRAHRPFVLDQGDVHRSGQAYPGTMVVYTAARLRNLPEQDATKVAQFIRVATTEGQRAG SGNGQLPGGYLPIQKSGVTAKLFDAAQETADAIEAQRTKPSPPTDGPDADGPGSGEVVAPPAVPGDDVPATEPAPSVAPT VPPTAVEMPATEPVGSNLAGGLLPLLILLGAIGCVAATALRVAAPVVRRRR
Sequences:
>Translated_851_residues MRRVLALVLLLAGLAVPAGAVAVPAAGPDQRKAEGGWSATKTLTRQFVQPDGSTYSLPSHTVTVTADETKNLRGRQRILI SWKGAQPSGGRASNPYGENGLNQEYPVVIMQCRGLDDPSLPQKQRLSPSTCWTASVAQRSQITRSDGEASWVHDLEATPE DKGRVTGLDPFPSAEECPTADIDPYYTRLTPFVTAKGRTFAACDAGHMPPEAAVGAAFPPAELAAFTDTDGTGSVQFEVR SDVENESLGCSHEVACSVVVIPIAGLSCDQPSSPMSRSDLACRKGGRFPAGSSNFANEGVDQAVSPALWWSASNWRNRFS IPITFGLPPDTCDVLDPRPPTGFYGSELLAQAALQWAPAYCLDEQRFKFQLNQMSDEAGWNLMENGGGAAAEVSSEHQQR GSDPVGYAPTAVTGFSIGYQIDRPDNAGELTDLRLNARLLAKLVTQSYLGSDLGRGHPGIGGNPLAIMNDPEFIKLNPGL SQITQEAGATVLSLSNSSDVIEQLTDYIAHDQDAMAFIHGKKDPWGMAVNPKYRNLEMPRADIPLLDTYVPETSSDCRQK NPGVYFNQIAAPVTTLRKIAEALLDAWPNVQTRCDFDTSTGLYKLGRIDRQSFGSRFMLGIVSLGDADRYGLRSAALETK PGTYVAPDHRSLAAAVALADRDRAHRPFVLDQGDVHRSGQAYPGTMVVYTAARLRNLPEQDATKVAQFIRVATTEGQRAG SGNGQLPGGYLPIQKSGVTAKLFDAAQETADAIEAQRTKPSPPTDGPDADGPGSGEVVAPPAVPGDDVPATEPAPSVAPT VPPTAVEMPATEPVGSNLAGGLLPLLILLGAIGCVAATALRVAAPVVRRRR >Mature_851_residues MRRVLALVLLLAGLAVPAGAVAVPAAGPDQRKAEGGWSATKTLTRQFVQPDGSTYSLPSHTVTVTADETKNLRGRQRILI SWKGAQPSGGRASNPYGENGLNQEYPVVIMQCRGLDDPSLPQKQRLSPSTCWTASVAQRSQITRSDGEASWVHDLEATPE DKGRVTGLDPFPSAEECPTADIDPYYTRLTPFVTAKGRTFAACDAGHMPPEAAVGAAFPPAELAAFTDTDGTGSVQFEVR SDVENESLGCSHEVACSVVVIPIAGLSCDQPSSPMSRSDLACRKGGRFPAGSSNFANEGVDQAVSPALWWSASNWRNRFS IPITFGLPPDTCDVLDPRPPTGFYGSELLAQAALQWAPAYCLDEQRFKFQLNQMSDEAGWNLMENGGGAAAEVSSEHQQR GSDPVGYAPTAVTGFSIGYQIDRPDNAGELTDLRLNARLLAKLVTQSYLGSDLGRGHPGIGGNPLAIMNDPEFIKLNPGL SQITQEAGATVLSLSNSSDVIEQLTDYIAHDQDAMAFIHGKKDPWGMAVNPKYRNLEMPRADIPLLDTYVPETSSDCRQK NPGVYFNQIAAPVTTLRKIAEALLDAWPNVQTRCDFDTSTGLYKLGRIDRQSFGSRFMLGIVSLGDADRYGLRSAALETK PGTYVAPDHRSLAAAVALADRDRAHRPFVLDQGDVHRSGQAYPGTMVVYTAARLRNLPEQDATKVAQFIRVATTEGQRAG SGNGQLPGGYLPIQKSGVTAKLFDAAQETADAIEAQRTKPSPPTDGPDADGPGSGEVVAPPAVPGDDVPATEPAPSVAPT VPPTAVEMPATEPVGSNLAGGLLPLLILLGAIGCVAATALRVAAPVVRRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90425; Mature: 90425
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLALVLLLAGLAVPAGAVAVPAAGPDQRKAEGGWSATKTLTRQFVQPDGSTYSLPSH CHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCC TVTVTADETKNLRGRQRILISWKGAQPSGGRASNPYGENGLNQEYPVVIMQCRGLDDPSL EEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC PQKQRLSPSTCWTASVAQRSQITRSDGEASWVHDLEATPEDKGRVTGLDPFPSAEECPTA CHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCC DIDPYYTRLTPFVTAKGRTFAACDAGHMPPEAAVGAAFPPAELAAFTDTDGTGSVQFEVR CCCCHHHHHCCEEEECCCEEEECCCCCCCCHHHCCCCCCHHHHEEEECCCCCCEEEEEEC SDVENESLGCSHEVACSVVVIPIAGLSCDQPSSPMSRSDLACRKGGRFPAGSSNFANEGV CCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCH DQAVSPALWWSASNWRNRFSIPITFGLPPDTCDVLDPRPPTGFYGSELLAQAALQWAPAY HHHCCCHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH CLDEQRFKFQLNQMSDEAGWNLMENGGGAAAEVSSEHQQRGSDPVGYAPTAVTGFSIGYQ HCCCHHHHHHHHHHCHHHCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE IDRPDNAGELTDLRLNARLLAKLVTQSYLGSDLGRGHPGIGGNPLAIMNDPEFIKLNPGL ECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCH SQITQEAGATVLSLSNSSDVIEQLTDYIAHDQDAMAFIHGKKDPWGMAVNPKYRNLEMPR HHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCCC ADIPLLDTYVPETSSDCRQKNPGVYFNQIAAPVTTLRKIAEALLDAWPNVQTRCDFDTST CCCCHHCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC GLYKLGRIDRQSFGSRFMLGIVSLGDADRYGLRSAALETKPGTYVAPDHRSLAAAVALAD CHHHHHCCCHHHHCCEEEEEEEECCCCCHHCHHHHHCCCCCCCEECCCCHHHHHHHHHHH RDRAHRPFVLDQGDVHRSGQAYPGTMVVYTAARLRNLPEQDATKVAQFIRVATTEGQRAG CCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC SGNGQLPGGYLPIQKSGVTAKLFDAAQETADAIEAQRTKPSPPTDGPDADGPGSGEVVAP CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC PAVPGDDVPATEPAPSVAPTVPPTAVEMPATEPVGSNLAGGLLPLLILLGAIGCVAATAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVAAPVVRRRR HHHHHHHHCCC >Mature Secondary Structure MRRVLALVLLLAGLAVPAGAVAVPAAGPDQRKAEGGWSATKTLTRQFVQPDGSTYSLPSH CHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCC TVTVTADETKNLRGRQRILISWKGAQPSGGRASNPYGENGLNQEYPVVIMQCRGLDDPSL EEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC PQKQRLSPSTCWTASVAQRSQITRSDGEASWVHDLEATPEDKGRVTGLDPFPSAEECPTA CHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCC DIDPYYTRLTPFVTAKGRTFAACDAGHMPPEAAVGAAFPPAELAAFTDTDGTGSVQFEVR CCCCHHHHHCCEEEECCCEEEECCCCCCCCHHHCCCCCCHHHHEEEECCCCCCEEEEEEC SDVENESLGCSHEVACSVVVIPIAGLSCDQPSSPMSRSDLACRKGGRFPAGSSNFANEGV CCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCH DQAVSPALWWSASNWRNRFSIPITFGLPPDTCDVLDPRPPTGFYGSELLAQAALQWAPAY HHHCCCHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH CLDEQRFKFQLNQMSDEAGWNLMENGGGAAAEVSSEHQQRGSDPVGYAPTAVTGFSIGYQ HCCCHHHHHHHHHHCHHHCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE IDRPDNAGELTDLRLNARLLAKLVTQSYLGSDLGRGHPGIGGNPLAIMNDPEFIKLNPGL ECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCH SQITQEAGATVLSLSNSSDVIEQLTDYIAHDQDAMAFIHGKKDPWGMAVNPKYRNLEMPR HHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCCC ADIPLLDTYVPETSSDCRQKNPGVYFNQIAAPVTTLRKIAEALLDAWPNVQTRCDFDTST CCCCHHCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC GLYKLGRIDRQSFGSRFMLGIVSLGDADRYGLRSAALETKPGTYVAPDHRSLAAAVALAD CHHHHHCCCHHHHCCEEEEEEEECCCCCHHCHHHHHCCCCCCCEECCCCHHHHHHHHHHH RDRAHRPFVLDQGDVHRSGQAYPGTMVVYTAARLRNLPEQDATKVAQFIRVATTEGQRAG CCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC SGNGQLPGGYLPIQKSGVTAKLFDAAQETADAIEAQRTKPSPPTDGPDADGPGSGEVVAP CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC PAVPGDDVPATEPAPSVAPTVPPTAVEMPATEPVGSNLAGGLLPLLILLGAIGCVAATAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVAAPVVRRRR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA