| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yjeE [C]
Identifier: 119715147
GI number: 119715147
Start: 943196
End: 943642
Strand: Direct
Name: yjeE [C]
Synonym: Noca_0902
Alternate gene names: 119715147
Gene position: 943196-943642 (Clockwise)
Preceding gene: 119715146
Following gene: 119715148
Centisome position: 18.92
GC content: 73.83
Gene sequence:
>447_bases ATGCGCGGCCTCGGCCGCTCGCTGGCCGGCCAGCTCACGGCCGGCGACCTGATCGTGCTGACCGGTGAGCTCGGCGCCGG CAAGACGACCTTCACCCAGGGGTTGGGTGCGGGGCTCGGCGTGCGCGGTGACATCACCTCCCCGACGTTCGTGATCGCAC GCGTGCACCCGTCGCTGGTCGGTGGCCCCGACCTCGTGCACGTGGACGCGTACCGCCTCGGTGGCCTCGCCGAGCTCGAC GACCTCGACCTGGACGCCTCCCTCGACGACGCCGTCACGGTGGTCGAGTGGGGGGAGGGGCTCGCCGAGGGCCTGACCGA GTCGCGCCTGGAGGTCGTGATCGTCCGCGGTGAGGAGGAGCGCGCGGACGGCCTCGATCCCCGGCGGGTCGAGCTCACGC CGGTCGGGCCGCGGTGGCATGCGCTGTCCTTCCGCGCGCTCGGATAG
Upstream 100 bases:
>100_bases GCAGCGGCAGGGGTTCCGCGAGATCAGCCGGGCCGCGCCGAACGTCGAGCTGCGCCGGCCGCTGCGCACCCACGCCTTCC AGGCGCCGGACGCCGACGCG
Downstream 100 bases:
>100_bases CCTCACCGGGTGCCCACCAACGCGAAGCTCGTGATCGTGACCGGCTCCGGGCGCAGTGGCACCAGCAGTGTCGCCGGCAC CCTCAAGCGCCTGGGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MRGLGRSLAGQLTAGDLIVLTGELGAGKTTFTQGLGAGLGVRGDITSPTFVIARVHPSLVGGPDLVHVDAYRLGGLAELD DLDLDASLDDAVTVVEWGEGLAEGLTESRLEVVIVRGEEERADGLDPRRVELTPVGPRWHALSFRALG
Sequences:
>Translated_148_residues MRGLGRSLAGQLTAGDLIVLTGELGAGKTTFTQGLGAGLGVRGDITSPTFVIARVHPSLVGGPDLVHVDAYRLGGLAELD DLDLDASLDDAVTVVEWGEGLAEGLTESRLEVVIVRGEEERADGLDPRRVELTPVGPRWHALSFRALG >Mature_148_residues MRGLGRSLAGQLTAGDLIVLTGELGAGKTTFTQGLGAGLGVRGDITSPTFVIARVHPSLVGGPDLVHVDAYRLGGLAELD DLDLDASLDDAVTVVEWGEGLAEGLTESRLEVVIVRGEEERADGLDPRRVELTPVGPRWHALSFRALG
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=126, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 15493; Mature: 15493
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLGRSLAGQLTAGDLIVLTGELGAGKTTFTQGLGAGLGVRGDITSPTFVIARVHPSLV CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC GGPDLVHVDAYRLGGLAELDDLDLDASLDDAVTVVEWGEGLAEGLTESRLEVVIVRGEEE CCCCEEEECCEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEEEECCCH RADGLDPRRVELTPVGPRWHALSFRALG HCCCCCCCEEEEEECCCCEEEEEEEECC >Mature Secondary Structure MRGLGRSLAGQLTAGDLIVLTGELGAGKTTFTQGLGAGLGVRGDITSPTFVIARVHPSLV CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC GGPDLVHVDAYRLGGLAELDDLDLDASLDDAVTVVEWGEGLAEGLTESRLEVVIVRGEEE CCCCEEEECCEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEEEECCCH RADGLDPRRVELTPVGPRWHALSFRALG HCCCCCCCEEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]