| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715146
Identifier: 119715146
GI number: 119715146
Start: 941634
End: 942716
Strand: Direct
Name: 119715146
Synonym: Noca_0901
Alternate gene names: NA
Gene position: 941634-942716 (Clockwise)
Preceding gene: 119715145
Following gene: 119715147
Centisome position: 18.89
GC content: 74.05
Gene sequence:
>1083_bases GTGAGGCTCCGCACGCACCTGATCGGTGCCACCGCGACCGCGGTCGGCATCGCCGCGGGCGCCGGCGCCGGGGTCGCCCG GCAGCGCCGCGCCATCGCGCGCCGCTCGCCCGGCGACAGCCCGGCCTTCGGCTCGCTGCGCTCGGAGCCGGTCACCGTCG TCGCCGACGACGGCACCCCACTGCACGTCGAGGTCGACGAGGCCGACCCCGCCCAGGCCCGGTCGGGCGTCAGCCGGCTG CGCCGCCGACGCCCGCCGGTGACCATCGTGTTCTGCCACGGCTACGCGCTGAACCTGGACTGCTGGCACTTCCAGCGCGA GCACTACCGCGGCCGGGTGCGCACCGTGTTCTACGACCAGCGCTCCCACGGACGCTCCGGCCGCTCCCCGCTGGGCAACG CGACCATCGAGCAGCTCGGCCAGGACCTGCTGACCGTGCTCGACGCCGTCGCGCCGGAGGGGCCGGTCGTGCTGGTCGGC CACTCGATGGGCGGGATGACGATCGTCGCGCTGGCCGAGGAGCACCCCGAGCTGTTCGGCGACCGGGTCGTCGGCACCGC CCTGATCTCCACCACGGCCGGCGGGCTGGACCCCAGCCGGATCCTGTTCCCGATGGTGCCGCCGTGGGCCGGCGGTGGAG TGCTCCACCGCAGTGTCGCGACGCTCGCGCGCGGGCATCGCGCCGTCGACGGGCTGCGCCGGGTCGGCCGCGACGTCGCG ATGGTCGCGACCGACGAGCTGGCGTTCGGGGACGCGGTGCCGGGCAGCTACGTCGAGTTCGTCGACCGGATGCTCTCGGC GACCCCGTTCGAGGTGGTCGCGGAGTTCTTCCCCGGCTTCCGCGGCCTCGACAAGTTCCACGCCGTCGAGGTGCTCTCGA AGGTGCCGACCGCCGTCATCTGCGGCACCGAGGACCGGCTCACCTCGATCGGGCACAGCCGCAAGCTGCACGCCTGGATC GACGGCTCCACCCTGCTCGAGTGCCACGGCGCCGGGCACATGGTGATCCTCGAGCGGTACGACGAGGTCAACGGCGAGCT CGACCGGATGCTGGAGGTCAGTGGCGCGGTGGACCCCCGGTGA
Upstream 100 bases:
>100_bases GCGAGCCGACCGTCCAGGAGTGGGCCGACGCGGCCGGCACCATCTCCTACGAGATCATCAGCAGGATCGGGGGCCGGATG AGCAGGAGGTACGTCGACTC
Downstream 100 bases:
>100_bases CGGCCCGGCCGCAGCTGAGCATCCGCCGGGTCGGTCCCGAGTCCGCCGCGCAGGTGCTCGACGTCGTGCTCGCCGCGTTC CAGGCGCGCCCGCCGCTCGA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Lipase; Alpha/Beta Hydrolase; Thioesterase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Hydrolase Alpha/Beta Fold; 3-Oxoadipate Enol-Lactone Hydrolase; Lysophospholipase; 3-Oxoadipate Enol-Lactonase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Family Hydrolase; Alpha/Beta Superfamily-Like Protein; Alpha/Beta Hydrolase Fold Containing Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Family Hydrolase; Non-Heme Haloperoxidase Hpx
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MRLRTHLIGATATAVGIAAGAGAGVARQRRAIARRSPGDSPAFGSLRSEPVTVVADDGTPLHVEVDEADPAQARSGVSRL RRRRPPVTIVFCHGYALNLDCWHFQREHYRGRVRTVFYDQRSHGRSGRSPLGNATIEQLGQDLLTVLDAVAPEGPVVLVG HSMGGMTIVALAEEHPELFGDRVVGTALISTTAGGLDPSRILFPMVPPWAGGGVLHRSVATLARGHRAVDGLRRVGRDVA MVATDELAFGDAVPGSYVEFVDRMLSATPFEVVAEFFPGFRGLDKFHAVEVLSKVPTAVICGTEDRLTSIGHSRKLHAWI DGSTLLECHGAGHMVILERYDEVNGELDRMLEVSGAVDPR
Sequences:
>Translated_360_residues MRLRTHLIGATATAVGIAAGAGAGVARQRRAIARRSPGDSPAFGSLRSEPVTVVADDGTPLHVEVDEADPAQARSGVSRL RRRRPPVTIVFCHGYALNLDCWHFQREHYRGRVRTVFYDQRSHGRSGRSPLGNATIEQLGQDLLTVLDAVAPEGPVVLVG HSMGGMTIVALAEEHPELFGDRVVGTALISTTAGGLDPSRILFPMVPPWAGGGVLHRSVATLARGHRAVDGLRRVGRDVA MVATDELAFGDAVPGSYVEFVDRMLSATPFEVVAEFFPGFRGLDKFHAVEVLSKVPTAVICGTEDRLTSIGHSRKLHAWI DGSTLLECHGAGHMVILERYDEVNGELDRMLEVSGAVDPR >Mature_360_residues MRLRTHLIGATATAVGIAAGAGAGVARQRRAIARRSPGDSPAFGSLRSEPVTVVADDGTPLHVEVDEADPAQARSGVSRL RRRRPPVTIVFCHGYALNLDCWHFQREHYRGRVRTVFYDQRSHGRSGRSPLGNATIEQLGQDLLTVLDAVAPEGPVVLVG HSMGGMTIVALAEEHPELFGDRVVGTALISTTAGGLDPSRILFPMVPPWAGGGVLHRSVATLARGHRAVDGLRRVGRDVA MVATDELAFGDAVPGSYVEFVDRMLSATPFEVVAEFFPGFRGLDKFHAVEVLSKVPTAVICGTEDRLTSIGHSRKLHAWI DGSTLLECHGAGHMVILERYDEVNGELDRMLEVSGAVDPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38692; Mature: 38692
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRTHLIGATATAVGIAAGAGAGVARQRRAIARRSPGDSPAFGSLRSEPVTVVADDGTP CCCCHHEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCE LHVEVDEADPAQARSGVSRLRRRRPPVTIVFCHGYALNLDCWHFQREHYRGRVRTVFYDQ EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCHHHHHHHHHHCCEEEEEEEEC RSHGRSGRSPLGNATIEQLGQDLLTVLDAVAPEGPVVLVGHSMGGMTIVALAEEHPELFG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEHHCHHHHH DRVVGTALISTTAGGLDPSRILFPMVPPWAGGGVLHRSVATLARGHRAVDGLRRVGRDVA HHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE MVATDELAFGDAVPGSYVEFVDRMLSATPFEVVAEFFPGFRGLDKFHAVEVLSKVPTAVI EEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEE CGTEDRLTSIGHSRKLHAWIDGSTLLECHGAGHMVILERYDEVNGELDRMLEVSGAVDPR ECCHHHHHHCCCCCEEEEEECCCEEEEECCCCCEEEEECCHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MRLRTHLIGATATAVGIAAGAGAGVARQRRAIARRSPGDSPAFGSLRSEPVTVVADDGTP CCCCHHEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCE LHVEVDEADPAQARSGVSRLRRRRPPVTIVFCHGYALNLDCWHFQREHYRGRVRTVFYDQ EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCHHHHHHHHHHCCEEEEEEEEC RSHGRSGRSPLGNATIEQLGQDLLTVLDAVAPEGPVVLVGHSMGGMTIVALAEEHPELFG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEHHCHHHHH DRVVGTALISTTAGGLDPSRILFPMVPPWAGGGVLHRSVATLARGHRAVDGLRRVGRDVA HHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE MVATDELAFGDAVPGSYVEFVDRMLSATPFEVVAEFFPGFRGLDKFHAVEVLSKVPTAVI EEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEE CGTEDRLTSIGHSRKLHAWIDGSTLLECHGAGHMVILERYDEVNGELDRMLEVSGAVDPR ECCHHHHHHCCCCCEEEEEECCCEEEEECCCCCEEEEECCHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA