| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is katG
Identifier: 119715120
GI number: 119715120
Start: 913103
End: 915385
Strand: Direct
Name: katG
Synonym: Noca_0875
Alternate gene names: 119715120
Gene position: 913103-915385 (Clockwise)
Preceding gene: 119715119
Following gene: 119715124
Centisome position: 18.31
GC content: 70.87
Gene sequence:
>2283_bases ATGACCGACAGCCAGGACAACCGCACCCCCGAGAGCCCGCAGGGCGTCGACCGGAAGGCGGAGGGTGGGTGCCCCGTCCT CCACGACGGGGTGACCGCCCAGGGCAGCGAGAGCGAGAACCCGGCGATCGACTCACCGACGCCCAGGACCGGCGGCCGCC CGAACTCGCTCAAGGACTGGTGGCCCAACCACCTCGACCTCTCGGTCCTGCACGCGCACTCCTCGAAGAGCAGCCCGCTC GACCCCGGCTTCCGCTACTCCGAGGAGTTCGAGAAGCTCGACATCGAGGCGCTCCGGCGCGACATCGTCGAGGTGCTGCA CACCTCGCAGGACTGGTGGCCGGCCGACTTCGGCCACTACGGCGGCCTGTTCGTCCGGATGGCCTGGCACGCGGCCGGTA CCTACCGGATCCACGACGGTCGAGGTGGCGCCGGGCAGGGCGCCCAGCGGTTCGCCCCGCTCAACAGCTGGCCGGACAAC GCGAACCTGGACAAGGCGCGGCGGCTGCTCTGGCCGGTCAAGCAGAAGCACGGCCAGAAGATCTCGTGGGCCGACCTGAT CGTGTTCGCCGGCAACGTCGCCCTCGAGGACATGGGCTTCACGACCTTCGGCTTCGGCTTCGGTCGGGAGGACATCTGGG AGCCCGAGGAGATCTACTGGGGCCCGGAGGACACCTGGCTCGGCGACGAGCGCTACAGCGGCGACCGGGAGCTGTCCAAC CCGCTGGGCGCGGTCCAGATGGGGCTGATCTACGTCAACCCGGAGGGCCCGAACGGCAACCCGGACCCGCTGGCCTCGGC CCGCGACATCCGCGAGACCTTCGCGCGGATGGCGATGAACGACGAGGAGACCGTCGCGCTGATCGCCGGCGGTCACACCT TCGGCAAGACCCACGGCGCCGGTGACGCCGACCTGGTCGGCCCCGAGCCGGAGGCCGCACCGCTCGAGGCGCAGGGCCTG GGCTGGCACAGCTCGTTCGGCTCCGGCAAGGGCGAGGACACGATCACCTCGGGCATCGAGGTGACCTGGACCTACCACCC GACCCGCTGGGACAACGAGTTCTTCCACATCCTGTACGCCTACGAGTGGGAGCTGATGAAGTCCGCGGCCGGCGCCAACC AGTGGCGGCCGAAGAACGGCGCGGGCGCGGACATGGTGCCCGACGCGCACGACCCGTCGAAGCGGCGCGAGCCGCGGATG CTGACCTCCGACCTGGCGCTGCGCTTCGACCCGGAGTACGCCAAGATCTCGAGCCGGTTCAAGGACCACCCCGAGGAGTT CGCGCTGGCCTTCGCGAAGGCCTGGTACAAGCTGCTGCACCGTGACCTCGGGCCGATCGCCCGCTACCTCGGTCCGCTCG TGGGCGAGACCCAGATCTGGCAGGACCCGGTCCCGGCCGTCGACCACGAGCTCGTCAGCGACGACGACGTCGCGGCGCTC AAGGCGAAGGTCCTCGACTCGGGCCTCTCGGTCGCCGAGCTGGTGTCCACCGCGTGGGCCTCGGCCGCGAGCTTCCGCTC CACCGACAAGCGCGGCGGCGCGAACGGCGCACGGATCCGGCTGGAGCCGCAGCGCAGCTGGGCGGTCAACCAGCCCGAGC AGCTGGCCGGCGTGCTCGATCGGCTCGAGGGCATCCAGCGCGAGTTCAACGAGGCCGGGGGCGCGAAGATCTCGCTGGCC GACCTGATCGTGCTCGCCGGGTCCGCGGCGGTGGAGAAGGCTGCCAAGGACGGTGGGGTCGACGTGACCGTGCCGTTCCG CGCGGGCCGCACCGACGCCAGCCAGGAGCAGACCGACGTCGACTCGTTCGCGGTGCTCGAGCCGCGGGCCGACGGCTTCC GCAACTACCTGCTGGAGAACGAGAAGGCCCAACCGGAGGTCCTGCTGGTCGAGCGCGCCTACCTGCTCGGCCTCACCGCC CCCGAGATGACCGTCCTGGTCGGGGGACTGCGCGCCCTCGGCAACAACGTCGGCGGCAGCGGGCACGGCGTGCTGACCGA CCGCCCCGGCGTGCTGACCAACGACTTCTTCGCCAACCTGCTGGCGCCCGGCGCGCAGTGGAAGGCGTCGGAGTCAGAGG CCAACGTCTACGAGATCCGCGACCTCGCCAGCGGGGAGCTGCGCTGGACCGCGACCGCGGTCGACCTGATCTTCGGATCG AACTCCCAGCTGCGCTCGCTGGCCGAGGTCTACGCCAGCGCGGACGCCCGGGAGAAGTTCGTGCGCGACTTCGTCGCGGC CTGGGTCAAGGTCATGGACGCCGACCGCTTCGACCTGGCCTGA
Upstream 100 bases:
>100_bases GGCTTCCGCATCGACGAGGCCGAGGTCGTCTACTGGGGCATCTGCCCCGCCTGCTCGACCACCCGATCGTGACCGCCAAC GCCCGTCCGGAAGGAAGACC
Downstream 100 bases:
>100_bases GCCTCGTTCCACCGATTTGCGGCGTCGCGAGCGTCACCAGATGGGTGCGCTGGCAAGGCGTCCGGCGCGAAGGCATACCA GGGCGTCTATCGAGCGTCGG
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 760; Mature: 759
Protein sequence:
>760_residues MTDSQDNRTPESPQGVDRKAEGGCPVLHDGVTAQGSESENPAIDSPTPRTGGRPNSLKDWWPNHLDLSVLHAHSSKSSPL DPGFRYSEEFEKLDIEALRRDIVEVLHTSQDWWPADFGHYGGLFVRMAWHAAGTYRIHDGRGGAGQGAQRFAPLNSWPDN ANLDKARRLLWPVKQKHGQKISWADLIVFAGNVALEDMGFTTFGFGFGREDIWEPEEIYWGPEDTWLGDERYSGDRELSN PLGAVQMGLIYVNPEGPNGNPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDADLVGPEPEAAPLEAQGL GWHSSFGSGKGEDTITSGIEVTWTYHPTRWDNEFFHILYAYEWELMKSAAGANQWRPKNGAGADMVPDAHDPSKRREPRM LTSDLALRFDPEYAKISSRFKDHPEEFALAFAKAWYKLLHRDLGPIARYLGPLVGETQIWQDPVPAVDHELVSDDDVAAL KAKVLDSGLSVAELVSTAWASAASFRSTDKRGGANGARIRLEPQRSWAVNQPEQLAGVLDRLEGIQREFNEAGGAKISLA DLIVLAGSAAVEKAAKDGGVDVTVPFRAGRTDASQEQTDVDSFAVLEPRADGFRNYLLENEKAQPEVLLVERAYLLGLTA PEMTVLVGGLRALGNNVGGSGHGVLTDRPGVLTNDFFANLLAPGAQWKASESEANVYEIRDLASGELRWTATAVDLIFGS NSQLRSLAEVYASADAREKFVRDFVAAWVKVMDADRFDLA
Sequences:
>Translated_760_residues MTDSQDNRTPESPQGVDRKAEGGCPVLHDGVTAQGSESENPAIDSPTPRTGGRPNSLKDWWPNHLDLSVLHAHSSKSSPL DPGFRYSEEFEKLDIEALRRDIVEVLHTSQDWWPADFGHYGGLFVRMAWHAAGTYRIHDGRGGAGQGAQRFAPLNSWPDN ANLDKARRLLWPVKQKHGQKISWADLIVFAGNVALEDMGFTTFGFGFGREDIWEPEEIYWGPEDTWLGDERYSGDRELSN PLGAVQMGLIYVNPEGPNGNPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDADLVGPEPEAAPLEAQGL GWHSSFGSGKGEDTITSGIEVTWTYHPTRWDNEFFHILYAYEWELMKSAAGANQWRPKNGAGADMVPDAHDPSKRREPRM LTSDLALRFDPEYAKISSRFKDHPEEFALAFAKAWYKLLHRDLGPIARYLGPLVGETQIWQDPVPAVDHELVSDDDVAAL KAKVLDSGLSVAELVSTAWASAASFRSTDKRGGANGARIRLEPQRSWAVNQPEQLAGVLDRLEGIQREFNEAGGAKISLA DLIVLAGSAAVEKAAKDGGVDVTVPFRAGRTDASQEQTDVDSFAVLEPRADGFRNYLLENEKAQPEVLLVERAYLLGLTA PEMTVLVGGLRALGNNVGGSGHGVLTDRPGVLTNDFFANLLAPGAQWKASESEANVYEIRDLASGELRWTATAVDLIFGS NSQLRSLAEVYASADAREKFVRDFVAAWVKVMDADRFDLA >Mature_759_residues TDSQDNRTPESPQGVDRKAEGGCPVLHDGVTAQGSESENPAIDSPTPRTGGRPNSLKDWWPNHLDLSVLHAHSSKSSPLD PGFRYSEEFEKLDIEALRRDIVEVLHTSQDWWPADFGHYGGLFVRMAWHAAGTYRIHDGRGGAGQGAQRFAPLNSWPDNA NLDKARRLLWPVKQKHGQKISWADLIVFAGNVALEDMGFTTFGFGFGREDIWEPEEIYWGPEDTWLGDERYSGDRELSNP LGAVQMGLIYVNPEGPNGNPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDADLVGPEPEAAPLEAQGLG WHSSFGSGKGEDTITSGIEVTWTYHPTRWDNEFFHILYAYEWELMKSAAGANQWRPKNGAGADMVPDAHDPSKRREPRML TSDLALRFDPEYAKISSRFKDHPEEFALAFAKAWYKLLHRDLGPIARYLGPLVGETQIWQDPVPAVDHELVSDDDVAALK AKVLDSGLSVAELVSTAWASAASFRSTDKRGGANGARIRLEPQRSWAVNQPEQLAGVLDRLEGIQREFNEAGGAKISLAD LIVLAGSAAVEKAAKDGGVDVTVPFRAGRTDASQEQTDVDSFAVLEPRADGFRNYLLENEKAQPEVLLVERAYLLGLTAP EMTVLVGGLRALGNNVGGSGHGVLTDRPGVLTNDFFANLLAPGAQWKASESEANVYEIRDLASGELRWTATAVDLIFGSN SQLRSLAEVYASADAREKFVRDFVAAWVKVMDADRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=713, Percent_Identity=58.2047685834502, Blast_Score=795, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_NOCSJ (A1SF13)
Other databases:
- EMBL: CP000509 - RefSeq: YP_922085.1 - ProteinModelPortal: A1SF13 - SMR: A1SF13 - STRING: A1SF13 - PeroxiBase: 2691 - GeneID: 4599882 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_0875 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: FEWELTK - PhylomeDB: A1SF13 - ProtClustDB: PRK15061 - BioCyc: NSP35761:NOCA_0875-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 83222; Mature: 83091
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 130-130
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSQDNRTPESPQGVDRKAEGGCPVLHDGVTAQGSESENPAIDSPTPRTGGRPNSLKDW CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH WPNHLDLSVLHAHSSKSSPLDPGFRYSEEFEKLDIEALRRDIVEVLHTSQDWWPADFGHY CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GGLFVRMAWHAAGTYRIHDGRGGAGQGAQRFAPLNSWPDNANLDKARRLLWPVKQKHGQK CCEEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC ISWADLIVFAGNVALEDMGFTTFGFGFGREDIWEPEEIYWGPEDTWLGDERYSGDRELSN CCHHEEEEEECCEEEECCCCEEECCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHCC PLGAVQMGLIYVNPEGPNGNPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGA CCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC GDADLVGPEPEAAPLEAQGLGWHSSFGSGKGEDTITSGIEVTWTYHPTRWDNEFFHILYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCEEEEEEE YEWELMKSAAGANQWRPKNGAGADMVPDAHDPSKRREPRMLTSDLALRFDPEYAKISSRF HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHEEEECCHHHHHHHHH KDHPEEFALAFAKAWYKLLHRDLGPIARYLGPLVGETQIWQDPVPAVDHELVSDDDVAAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHH KAKVLDSGLSVAELVSTAWASAASFRSTDKRGGANGARIRLEPQRSWAVNQPEQLAGVLD HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH RLEGIQREFNEAGGAKISLADLIVLAGSAAVEKAAKDGGVDVTVPFRAGRTDASQEQTDV HHHHHHHHHHHCCCCEEEHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCC DSFAVLEPRADGFRNYLLENEKAQPEVLLVERAYLLGLTAPEMTVLVGGLRALGNNVGGS CCEEEECCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCC GHGVLTDRPGVLTNDFFANLLAPGAQWKASESEANVYEIRDLASGELRWTATAVDLIFGS CCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEEEECC NSQLRSLAEVYASADAREKFVRDFVAAWVKVMDADRFDLA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure TDSQDNRTPESPQGVDRKAEGGCPVLHDGVTAQGSESENPAIDSPTPRTGGRPNSLKDW CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH WPNHLDLSVLHAHSSKSSPLDPGFRYSEEFEKLDIEALRRDIVEVLHTSQDWWPADFGHY CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GGLFVRMAWHAAGTYRIHDGRGGAGQGAQRFAPLNSWPDNANLDKARRLLWPVKQKHGQK CCEEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC ISWADLIVFAGNVALEDMGFTTFGFGFGREDIWEPEEIYWGPEDTWLGDERYSGDRELSN CCHHEEEEEECCEEEECCCCEEECCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHCC PLGAVQMGLIYVNPEGPNGNPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGA CCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC GDADLVGPEPEAAPLEAQGLGWHSSFGSGKGEDTITSGIEVTWTYHPTRWDNEFFHILYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCEEEEEEE YEWELMKSAAGANQWRPKNGAGADMVPDAHDPSKRREPRMLTSDLALRFDPEYAKISSRF HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHEEEECCHHHHHHHHH KDHPEEFALAFAKAWYKLLHRDLGPIARYLGPLVGETQIWQDPVPAVDHELVSDDDVAAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHH KAKVLDSGLSVAELVSTAWASAASFRSTDKRGGANGARIRLEPQRSWAVNQPEQLAGVLD HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH RLEGIQREFNEAGGAKISLADLIVLAGSAAVEKAAKDGGVDVTVPFRAGRTDASQEQTDV HHHHHHHHHHHCCCCEEEHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCC DSFAVLEPRADGFRNYLLENEKAQPEVLLVERAYLLGLTAPEMTVLVGGLRALGNNVGGS CCEEEECCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCC GHGVLTDRPGVLTNDFFANLLAPGAQWKASESEANVYEIRDLASGELRWTATAVDLIFGS CCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEEEECC NSQLRSLAEVYASADAREKFVRDFVAAWVKVMDADRFDLA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA