Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is yqgN [H]
Identifier: 119715036
GI number: 119715036
Start: 833135
End: 833719
Strand: Reverse
Name: yqgN [H]
Synonym: Noca_0789
Alternate gene names: 119715036
Gene position: 833719-833135 (Counterclockwise)
Preceding gene: 119715043
Following gene: 119715034
Centisome position: 16.72
GC content: 77.78
Gene sequence:
>585_bases GTGACGGGCACCCAATCACCCGCGAAGTCGGCGGTCCGCGACCGCCTCCTCACCACCCGGCACCGCCGACCGCTGGCCGA GGTCGGCGTCGCGGCCCGGGCGATCGCCGAGCACCTGCTGGCGCTGCCGGAGGTGCGCCGGGCGGCCACGGTCGCGGCGT ACGTCTCGGTCGGCAGCGAGCCGGGCAGCGGCCCGCTGCTGGCCGGGCTGCGCGCCGCGGGCAAGCGGGTGCTGCTCCCG GTGGTGCTGCCCGACCTCGACCTGGACTGGGCGGCGTACGACGGCCCGGACCACCTGGTGCCGGCGCGGCGCGGCCTGCT CGAGCCGGACGCGGAGCGGCTCGGTCCAGAGGCGATCGGCACCGCGGACGTGGTGCTGACGCCCGGCCTGGCCGTGTCAC CCTCCGGGGTCCGGCTCGGCCGCGGCGGCGGCTGCTACGACCGGGCCCTCGGCCGAGTGCCGGTCGGCACCTTCACCTGC GTGCTGCTCTACGACGGGGAGGTCGGCCTCGACGTGCCGGTCGAGCCCCACGACCGTCCGGTGCTGTTCGCGGCGACCCC CTCGGGGGTCGTCCGCCTGGGTTGA
Upstream 100 bases:
>100_bases AAGGTCTCGATGGCGACCTCGTCGACCCCCGCGGCCGCCATCTTGTCGCGTGCCCGGTTCAAGCCAGCGCTTCCCATGCT CACGATCGTAGGCTTCCCCT
Downstream 100 bases:
>100_bases GGCGGTCGGGTCGCGGGACCGCGGCATCGACCTATCCGTCGGCGGCCGGGGTCAGCGTGAGCCGGTCGCCACCGGCGTCG GCGACCGCGTCGCGGGTGAA
Product: 5-formyltetrahydrofolate cyclo-ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTGTQSPAKSAVRDRLLTTRHRRPLAEVGVAARAIAEHLLALPEVRRAATVAAYVSVGSEPGSGPLLAGLRAAGKRVLLP VVLPDLDLDWAAYDGPDHLVPARRGLLEPDAERLGPEAIGTADVVLTPGLAVSPSGVRLGRGGGCYDRALGRVPVGTFTC VLLYDGEVGLDVPVEPHDRPVLFAATPSGVVRLG
Sequences:
>Translated_194_residues MTGTQSPAKSAVRDRLLTTRHRRPLAEVGVAARAIAEHLLALPEVRRAATVAAYVSVGSEPGSGPLLAGLRAAGKRVLLP VVLPDLDLDWAAYDGPDHLVPARRGLLEPDAERLGPEAIGTADVVLTPGLAVSPSGVRLGRGGGCYDRALGRVPVGTFTC VLLYDGEVGLDVPVEPHDRPVLFAATPSGVVRLG >Mature_193_residues TGTQSPAKSAVRDRLLTTRHRRPLAEVGVAARAIAEHLLALPEVRRAATVAAYVSVGSEPGSGPLLAGLRAAGKRVLLPV VLPDLDLDWAAYDGPDHLVPARRGLLEPDAERLGPEAIGTADVVLTPGLAVSPSGVRLGRGGGCYDRALGRVPVGTFTCV LLYDGEVGLDVPVEPHDRPVLFAATPSGVVRLG
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]
Homologues:
Organism=Escherichia coli, GI1789278, Length=186, Percent_Identity=34.4086021505376, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002698 [H]
Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]
EC number: NA
Molecular weight: Translated: 20138; Mature: 20007
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTQSPAKSAVRDRLLTTRHRRPLAEVGVAARAIAEHLLALPEVRRAATVAAYVSVGSE CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC PGSGPLLAGLRAAGKRVLLPVVLPDLDLDWAAYDGPDHLVPARRGLLEPDAERLGPEAIG CCCCHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCCCHHHHCCCCCCHHHCCCCCCC TADVVLTPGLAVSPSGVRLGRGGGCYDRALGRVPVGTFTCVLLYDGEVGLDVPVEPHDRP CCEEEECCCCEECCCCEEECCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCE VLFAATPSGVVRLG EEEEECCCCEEECC >Mature Secondary Structure TGTQSPAKSAVRDRLLTTRHRRPLAEVGVAARAIAEHLLALPEVRRAATVAAYVSVGSE CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC PGSGPLLAGLRAAGKRVLLPVVLPDLDLDWAAYDGPDHLVPARRGLLEPDAERLGPEAIG CCCCHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCCCHHHHCCCCCCHHHCCCCCCC TADVVLTPGLAVSPSGVRLGRGGGCYDRALGRVPVGTFTCVLLYDGEVGLDVPVEPHDRP CCEEEECCCCEECCCCEEECCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCE VLFAATPSGVVRLG EEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]