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The map label for this gene is fliY [H]

Identifier: 119714992

GI number: 119714992

Start: 793340

End: 794080

Strand: Reverse

Name: fliY [H]

Synonym: Noca_0745

Alternate gene names: 119714992

Gene position: 794080-793340 (Counterclockwise)

Preceding gene: 119714993

Following gene: 119714991

Centisome position: 15.93

GC content: 74.9

Gene sequence:

>741_bases
ATGACCACCGTGCAGACCACCGTCGACCTCGAGCTGGCGGTCAGCGCCGCGACCGCCGCCATCGCAGTGCTGCCGGCCGC
AGAGCCCCTCACCGCCGGTGCGCCGCGACCGGGGGACGCGGCTGCCGACGCGGGATTCGCGGGCGCTGTGGTCGCGGATC
TCGACGGGCGGACCTCGGCCCGGCTCACGGTGCTGGTGGGCCCGGAGCTGGTCTCCGCACTGGCGGCGAGCCCGATCGGA
GACCTGGACCTCGCGGCCGCGCTGCAGCCCAGCCTGGACGCCGCTGCCACGGCTCTCGGTGCCCGGTCCGGTGCCGCGCG
TCAGGTCGATCCCGACACGGTGGTCGACGAGATCGCCGAGCCGTTCGTCATCGTCCCGTTGGAGGGGAGCGACGTCGTCG
CCGCCCTCCTGGTGCCCGAGGCGCTGCTCGCCCACCCCGCCGACGACACACCTGCGCTGCCCACCACCTCGGCCGCGGCG
CCGACCGGTGACCGGCGCGGCATCGAGATGCTGCACGGCGTCGACATGGAGGTCACGGTCGAGATCGGCCGCGCCCGGAT
GACGGTGCGCGAGCTGCTCGACCTGGCGCCCGGGGCCGTCCTCGAGCTCGACCGCGCGGCGGGCAGCCCGGCCGACCTGC
TGGTCAACGGCCGGCTGATCGCGCGGGGCGAGGTCGTCGTCATCGACGAGGACTTCGGGCTCCGGATCACCGAGATCGTC
ACCGACTCCACGGCCGGCTGA

Upstream 100 bases:

>100_bases
TCGAGGTCGTCGTCGACGGCACCTGTTTCGCGCACGCCACCCCCGGGACCAGCGGATTCCGGCTCGCCGCCCTGATCGTG
GGCACCCCGAAGGAGAACGC

Downstream 100 bases:

>100_bases
CATGCTCGAGCTCACCGTCCGCCTCCTGGTCTCGCTCTCCCTGGTGATCGGGCTGCTCCTGCTGCTCGCCCGGTTCGGCG
GGCGACGCTTCCGCGGGGGC

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: CheY-P phosphatase FliY [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTTVQTTVDLELAVSAATAAIAVLPAAEPLTAGAPRPGDAAADAGFAGAVVADLDGRTSARLTVLVGPELVSALAASPIG
DLDLAAALQPSLDAAATALGARSGAARQVDPDTVVDEIAEPFVIVPLEGSDVVAALLVPEALLAHPADDTPALPTTSAAA
PTGDRRGIEMLHGVDMEVTVEIGRARMTVRELLDLAPGAVLELDRAAGSPADLLVNGRLIARGEVVVIDEDFGLRITEIV
TDSTAG

Sequences:

>Translated_246_residues
MTTVQTTVDLELAVSAATAAIAVLPAAEPLTAGAPRPGDAAADAGFAGAVVADLDGRTSARLTVLVGPELVSALAASPIG
DLDLAAALQPSLDAAATALGARSGAARQVDPDTVVDEIAEPFVIVPLEGSDVVAALLVPEALLAHPADDTPALPTTSAAA
PTGDRRGIEMLHGVDMEVTVEIGRARMTVRELLDLAPGAVLELDRAAGSPADLLVNGRLIARGEVVVIDEDFGLRITEIV
TDSTAG
>Mature_245_residues
TTVQTTVDLELAVSAATAAIAVLPAAEPLTAGAPRPGDAAADAGFAGAVVADLDGRTSARLTVLVGPELVSALAASPIGD
LDLAAALQPSLDAAATALGARSGAARQVDPDTVVDEIAEPFVIVPLEGSDVVAALLVPEALLAHPADDTPALPTTSAAAP
TGDRRGIEMLHGVDMEVTVEIGRARMTVRELLDLAPGAVLELDRAAGSPADLLVNGRLIARGEVVVIDEDFGLRITEIVT
DSTAG

Specific function: Component of the flagellar switch. Binds CheY-P and increases its hydrolysis rate in vitro. May function constitutively to remove CheY-P around the flagellar switch to maintain an optimal level of CheY-P whereas CheC may function after addition of an attr

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note=The switch is localized at the base of the flagellar motor, in or near the C-ring, attached to the MS-ring (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=80, Percent_Identity=48.75, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007597
- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF04509 CheC; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 24682; Mature: 24551

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVQTTVDLELAVSAATAAIAVLPAAEPLTAGAPRPGDAAADAGFAGAVVADLDGRTSA
CCEEEEEEEEEEHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCE
RLTVLVGPELVSALAASPIGDLDLAAALQPSLDAAATALGARSGAARQVDPDTVVDEIAE
EEEEEECHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
PFVIVPLEGSDVVAALLVPEALLAHPADDTPALPTTSAAAPTGDRRGIEMLHGVDMEVTV
CEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEE
EIGRARMTVRELLDLAPGAVLELDRAAGSPADLLVNGRLIARGEVVVIDEDFGLRITEIV
EECHHHHHHHHHHHHCCCCEEEEHHCCCCCHHEEEECEEEECCEEEEEECCCCCEEEEEE
TDSTAG
CCCCCC
>Mature Secondary Structure 
TTVQTTVDLELAVSAATAAIAVLPAAEPLTAGAPRPGDAAADAGFAGAVVADLDGRTSA
CEEEEEEEEEEHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCE
RLTVLVGPELVSALAASPIGDLDLAAALQPSLDAAATALGARSGAARQVDPDTVVDEIAE
EEEEEECHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
PFVIVPLEGSDVVAALLVPEALLAHPADDTPALPTTSAAAPTGDRRGIEMLHGVDMEVTV
CEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEE
EIGRARMTVRELLDLAPGAVLELDRAAGSPADLLVNGRLIARGEVVVIDEDFGLRITEIV
EECHHHHHHHHHHHHCCCCEEEEHHCCCCCHHEEEECEEEECCEEEEEECCCCCEEEEEE
TDSTAG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447979; 9384377; 1898932 [H]