| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714963
Identifier: 119714963
GI number: 119714963
Start: 760154
End: 761194
Strand: Reverse
Name: 119714963
Synonym: Noca_0716
Alternate gene names: NA
Gene position: 761194-760154 (Counterclockwise)
Preceding gene: 119714964
Following gene: 119714940
Centisome position: 15.27
GC content: 70.03
Gene sequence:
>1041_bases ATGACCACCCGGGCCACCCGACTCGTGGCGCTCGCGGTGCCACTGCTCCTCGCGCTGCCCGCCCTCGCCGTGGCCCCGAC CTACGCCGGCGGTACCGCGGCGAGCTCGGCCCGGGCGAAGCAGCGGCAGGTCCAGCAGTCCAAGCGGATCGTCGTCAAGT GGCAGGGCTTCCAGAAGCGGCCGAAGTACCAGAAGGTCGCCGACGTGCCGGGGATCGGTCAGGTCGAGCTGATCTGCCGG CCCGACAACACGATGCTGCGGATCCGGGCCAACGACCGGCGGGCCGAGACCCAGCTGTGGATGGCCAAGCTCGAGAACAA GGACGGCACCGACCGGGTCGCGGTCAAGAACGTCCGGATCTACACCTACGCGACGGCGGCCGACGACGGGAAGGGCGGCA CCGGGCCCCAGGCGCACGAAGGCCTGAACCAGAAGACCCCGATCGAGGACTTCGCGAAGGGCTCGGCGTACGGCGTGATC AGTCAGCGCCCCGGCCGCGACCAGCCGGGGGGCGGTCCGATGACGATACCGGCGACCTCGTTCCAGCTCACCTGGTACTG GGAGCGGTTCGCCTACCCGGGCAGCCAGTACTGCAAGATGACGCTCGCGCTGCGGACCGACACCGACCAGCAGCTGGGGC TGAGCTGGCACGGCGACGACGAGGCGGCGACCCAGCAGACCGCGACCGCCAGCATCCCCGGATTCGGCCGGGCCGAGCTG CGCTGCGAGACCGGCCGCACCGGCGAGCAGACGGTGGCGCTGCGCCCCGACGACCCGGACTCGTTCATGGACTACGAGTA CATCCAGGGCGAGGGACGGGTCGACGACCCGGACCACATCACCCACTACAGCGATCTCGAGTACGACCCCGAGACCGGGC TGCTCGGGCCGGTCGACCTCCCGCGCAACGGGATGATGCGCATCTGGTGGTCCGTCGGCGGGGTGAAGAGGACGTGGGTG CTCTCGTCCTACATGGTCACCAACAATGTCGCCAGGCCCTACCTCAACCTGTGCGAGGTCGCGGCCACTCCGCTGCGCTG A
Upstream 100 bases:
>100_bases AGCAGTCCTGGCTCACCGGGGACCAGGCGCCGCAGCTCTACGTGCCCGACGACAACGCGAGCACGCCGATCCAGCCGGTG CAGAGCGAGAAGCCTGCGCG
Downstream 100 bases:
>100_bases GGGCCTCGCGGACCAGCGGGAGCACCGGCCGCTGCCCCGACTCGATCTCGGCGAGAGGCACCCAGGCGACCTCCGCCGAG GTGCCGCCCTGCTCCGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTTRATRLVALAVPLLLALPALAVAPTYAGGTAASSARAKQRQVQQSKRIVVKWQGFQKRPKYQKVADVPGIGQVELICR PDNTMLRIRANDRRAETQLWMAKLENKDGTDRVAVKNVRIYTYATAADDGKGGTGPQAHEGLNQKTPIEDFAKGSAYGVI SQRPGRDQPGGGPMTIPATSFQLTWYWERFAYPGSQYCKMTLALRTDTDQQLGLSWHGDDEAATQQTATASIPGFGRAEL RCETGRTGEQTVALRPDDPDSFMDYEYIQGEGRVDDPDHITHYSDLEYDPETGLLGPVDLPRNGMMRIWWSVGGVKRTWV LSSYMVTNNVARPYLNLCEVAATPLR
Sequences:
>Translated_346_residues MTTRATRLVALAVPLLLALPALAVAPTYAGGTAASSARAKQRQVQQSKRIVVKWQGFQKRPKYQKVADVPGIGQVELICR PDNTMLRIRANDRRAETQLWMAKLENKDGTDRVAVKNVRIYTYATAADDGKGGTGPQAHEGLNQKTPIEDFAKGSAYGVI SQRPGRDQPGGGPMTIPATSFQLTWYWERFAYPGSQYCKMTLALRTDTDQQLGLSWHGDDEAATQQTATASIPGFGRAEL RCETGRTGEQTVALRPDDPDSFMDYEYIQGEGRVDDPDHITHYSDLEYDPETGLLGPVDLPRNGMMRIWWSVGGVKRTWV LSSYMVTNNVARPYLNLCEVAATPLR >Mature_345_residues TTRATRLVALAVPLLLALPALAVAPTYAGGTAASSARAKQRQVQQSKRIVVKWQGFQKRPKYQKVADVPGIGQVELICRP DNTMLRIRANDRRAETQLWMAKLENKDGTDRVAVKNVRIYTYATAADDGKGGTGPQAHEGLNQKTPIEDFAKGSAYGVIS QRPGRDQPGGGPMTIPATSFQLTWYWERFAYPGSQYCKMTLALRTDTDQQLGLSWHGDDEAATQQTATASIPGFGRAELR CETGRTGEQTVALRPDDPDSFMDYEYIQGEGRVDDPDHITHYSDLEYDPETGLLGPVDLPRNGMMRIWWSVGGVKRTWVL SSYMVTNNVARPYLNLCEVAATPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38269; Mature: 38137
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRATRLVALAVPLLLALPALAVAPTYAGGTAASSARAKQRQVQQSKRIVVKWQGFQKR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCC PKYQKVADVPGIGQVELICRPDNTMLRIRANDRRAETQLWMAKLENKDGTDRVAVKNVRI CCHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEE YTYATAADDGKGGTGPQAHEGLNQKTPIEDFAKGSAYGVISQRPGRDQPGGGPMTIPATS EEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCE FQLTWYWERFAYPGSQYCKMTLALRTDTDQQLGLSWHGDDEAATQQTATASIPGFGRAEL EEEEEEEHHHCCCCCHHEEEEEEEECCCCHHCCCEECCCCHHHHHHHHCCCCCCCCCEEE RCETGRTGEQTVALRPDDPDSFMDYEYIQGEGRVDDPDHITHYSDLEYDPETGLLGPVDL EECCCCCCCEEEEECCCCCCHHCCCCEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC PRNGMMRIWWSVGGVKRTWVLSSYMVTNNVARPYLNLCEVAATPLR CCCCCEEEEEECCCEEEEEEEEEHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TTRATRLVALAVPLLLALPALAVAPTYAGGTAASSARAKQRQVQQSKRIVVKWQGFQKR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCC PKYQKVADVPGIGQVELICRPDNTMLRIRANDRRAETQLWMAKLENKDGTDRVAVKNVRI CCHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEE YTYATAADDGKGGTGPQAHEGLNQKTPIEDFAKGSAYGVISQRPGRDQPGGGPMTIPATS EEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCE FQLTWYWERFAYPGSQYCKMTLALRTDTDQQLGLSWHGDDEAATQQTATASIPGFGRAEL EEEEEEEHHHCCCCCHHEEEEEEEECCCCHHCCCEECCCCHHHHHHHHCCCCCCCCCEEE RCETGRTGEQTVALRPDDPDSFMDYEYIQGEGRVDDPDHITHYSDLEYDPETGLLGPVDL EECCCCCCCEEEEECCCCCCHHCCCCEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC PRNGMMRIWWSVGGVKRTWVLSSYMVTNNVARPYLNLCEVAATPLR CCCCCEEEEEECCCEEEEEEEEEHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA