Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is sphX [H]

Identifier: 119714964

GI number: 119714964

Start: 761191

End: 762633

Strand: Reverse

Name: sphX [H]

Synonym: Noca_0717

Alternate gene names: 119714964

Gene position: 762633-761191 (Counterclockwise)

Preceding gene: 119714965

Following gene: 119714963

Centisome position: 15.3

GC content: 71.1

Gene sequence:

>1443_bases
GTGACACGCACCCGCTCGAAGCTGCTCGGCTCCCTGGCGGTGGCCGCGGTCTCGCTGGGCCTGCTCACGGCCTGCTCGGA
CCCGTCGCAGGAGGCCACCGACTCGGTCAGCCAGGACCAGGCCAACGAGTTCCGCGAGAACCAGCTGCGGCAGAAGGACA
TCGACAAGGCGTACGCCGCGCTGCCGACCCGGCCCTCCGGCGTCGTCGGCATCGACGGCTCGACGACGGGGTCGCTGACC
CCGACCGAGGTCAGGAGCTACGAGGCCACCGCGAACGCGGCCCAGGTCAACGTCGCGGACAACGGCGAGGACCAGGCCTT
CCAGGAGCTGTGTGCGGGCCAGATCGACCTCGTGGACTCGGCCCGTCCGATCAGCCGTGCCGAGTGGGAGGCCTGTCAGG
CCGTCGGCCTCGACGTGGTGCAGTTCCAGGTCGCTGCGGAGGCGATCGTGATCGCGATCAAGTCGGAGACCGACGTCGGC
GCCGACTGCCTCACCGTCGACCAGGTCCGGGACATCTACCGGGCCGGGTCGCCGCTGACGAACTGGAGCCAGCCGCCGCT
CGGCTTCGACGACGTGCCGCTGAAGGTGGGCGGACCGAGCCCCGACAACAACGGCTTCGGCTTCTTCGGCCGCTACGTGC
TCGGCGCGCCCGAGCCCTCCCAGGTCGACCTGCGCTCCGACTACTTCCTGGCCGAGAACGACGAGGCGGCTCGCAAGTTC
GTGGTCGGCAAGCGGAACATCGAGCTGCGGGCGGCGCGCTTCGACGACGTCAGCCGTCGCCGCGCCCAGGCCAACCAGGC
GCTCCAGGACGCACGCAGCGAGATGATCGCCGCCCGGGAGGAGCTCGCGGTCGCGCTCGCCGAGCGAGCCAAGGGCATTC
GGGACGGCCGACCGGAGGCGGACAAGGCCAGGGACCAACGGCGGGTCGACAAGGCGTTCGAGCGCCGGACCGCGGCCCGG
ACGCGCCTGGACGCTGCCCAGCAGCGCTACGCCGCCGTCAACGAGGTCTACCGCAACACCGACGAGGCCCGGCGTCTCTA
CCAGGCCTACCACGGCCACGTGGCCTACTTCCGGTTCAGCTACTACGAACTGTTCGAGGACCAGCTGCGGCCCTTCGAGA
TCACCCTGCCCGACGGCCGGCGCAACTGCATCTTCCCGAGCCAGCGGACGATCACCAGCGGTGAGTACCCGCTCGCCCGG
CAGCTGCTGATCACCACCACGACCCGCTCCCTGGCCCGCGCCGAGGTCCGGGACTTCCTCAGCCACTACGTGGCGCACGC
CCAGGCCGGGGCGGACACCGCCCGTCTGGTCGCGCTGCCCGACGAGACGGTGCGGCTCCAGCAGTCCTGGCTCACCGGGG
ACCAGGCGCCGCAGCTCTACGTGCCCGACGACAACGCGAGCACGCCGATCCAGCCGGTGCAGAGCGAGAAGCCTGCGCGA
TGA

Upstream 100 bases:

>100_bases
GGTACCACTACCCGCCGGAGGAGGACGAGACCGTCGTCGTGCCGAGCGAGAGCCCGACCGTCCCCCCCTCCAGCTCGCCG
ACCGAGGGAGGTGCGGTCCA

Downstream 100 bases:

>100_bases
CCACCCGGGCCACCCGACTCGTGGCGCTCGCGGTGCCACTGCTCCTCGCGCTGCCCGCCCTCGCCGTGGCCCCGACCTAC
GCCGGCGGTACCGCGGCGAG

Product: phosphate ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTRTRSKLLGSLAVAAVSLGLLTACSDPSQEATDSVSQDQANEFRENQLRQKDIDKAYAALPTRPSGVVGIDGSTTGSLT
PTEVRSYEATANAAQVNVADNGEDQAFQELCAGQIDLVDSARPISRAEWEACQAVGLDVVQFQVAAEAIVIAIKSETDVG
ADCLTVDQVRDIYRAGSPLTNWSQPPLGFDDVPLKVGGPSPDNNGFGFFGRYVLGAPEPSQVDLRSDYFLAENDEAARKF
VVGKRNIELRAARFDDVSRRRAQANQALQDARSEMIAAREELAVALAERAKGIRDGRPEADKARDQRRVDKAFERRTAAR
TRLDAAQQRYAAVNEVYRNTDEARRLYQAYHGHVAYFRFSYYELFEDQLRPFEITLPDGRRNCIFPSQRTITSGEYPLAR
QLLITTTTRSLARAEVRDFLSHYVAHAQAGADTARLVALPDETVRLQQSWLTGDQAPQLYVPDDNASTPIQPVQSEKPAR

Sequences:

>Translated_480_residues
MTRTRSKLLGSLAVAAVSLGLLTACSDPSQEATDSVSQDQANEFRENQLRQKDIDKAYAALPTRPSGVVGIDGSTTGSLT
PTEVRSYEATANAAQVNVADNGEDQAFQELCAGQIDLVDSARPISRAEWEACQAVGLDVVQFQVAAEAIVIAIKSETDVG
ADCLTVDQVRDIYRAGSPLTNWSQPPLGFDDVPLKVGGPSPDNNGFGFFGRYVLGAPEPSQVDLRSDYFLAENDEAARKF
VVGKRNIELRAARFDDVSRRRAQANQALQDARSEMIAAREELAVALAERAKGIRDGRPEADKARDQRRVDKAFERRTAAR
TRLDAAQQRYAAVNEVYRNTDEARRLYQAYHGHVAYFRFSYYELFEDQLRPFEITLPDGRRNCIFPSQRTITSGEYPLAR
QLLITTTTRSLARAEVRDFLSHYVAHAQAGADTARLVALPDETVRLQQSWLTGDQAPQLYVPDDNASTPIQPVQSEKPAR
>Mature_479_residues
TRTRSKLLGSLAVAAVSLGLLTACSDPSQEATDSVSQDQANEFRENQLRQKDIDKAYAALPTRPSGVVGIDGSTTGSLTP
TEVRSYEATANAAQVNVADNGEDQAFQELCAGQIDLVDSARPISRAEWEACQAVGLDVVQFQVAAEAIVIAIKSETDVGA
DCLTVDQVRDIYRAGSPLTNWSQPPLGFDDVPLKVGGPSPDNNGFGFFGRYVLGAPEPSQVDLRSDYFLAENDEAARKFV
VGKRNIELRAARFDDVSRRRAQANQALQDARSEMIAAREELAVALAERAKGIRDGRPEADKARDQRRVDKAFERRTAART
RLDAAQQRYAAVNEVYRNTDEARRLYQAYHGHVAYFRFSYYELFEDQLRPFEITLPDGRRNCIFPSQRTITSGEYPLARQ
LLITTTTRSLARAEVRDFLSHYVAHAQAGADTARLVALPDETVRLQQSWLTGDQAPQLYVPDDNASTPIQPVQSEKPAR

Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53003; Mature: 52872

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTRSKLLGSLAVAAVSLGLLTACSDPSQEATDSVSQDQANEFRENQLRQKDIDKAYAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPTRPSGVVGIDGSTTGSLTPTEVRSYEATANAAQVNVADNGEDQAFQELCAGQIDLVDS
CCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEECCC
ARPISRAEWEACQAVGLDVVQFQVAAEAIVIAIKSETDVGADCLTVDQVRDIYRAGSPLT
CCCCCHHHHHHHHHHCCHHHHHHHHHCEEEEEEECCCCCCCCCEEHHHHHHHHHCCCCCC
NWSQPPLGFDDVPLKVGGPSPDNNGFGFFGRYVLGAPEPSQVDLRSDYFLAENDEAARKF
CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHEEECCCCCCCEECCCCEEEECCCHHHHHH
VVGKRNIELRAARFDDVSRRRAQANQALQDARSEMIAAREELAVALAERAKGIRDGRPEA
HCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DKARDQRRVDKAFERRTAARTRLDAAQQRYAAVNEVYRNTDEARRLYQAYHGHVAYFRFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHH
YYELFEDQLRPFEITLPDGRRNCIFPSQRTITSGEYPLARQLLITTTTRSLARAEVRDFL
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHH
SHYVAHAQAGADTARLVALPDETVRLQQSWLTGDQAPQLYVPDDNASTPIQPVQSEKPAR
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRTRSKLLGSLAVAAVSLGLLTACSDPSQEATDSVSQDQANEFRENQLRQKDIDKAYAA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPTRPSGVVGIDGSTTGSLTPTEVRSYEATANAAQVNVADNGEDQAFQELCAGQIDLVDS
CCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEECCC
ARPISRAEWEACQAVGLDVVQFQVAAEAIVIAIKSETDVGADCLTVDQVRDIYRAGSPLT
CCCCCHHHHHHHHHHCCHHHHHHHHHCEEEEEEECCCCCCCCCEEHHHHHHHHHCCCCCC
NWSQPPLGFDDVPLKVGGPSPDNNGFGFFGRYVLGAPEPSQVDLRSDYFLAENDEAARKF
CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHEEECCCCCCCEECCCCEEEECCCHHHHHH
VVGKRNIELRAARFDDVSRRRAQANQALQDARSEMIAAREELAVALAERAKGIRDGRPEA
HCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DKARDQRRVDKAFERRTAARTRLDAAQQRYAAVNEVYRNTDEARRLYQAYHGHVAYFRFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHH
YYELFEDQLRPFEITLPDGRRNCIFPSQRTITSGEYPLARQLLITTTTRSLARAEVRDFL
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHH
SHYVAHAQAGADTARLVALPDETVRLQQSWLTGDQAPQLYVPDDNASTPIQPVQSEKPAR
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]